RNA–Protein interactions for RNA: ENST00000472107.5

COPS6-207, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 835 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-207ENST00000472107 USP40Q9NVE5 1235 aa22.72■■□□□ 1.23
COPS6-207ENST00000472107 SLC45A1Q9Y2W3 748 aa22.72■■□□□ 1.23
COPS6-207ENST00000472107 SALL2Q9Y467 1007 aaPredicted RBP22.72■■□□□ 1.23
COPS6-207ENST00000472107 MGAMO43451 1857 aa22.71■■□□□ 1.23
COPS6-207ENST00000472107 BMP8BP34820 402 aa22.71■■□□□ 1.23
COPS6-207ENST00000472107 RABL6Q3YEC7 729 aaPredicted RBP22.71■■□□□ 1.23
COPS6-207ENST00000472107 GDF15Q99988 308 aa22.71■■□□□ 1.23
COPS6-207ENST00000472107 SPINK5Q9NQ38 1064 aaPredicted RBP22.71■■□□□ 1.23
COPS6-207ENST00000472107 FAM198AQ9UFP1 575 aa22.71■■□□□ 1.23
COPS6-207ENST00000472107 SLC5A1P13866 664 aa22.7■■□□□ 1.22
COPS6-207ENST00000472107 PTPRAP18433 802 aa22.7■■□□□ 1.22
COPS6-207ENST00000472107 DIS3LQ8TF46 1054 aaKnown RBP22.7■■□□□ 1.22
COPS6-207ENST00000472107 ZMYND8Q9ULU4 1186 aaPredicted RBP22.7■■□□□ 1.22
COPS6-207ENST00000472107 UTYO14607 1347 aa22.69■■□□□ 1.22
COPS6-207ENST00000472107 ZSCAN29Q8IWY8 852 aaPredicted RBP22.69■■□□□ 1.22
COPS6-207ENST00000472107 KLHDC4Q8TBB5 520 aa22.69■■□□□ 1.22
COPS6-207ENST00000472107 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.69■■□□□ 1.22
COPS6-207ENST00000472107 AFG3L2Q9Y4W6 797 aa22.69■■□□□ 1.22
COPS6-207ENST00000472107 LRRFIP2Q9Y608 721 aaKnown RBP22.69■■□□□ 1.22
COPS6-207ENST00000472107 PHF20L1A8MW92 1017 aa22.68■■□□□ 1.22
COPS6-207ENST00000472107 LDHBP07195 334 aaKnown RBP22.68■■□□□ 1.22
COPS6-207ENST00000472107 FGFR2P21802 821 aa22.68■■□□□ 1.22
COPS6-207ENST00000472107 ZFPM1Q8IX07 1006 aa22.68■■□□□ 1.22
COPS6-207ENST00000472107 ANKRD13CQ8N6S4 541 aa22.68■■□□□ 1.22
COPS6-207ENST00000472107 ANKRD44Q8N8A2 993 aa22.68■■□□□ 1.22
COPS6-207ENST00000472107 ANKLE1Q8NAG6 615 aa22.68■■□□□ 1.22
COPS6-207ENST00000472107 STXBP5LQ9Y2K9 1186 aa22.68■■□□□ 1.22
COPS6-207ENST00000472107 TRIM75PA6NK02 468 aa22.67■■□□□ 1.22
COPS6-207ENST00000472107 PRDX5P30044 214 aa22.67■■□□□ 1.22
COPS6-207ENST00000472107 Q7L0L9 218 aa22.67■■□□□ 1.22
COPS6-207ENST00000472107 LPIN2Q92539 896 aa22.67■■□□□ 1.22
COPS6-207ENST00000472107 CCDC184Q52MB2 194 aa22.66■■□□□ 1.22
COPS6-207ENST00000472107 NBPF3Q9H094 633 aa22.66■■□□□ 1.22
COPS6-207ENST00000472107 GNL3LQ9NVN8 582 aaKnown RBP22.66■■□□□ 1.22
COPS6-207ENST00000472107 PNMA3Q9UL41 463 aa22.66■■□□□ 1.22
COPS6-207ENST00000472107 RGS3P49796 1198 aa22.65■■□□□ 1.22
COPS6-207ENST00000472107 LRIT3Q3SXY7 679 aa22.65■■□□□ 1.22
COPS6-207ENST00000472107 AGTPBP1Q9UPW5 1226 aa22.65■■□□□ 1.22
COPS6-207ENST00000472107 CTNND1O60716 968 aaKnown RBP22.64■■□□□ 1.21
COPS6-207ENST00000472107 ENTPD3O75355 529 aa22.64■■□□□ 1.21
COPS6-207ENST00000472107 HMGCRP04035 888 aa22.64■■□□□ 1.21
COPS6-207ENST00000472107 SYN1P17600 705 aa22.64■■□□□ 1.21
COPS6-207ENST00000472107 FAM110CQ1W6H9 321 aa22.64■■□□□ 1.21
COPS6-207ENST00000472107 TDHQ8IZJ6 230 aa22.64■■□□□ 1.21
COPS6-207ENST00000472107 HMX1Q9NP08 348 aaPredicted RBP22.64■■□□□ 1.21
COPS6-207ENST00000472107 MAGEA10P43363 369 aaPredicted RBP22.63■■□□□ 1.21
COPS6-207ENST00000472107 IDI2Q9BXS1 227 aa22.63■■□□□ 1.21
COPS6-207ENST00000472107 C11orf49Q9H6J7 331 aa22.63■■□□□ 1.21
COPS6-207ENST00000472107 MTMR10Q9NXD2 777 aa22.63■■□□□ 1.21
COPS6-207ENST00000472107 ATRNL1Q5VV63 1379 aa22.63■■□□□ 1.21
COPS6-207ENST00000472107 RPTORQ8N122 1335 aa22.62■■□□□ 1.21
COPS6-207ENST00000472107 EYA2O00167 538 aa22.62■■□□□ 1.21
COPS6-207ENST00000472107 UBE2OQ9C0C9 1292 aaKnown RBP22.62■■□□□ 1.21
COPS6-207ENST00000472107 GCLCP48506 637 aaPredicted RBP22.6■■□□□ 1.21
COPS6-207ENST00000472107 TREML2Q5T2D2 321 aa22.6■■□□□ 1.21
COPS6-207ENST00000472107 DENND2AQ9ULE3 1009 aa22.6■■□□□ 1.21
COPS6-207ENST00000472107 ALPK3Q96L96 1907 aa22.6■■□□□ 1.21
COPS6-207ENST00000472107 SALL1Q9NSC2 1324 aa22.59■■□□□ 1.21
COPS6-207ENST00000472107 MYH13Q9UKX3 1938 aa22.59■■□□□ 1.21
COPS6-207ENST00000472107 MAP3K10Q02779 954 aa22.59■■□□□ 1.21
COPS6-207ENST00000472107 SH3BP5LQ7L8J4 393 aa22.59■■□□□ 1.21
COPS6-207ENST00000472107 CCDC84Q86UT8 332 aaPredicted RBP22.59■■□□□ 1.21
COPS6-207ENST00000472107 DDTLA6NHG4 134 aaPredicted RBP22.58■■□□□ 1.21
COPS6-207ENST00000472107 PABPC4Q13310 644 aaKnown RBP eCLIP22.58■■□□□ 1.215e-7■□□□□ 9.8
COPS6-207ENST00000472107 PICALMQ13492 652 aa22.58■■□□□ 1.21
COPS6-207ENST00000472107 ATP2B3Q16720 1220 aa22.58■■□□□ 1.21
COPS6-207ENST00000472107 DZIP1Q86YF9 867 aaKnown RBP22.58■■□□□ 1.21
COPS6-207ENST00000472107 SLF2Q8IX21 1173 aa22.58■■□□□ 1.21
COPS6-207ENST00000472107 ZGPATQ8N5A5 531 aaKnown RBP22.58■■□□□ 1.21
COPS6-207ENST00000472107 PROCA1Q8NCQ7 364 aaPredicted RBP22.58■■□□□ 1.21
COPS6-207ENST00000472107 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.58■■□□□ 1.21
COPS6-207ENST00000472107 DOCK3Q8IZD9 2030 aa22.58■■□□□ 1.2
COPS6-207ENST00000472107 DOCK2Q92608 1830 aa22.57■■□□□ 1.2
COPS6-207ENST00000472107 SEMA3EO15041 775 aa22.57■■□□□ 1.2
COPS6-207ENST00000472107 COL25A1Q9BXS0 654 aaPredicted RBP22.57■■□□□ 1.2
COPS6-207ENST00000472107 SLURP2P0DP57 97 aa22.56■■□□□ 1.2
COPS6-207ENST00000472107 TRIM32Q13049 653 aa22.56■■□□□ 1.2
COPS6-207ENST00000472107 CEP126Q9P2H0 1117 aa22.56■■□□□ 1.2
COPS6-207ENST00000472107 OGDHLQ9ULD0 1010 aa22.56■■□□□ 1.2
COPS6-207ENST00000472107 SPP2Q13103 211 aa22.55■■□□□ 1.2
COPS6-207ENST00000472107 USP44Q9H0E7 712 aa22.55■■□□□ 1.2
COPS6-207ENST00000472107 SIL1Q9H173 461 aa22.55■■□□□ 1.2
COPS6-207ENST00000472107 MRS2Q9HD23 443 aa22.55■■□□□ 1.2
COPS6-207ENST00000472107 DDX4Q9NQI0 724 aaKnown RBP22.55■■□□□ 1.2
COPS6-207ENST00000472107 GJD2Q9UKL4 321 aa22.55■■□□□ 1.2
COPS6-207ENST00000472107 GAKO14976 1311 aa22.55■■□□□ 1.2
COPS6-207ENST00000472107 PHKA1P46020 1223 aa22.54■■□□□ 1.2
COPS6-207ENST00000472107 RFX5P48382 616 aaPredicted RBP22.54■■□□□ 1.2
COPS6-207ENST00000472107 ATG9AQ7Z3C6 839 aa22.54■■□□□ 1.2
COPS6-207ENST00000472107 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.54■■□□□ 1.2
COPS6-207ENST00000472107 ZNF280CQ8ND82 737 aa22.54■■□□□ 1.2
COPS6-207ENST00000472107 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.54■■□□□ 1.2
COPS6-207ENST00000472107 ABCF2Q9UG63 623 aa22.54■■□□□ 1.2
COPS6-207ENST00000472107 PTPRFP10586 1907 aa22.54■■□□□ 1.2
COPS6-207ENST00000472107 UNC80Q8N2C7 3258 aa22.54■■□□□ 1.2
COPS6-207ENST00000472107 DOCK1Q14185 1865 aa22.54■■□□□ 1.2
COPS6-207ENST00000472107 RFX7Q2KHR2 1363 aa22.53■■□□□ 1.2
COPS6-207ENST00000472107 CYP2B6P20813 491 aa22.53■■□□□ 1.2
COPS6-207ENST00000472107 BTDP43251 543 aa22.53■■□□□ 1.2
COPS6-207ENST00000472107 HMGCS2P54868 508 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms