RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 TRIM42Q8IWZ5 723 aa6.5□□□□□ -1.37
MDM2-216ENST00000471946 GAL3ST3Q96A11 431 aa6.5□□□□□ -1.37
MDM2-216ENST00000471946 DISC1Q9NRI5 854 aa6.5□□□□□ -1.37
MDM2-216ENST00000471946 CRIM1Q9NZV1 1036 aa6.5□□□□□ -1.37
MDM2-216ENST00000471946 AP4E1Q9UPM8 1137 aa6.5□□□□□ -1.37
MDM2-216ENST00000471946 EIF4A3P38919 411 aaKnown RBP6.49□□□□□ -1.37
MDM2-216ENST00000471946 RACK1P63244 317 aaKnown RBP6.49□□□□□ -1.37
MDM2-216ENST00000471946 SGO2Q562F6 1265 aa6.49□□□□□ -1.37
MDM2-216ENST00000471946 BNC2Q6ZN30 1099 aaPredicted RBP6.49□□□□□ -1.37
MDM2-216ENST00000471946 GOLM1Q8NBJ4 401 aa6.49□□□□□ -1.37
MDM2-216ENST00000471946 FBLIM1Q8WUP2 373 aa6.49□□□□□ -1.37
MDM2-216ENST00000471946 UTP4Q969X6 686 aaKnown RBP6.49□□□□□ -1.37
MDM2-216ENST00000471946 RHOVQ96L33 236 aa6.49□□□□□ -1.37
MDM2-216ENST00000471946 FANCD2OSQ96PS1 177 aa6.49□□□□□ -1.37
MDM2-216ENST00000471946 ACTL7BQ9Y614 415 aa6.49□□□□□ -1.37
MDM2-216ENST00000471946 GAS2O43903 313 aaKnown RBP6.48□□□□□ -1.37
MDM2-216ENST00000471946 F13A1P00488 732 aa6.48□□□□□ -1.37
MDM2-216ENST00000471946 GARTP22102 1010 aa6.48□□□□□ -1.37
MDM2-216ENST00000471946 PPM1JQ5JR12 505 aa6.48□□□□□ -1.37
MDM2-216ENST00000471946 LRFN4Q6PJG9 635 aa6.48□□□□□ -1.37
MDM2-216ENST00000471946 USP48Q86UV5 1035 aa6.48□□□□□ -1.37
MDM2-216ENST00000471946 FAM20CQ8IXL6 584 aa6.48□□□□□ -1.37
MDM2-216ENST00000471946 ZNF296Q8WUU4 475 aaPredicted RBP6.48□□□□□ -1.37
MDM2-216ENST00000471946 MYRFLQ96LU7 910 aa6.48□□□□□ -1.37
MDM2-216ENST00000471946 GSX1Q9H4S2 264 aaPredicted RBP6.48□□□□□ -1.37
MDM2-216ENST00000471946 FAM105AQ9NUU6 356 aa6.48□□□□□ -1.37
MDM2-216ENST00000471946 ADAMTS1Q9UHI8 967 aa6.48□□□□□ -1.37
MDM2-216ENST00000471946 HIF3AQ9Y2N7 669 aa6.48□□□□□ -1.37
MDM2-216ENST00000471946 PCDHGB7Q9Y5F8 929 aa6.48□□□□□ -1.37
MDM2-216ENST00000471946 FAM221AA4D161 298 aa6.47□□□□□ -1.37
MDM2-216ENST00000471946 GFRA2O00451 464 aa6.47□□□□□ -1.37
MDM2-216ENST00000471946 DHX15O43143 795 aaKnown RBP6.47□□□□□ -1.37
MDM2-216ENST00000471946 GREM1O60565 184 aa6.47□□□□□ -1.37
MDM2-216ENST00000471946 RNGTTO60942 597 aaKnown RBP6.47□□□□□ -1.37
MDM2-216ENST00000471946 MAP4P27816 1152 aaKnown RBP6.47□□□□□ -1.37
MDM2-216ENST00000471946 RXRBP28702 533 aa6.47□□□□□ -1.37
MDM2-216ENST00000471946 HNRNPUQ00839 825 aaKnown RBP eCLIP6.47□□□□□ -1.37
MDM2-216ENST00000471946 RING1Q06587 406 aa6.47□□□□□ -1.37
MDM2-216ENST00000471946 TTLL4Q14679 1199 aa6.47□□□□□ -1.37
MDM2-216ENST00000471946 UVSSAQ2YD98 709 aa6.47□□□□□ -1.37
MDM2-216ENST00000471946 NKAPLQ5M9Q1 402 aa6.47□□□□□ -1.37
MDM2-216ENST00000471946 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.47□□□□□ -1.37
MDM2-216ENST00000471946 CCDC84Q86UT8 332 aaPredicted RBP6.47□□□□□ -1.37
MDM2-216ENST00000471946 NT5DC4Q86YG4 428 aa6.47□□□□□ -1.37
MDM2-216ENST00000471946 GATAD2BQ8WXI9 593 aa6.47□□□□□ -1.37
MDM2-216ENST00000471946 ELMO3Q96BJ8 720 aa6.47□□□□□ -1.37
MDM2-216ENST00000471946 PLPPR2Q96GM1 343 aa6.47□□□□□ -1.37
MDM2-216ENST00000471946 KCNF1Q9H3M0 494 aa6.47□□□□□ -1.37
MDM2-216ENST00000471946 LGR6Q9HBX8 967 aa6.47□□□□□ -1.37
MDM2-216ENST00000471946 DDX41Q9UJV9 622 aaKnown RBP6.47□□□□□ -1.37
MDM2-216ENST00000471946 NFICP08651 508 aa6.46□□□□□ -1.38
MDM2-216ENST00000471946 HCLS1P14317 486 aaPredicted RBP6.46□□□□□ -1.38
MDM2-216ENST00000471946 ERVK-24P63145 666 aa6.46□□□□□ -1.38
MDM2-216ENST00000471946 RSPO4Q2I0M5 234 aaPredicted RBP6.46□□□□□ -1.38
MDM2-216ENST00000471946 SNAP47Q5SQN1 464 aa6.46□□□□□ -1.38
MDM2-216ENST00000471946 PRR23CQ6ZRP0 262 aa6.46□□□□□ -1.38
MDM2-216ENST00000471946 BEND4Q6ZU67 534 aa6.46□□□□□ -1.38
MDM2-216ENST00000471946 CYFIP1Q7L576 1253 aa6.46□□□□□ -1.38
MDM2-216ENST00000471946 HDXQ7Z353 690 aa6.46□□□□□ -1.38
MDM2-216ENST00000471946 FBXO27Q8NI29 283 aa6.46□□□□□ -1.38
MDM2-216ENST00000471946 ATXN3LQ9H3M9 355 aa6.46□□□□□ -1.38
MDM2-216ENST00000471946 STOML1Q9UBI4 398 aa6.46□□□□□ -1.38
MDM2-216ENST00000471946 RAXQ9Y2V3 346 aa6.46□□□□□ -1.38
MDM2-216ENST00000471946 SNCAIPQ9Y6H5 919 aa6.46□□□□□ -1.38
MDM2-216ENST00000471946 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.45□□□□□ -1.38
MDM2-216ENST00000471946 HMX2A2RU54 273 aa6.45□□□□□ -1.38
MDM2-216ENST00000471946 TLR3O15455 904 aaKnown RBP6.45□□□□□ -1.38
MDM2-216ENST00000471946 CILPO75339 1184 aa6.45□□□□□ -1.38
MDM2-216ENST00000471946 TCF3P15923 654 aa6.45□□□□□ -1.38
MDM2-216ENST00000471946 RAB6AP20340 208 aa6.45□□□□□ -1.38
MDM2-216ENST00000471946 RPL6Q02878 288 aaKnown RBP6.45□□□□□ -1.38
MDM2-216ENST00000471946 NFKBIBQ15653 356 aa6.45□□□□□ -1.38
MDM2-216ENST00000471946 CLEC10AQ8IUN9 316 aa6.45□□□□□ -1.38
MDM2-216ENST00000471946 RNF214Q8ND24 703 aa6.45□□□□□ -1.38
MDM2-216ENST00000471946 EAF1Q96JC9 268 aaPredicted RBP6.45□□□□□ -1.38
MDM2-216ENST00000471946 FAM83CQ9BQN1 747 aa6.45□□□□□ -1.38
MDM2-216ENST00000471946 ACSS3Q9H6R3 686 aa6.45□□□□□ -1.38
MDM2-216ENST00000471946 KCNQ5Q9NR82 932 aa6.45□□□□□ -1.38
MDM2-216ENST00000471946 IGSF5Q9NSI5 407 aa6.45□□□□□ -1.38
MDM2-216ENST00000471946 FAM95CA0A1B0GW59 222 aa6.44□□□□□ -1.38
MDM2-216ENST00000471946 K7ELQ4 463 aaPredicted RBP6.44□□□□□ -1.38
MDM2-216ENST00000471946 WIPI1Q5MNZ9 446 aaPredicted RBP6.44□□□□□ -1.38
MDM2-216ENST00000471946 FAM196AQ6ZSG2 479 aa6.44□□□□□ -1.38
MDM2-216ENST00000471946 NPM2Q86SE8 214 aaKnown RBP6.44□□□□□ -1.38
MDM2-216ENST00000471946 SMYD4Q8IYR2 804 aaPredicted RBP6.44□□□□□ -1.38
MDM2-216ENST00000471946 ZNF654Q8IZM8 581 aa6.44□□□□□ -1.38
MDM2-216ENST00000471946 EZH1Q92800 747 aaPredicted RBP6.44□□□□□ -1.38
MDM2-216ENST00000471946 SPON2Q9BUD6 331 aa6.44□□□□□ -1.38
MDM2-216ENST00000471946 SEMA6CQ9H3T2 930 aa6.44□□□□□ -1.38
MDM2-216ENST00000471946 PIDD1Q9HB75 910 aa6.44□□□□□ -1.38
MDM2-216ENST00000471946 PICK1Q9NRD5 415 aa6.44□□□□□ -1.38
MDM2-216ENST00000471946 UBP1Q9NZI7 540 aa6.44□□□□□ -1.38
MDM2-216ENST00000471946 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.44□□□□□ -1.38
MDM2-216ENST00000471946 SUPT16HQ9Y5B9 1047 aaKnown RBP6.44□□□□□ -1.38
MDM2-216ENST00000471946 PRAMEF27A3QJZ7 478 aa6.43□□□□□ -1.38
MDM2-216ENST00000471946 FANCGO15287 622 aa6.43□□□□□ -1.38
MDM2-216ENST00000471946 DYNC1LI2O43237 492 aaPredicted RBP6.43□□□□□ -1.38
MDM2-216ENST00000471946 NEFMP07197 916 aa6.43□□□□□ -1.38
MDM2-216ENST00000471946 H2AFB1P0C5Y9 115 aa6.43□□□□□ -1.38
MDM2-216ENST00000471946 H2AFB2P0C5Z0 115 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms