RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
MDM2-216ENST00000471946 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
MDM2-216ENST00000471946 PHF23Q9BUL5 403 aaPredicted RBP17.63■□□□□ 0.41
MDM2-216ENST00000471946 SENP3Q9H4L4 574 aaPredicted RBP17.48■□□□□ 0.39
MDM2-216ENST00000471946 FOXD1Q16676 465 aa16.4■□□□□ 0.22
MDM2-216ENST00000471946 PLPPR3Q6T4P5 718 aa16.25■□□□□ 0.19
MDM2-216ENST00000471946 PPP6R1Q9UPN7 881 aa15.54■□□□□ 0.08
MDM2-216ENST00000471946 ADRA2BP18089 450 aa15.52■□□□□ 0.08
MDM2-216ENST00000471946 PIAS4Q8N2W9 510 aaPredicted RBP15.33■□□□□ 0.04
MDM2-216ENST00000471946 MSH5O43196 834 aa15.16■□□□□ 0.02
MDM2-216ENST00000471946 POTEDQ86YR6 584 aa14.74□□□□□ -0.05
MDM2-216ENST00000471946 PPP4R3CPQ6ZMV5 832 aa14.37□□□□□ -0.11
MDM2-216ENST00000471946 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
MDM2-216ENST00000471946 KCNA4P22459 653 aa14.17□□□□□ -0.14
MDM2-216ENST00000471946 SCAF1Q9H7N4 1312 aaKnown RBP14.13□□□□□ -0.15
MDM2-216ENST00000471946 NCBP3Q53F19 620 aaKnown RBP13.98□□□□□ -0.17
MDM2-216ENST00000471946 CNKSR2Q8WXI2 1034 aa13.91□□□□□ -0.18
MDM2-216ENST00000471946 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
MDM2-216ENST00000471946 NPM3O75607 178 aaKnown RBP13.82□□□□□ -0.2
MDM2-216ENST00000471946 RNF216Q9NWF9 866 aaPredicted RBP13.6□□□□□ -0.23
MDM2-216ENST00000471946 HOXD11P31277 338 aaPredicted RBP13.52□□□□□ -0.25
MDM2-216ENST00000471946 SLC4A1APQ9BWU0 796 aaKnown RBP13.49□□□□□ -0.25
MDM2-216ENST00000471946 DCAF8L1A6NGE4 600 aa13.45□□□□□ -0.26
MDM2-216ENST00000471946 DNAJC5BQ9UF47 199 aa13.32□□□□□ -0.28
MDM2-216ENST00000471946 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
MDM2-216ENST00000471946 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
MDM2-216ENST00000471946 CACNB1Q02641 598 aaPredicted RBP13.05□□□□□ -0.32
MDM2-216ENST00000471946 ZBTB22O15209 634 aa13.04□□□□□ -0.32
MDM2-216ENST00000471946 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
MDM2-216ENST00000471946 RNF39Q9H2S5 420 aa13.01□□□□□ -0.33
MDM2-216ENST00000471946 FOXD4L1Q9NU39 408 aa12.96□□□□□ -0.33
MDM2-216ENST00000471946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.91□□□□□ -0.34
MDM2-216ENST00000471946 C1QBPQ07021 282 aaKnown RBP12.77□□□□□ -0.37
MDM2-216ENST00000471946 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
MDM2-216ENST00000471946 U3KPZ7 1027 aaPredicted RBP12.7□□□□□ -0.38
MDM2-216ENST00000471946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.53□□□□□ -0.4
MDM2-216ENST00000471946 HNRNPUL2Q1KMD3 747 aaKnown RBP12.53□□□□□ -0.4
MDM2-216ENST00000471946 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
MDM2-216ENST00000471946 ATXN8OSP0DMR3 200 aa12.49□□□□□ -0.41
MDM2-216ENST00000471946 ATF5Q9Y2D1 282 aaPredicted RBP12.46□□□□□ -0.41
MDM2-216ENST00000471946 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
MDM2-216ENST00000471946 CAPN15O75808 1086 aa12.38□□□□□ -0.43
MDM2-216ENST00000471946 APLP2Q06481 763 aa12.35□□□□□ -0.43
MDM2-216ENST00000471946 TRHP20396 242 aaPredicted RBP12.26□□□□□ -0.45
MDM2-216ENST00000471946 DSG3P32926 999 aa12.25□□□□□ -0.45
MDM2-216ENST00000471946 ZNF219Q9P2Y4 722 aaPredicted RBP12.22□□□□□ -0.45
MDM2-216ENST00000471946 ABCB7O75027 752 aa12.17□□□□□ -0.46
MDM2-216ENST00000471946 POLA2Q14181 598 aa12.1□□□□□ -0.47
MDM2-216ENST00000471946 MKRN4PQ13434 485 aaPredicted RBP11.89□□□□□ -0.51
MDM2-216ENST00000471946 FBLN2P98095 1184 aa11.84□□□□□ -0.51
MDM2-216ENST00000471946 FKBP8Q14318 412 aa11.8□□□□□ -0.52
MDM2-216ENST00000471946 ZBTB12Q9Y330 459 aaPredicted RBP11.8□□□□□ -0.52
MDM2-216ENST00000471946 SPDYE4A6NLX3 237 aa11.66□□□□□ -0.54
MDM2-216ENST00000471946 OSCARQ8IYS5 282 aa11.63□□□□□ -0.55
MDM2-216ENST00000471946 RBM42Q9BTD8 480 aaKnown RBP11.56□□□□□ -0.56
MDM2-216ENST00000471946 ZNF692Q9BU19 519 aaPredicted RBP11.56□□□□□ -0.56
MDM2-216ENST00000471946 POTEHQ6S545 545 aa11.55□□□□□ -0.56
MDM2-216ENST00000471946 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
MDM2-216ENST00000471946 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
MDM2-216ENST00000471946 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.57
MDM2-216ENST00000471946 PROM2Q8N271 834 aa11.45□□□□□ -0.58
MDM2-216ENST00000471946 SSUH2Q9Y2M2 353 aa11.45□□□□□ -0.58
MDM2-216ENST00000471946 PABPN1Q86U42 306 aaKnown RBP eCLIP11.4□□□□□ -0.58
MDM2-216ENST00000471946 CHRDL2Q6WN34 429 aa11.37□□□□□ -0.59
MDM2-216ENST00000471946 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
MDM2-216ENST00000471946 REM2Q8IYK8 340 aaPredicted RBP11.34□□□□□ -0.59
MDM2-216ENST00000471946 FBXO3Q9UK99 471 aa11.3□□□□□ -0.6
MDM2-216ENST00000471946 PITPNM1O00562 1244 aa11.23□□□□□ -0.61
MDM2-216ENST00000471946 STAG3Q9UJ98 1225 aa11.2□□□□□ -0.62
MDM2-216ENST00000471946 CLEC11AQ9Y240 323 aa11.17□□□□□ -0.62
MDM2-216ENST00000471946 PIP4P2Q8N4L2 257 aa11.16□□□□□ -0.62
MDM2-216ENST00000471946 SPDYE1Q8NFV5 336 aaPredicted RBP11.16□□□□□ -0.62
MDM2-216ENST00000471946 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
MDM2-216ENST00000471946 MIER1Q8N108 512 aa11.09□□□□□ -0.63
MDM2-216ENST00000471946 PRR29P0C7W0 189 aa11.07□□□□□ -0.64
MDM2-216ENST00000471946 IFNLR1Q8IU57 520 aaPredicted RBP11.07□□□□□ -0.64
MDM2-216ENST00000471946 FXR2P51116 673 aaKnown RBP eCLIP11.06□□□□□ -0.64
MDM2-216ENST00000471946 PLCD3Q8N3E9 789 aa11.04□□□□□ -0.64
MDM2-216ENST00000471946 KLHL34Q8N239 644 aa10.99□□□□□ -0.65
MDM2-216ENST00000471946 CREBZFQ9NS37 354 aa10.95□□□□□ -0.66
MDM2-216ENST00000471946 PLEKHG5O94827 1062 aa10.94□□□□□ -0.66
MDM2-216ENST00000471946 PRKAR2AP13861 404 aaKnown RBP10.94□□□□□ -0.66
MDM2-216ENST00000471946 HAX1O00165 279 aa10.93□□□□□ -0.66
MDM2-216ENST00000471946 RTN4Q9NQC3 1192 aaKnown RBP10.93□□□□□ -0.66
MDM2-216ENST00000471946 CHADLQ6NUI6 762 aa10.92□□□□□ -0.66
MDM2-216ENST00000471946 EVX2Q03828 476 aa10.9□□□□□ -0.66
MDM2-216ENST00000471946 AMER1Q5JTC6 1135 aaPredicted RBP10.9□□□□□ -0.66
MDM2-216ENST00000471946 SPOCK2Q92563 424 aa10.88□□□□□ -0.67
MDM2-216ENST00000471946 MNX1P50219 401 aaPredicted RBP10.86□□□□□ -0.67
MDM2-216ENST00000471946 SP7Q8TDD2 431 aaPredicted RBP10.86□□□□□ -0.67
MDM2-216ENST00000471946 ZBTB47Q9UFB7 747 aaPredicted RBP10.86□□□□□ -0.67
MDM2-216ENST00000471946 NUBP1P53384 320 aa10.77□□□□□ -0.69
MDM2-216ENST00000471946 FARP1Q9Y4F1 1045 aaPredicted RBP10.77□□□□□ -0.69
MDM2-216ENST00000471946 NPM1P06748 294 aaKnown RBP eCLIP10.74□□□□□ -0.69
MDM2-216ENST00000471946 PKD2Q13563 968 aa10.73□□□□□ -0.69
MDM2-216ENST00000471946 CIZ1Q9ULV3 898 aaPredicted RBP10.72□□□□□ -0.69
MDM2-216ENST00000471946 C19orf67A6NJJ6 358 aa10.71□□□□□ -0.69
MDM2-216ENST00000471946 DCAF8Q5TAQ9 597 aa10.7□□□□□ -0.7
MDM2-216ENST00000471946 RASEFQ8IZ41 740 aa10.69□□□□□ -0.7
MDM2-216ENST00000471946 GSE1Q14687 1217 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms