RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 POP1Q99575 1024 aaKnown RBP4.43□□□□□ -1.7
SCN3A-207ENST00000471697 YIPF2Q9BWQ6 316 aa4.43□□□□□ -1.7
SCN3A-207ENST00000471697 ZSWIM4Q9H7M6 989 aa4.43□□□□□ -1.7
SCN3A-207ENST00000471697 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.43□□□□□ -1.7
SCN3A-207ENST00000471697 LRRC10BA6NIK2 292 aa4.42□□□□□ -1.7
SCN3A-207ENST00000471697 U2SURPO15042 1029 aaKnown RBP4.42□□□□□ -1.7
SCN3A-207ENST00000471697 FOXO3O43524 673 aa4.42□□□□□ -1.7
SCN3A-207ENST00000471697 CREB3O43889 395 aa4.42□□□□□ -1.7
SCN3A-207ENST00000471697 PRMT3O60678 531 aa4.42□□□□□ -1.7
SCN3A-207ENST00000471697 PPFIA4O75335 1185 aa4.42□□□□□ -1.7
SCN3A-207ENST00000471697 USP11P51784 963 aa4.42□□□□□ -1.7
SCN3A-207ENST00000471697 FAM50AQ14320 339 aaKnown RBP4.42□□□□□ -1.7
SCN3A-207ENST00000471697 ECM1Q16610 540 aa4.42□□□□□ -1.7
SCN3A-207ENST00000471697 CAPN12Q6ZSI9 719 aa4.42□□□□□ -1.7
SCN3A-207ENST00000471697 TMTC2Q8N394 836 aa4.42□□□□□ -1.7
SCN3A-207ENST00000471697 C2CD4AQ8NCU7 369 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-207ENST00000471697 MAF1Q9H063 256 aa4.42□□□□□ -1.7
SCN3A-207ENST00000471697 IRF2BPLQ9H1B7 796 aa4.42□□□□□ -1.7
SCN3A-207ENST00000471697 CAPN10Q9HC96 672 aa4.42□□□□□ -1.7
SCN3A-207ENST00000471697 PRDM10Q9NQV6 1147 aa4.42□□□□□ -1.7
SCN3A-207ENST00000471697 METTL5Q9NRN9 209 aaKnown RBP4.42□□□□□ -1.7
SCN3A-207ENST00000471697 DCTN4Q9UJW0 460 aa4.42□□□□□ -1.7
SCN3A-207ENST00000471697 LRFN2Q9ULH4 789 aa4.42□□□□□ -1.7
SCN3A-207ENST00000471697 ICMTO60725 284 aa4.41□□□□□ -1.7
SCN3A-207ENST00000471697 MAPK1P28482 360 aa4.41□□□□□ -1.7
SCN3A-207ENST00000471697 FKBP5Q13451 457 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-207ENST00000471697 PLEKHG6Q3KR16 790 aa4.41□□□□□ -1.7
SCN3A-207ENST00000471697 ZNF765Q7L2R6 523 aa4.41□□□□□ -1.7
SCN3A-207ENST00000471697 JAZF1Q86VZ6 243 aa4.41□□□□□ -1.7
SCN3A-207ENST00000471697 CCAR1Q8IX12 1150 aaKnown RBP4.41□□□□□ -1.7
SCN3A-207ENST00000471697 GPATCH11Q8N954 259 aa4.41□□□□□ -1.7
SCN3A-207ENST00000471697 PMFBP1Q8TBY8 1022 aa4.41□□□□□ -1.7
SCN3A-207ENST00000471697 CSRNP1Q96S65 589 aa4.41□□□□□ -1.7
SCN3A-207ENST00000471697 LRRC4CQ9HCJ2 640 aa4.41□□□□□ -1.7
SCN3A-207ENST00000471697 PCDH12Q9NPG4 1184 aa4.41□□□□□ -1.7
SCN3A-207ENST00000471697 ADAMTS6Q9UKP5 1117 aa4.41□□□□□ -1.7
SCN3A-207ENST00000471697 COL4A3BPQ9Y5P4 624 aa4.41□□□□□ -1.7
SCN3A-207ENST00000471697 SCNN1AP37088 669 aa4.4□□□□□ -1.71
SCN3A-207ENST00000471697 C19orf57Q0VDD7 668 aa4.4□□□□□ -1.71
SCN3A-207ENST00000471697 OCLNQ16625 522 aa4.4□□□□□ -1.71
SCN3A-207ENST00000471697 ANKLE2Q86XL3 938 aa4.4□□□□□ -1.71
SCN3A-207ENST00000471697 RPUSD2Q8IZ73 545 aaKnown RBP4.4□□□□□ -1.71
SCN3A-207ENST00000471697 TMEM87AQ8NBN3 555 aa4.4□□□□□ -1.71
SCN3A-207ENST00000471697 LRRN4CLQ8ND94 238 aa4.4□□□□□ -1.71
SCN3A-207ENST00000471697 FLAD1Q8NFF5 587 aa4.4□□□□□ -1.71
SCN3A-207ENST00000471697 RNF34Q969K3 372 aa4.4□□□□□ -1.71
SCN3A-207ENST00000471697 OSBPL2Q9H1P3 480 aa4.4□□□□□ -1.71
SCN3A-207ENST00000471697 IFT57Q9NWB7 429 aa4.4□□□□□ -1.71
SCN3A-207ENST00000471697 LOC100289279A0A1B0GTE1 492 aa4.39□□□□□ -1.71
SCN3A-207ENST00000471697 ZNF503-AS2A6NEH8 195 aa4.39□□□□□ -1.71
SCN3A-207ENST00000471697 PTMSP20962 102 aa4.39□□□□□ -1.71
SCN3A-207ENST00000471697 ARL4DP49703 201 aa4.39□□□□□ -1.71
SCN3A-207ENST00000471697 CTSWP56202 376 aa4.39□□□□□ -1.71
SCN3A-207ENST00000471697 FANCCQ00597 558 aa4.39□□□□□ -1.71
SCN3A-207ENST00000471697 GNL2Q13823 731 aaKnown RBP4.39□□□□□ -1.71
SCN3A-207ENST00000471697 BMS1Q14692 1282 aaKnown RBP4.39□□□□□ -1.71
SCN3A-207ENST00000471697 SWI5Q1ZZU3 235 aa4.39□□□□□ -1.71
SCN3A-207ENST00000471697 LONRF3Q496Y0 759 aa4.39□□□□□ -1.71
SCN3A-207ENST00000471697 FAM26DQ5JW98 314 aa4.39□□□□□ -1.71
SCN3A-207ENST00000471697 PKNOX2Q96KN3 472 aa4.39□□□□□ -1.71
SCN3A-207ENST00000471697 SAP130Q9H0E3 1048 aa4.39□□□□□ -1.71
SCN3A-207ENST00000471697 ACBD3Q9H3P7 528 aa4.39□□□□□ -1.71
SCN3A-207ENST00000471697 CCSER2Q9H7U1 834 aa4.39□□□□□ -1.71
SCN3A-207ENST00000471697 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.39□□□□□ -1.71
SCN3A-207ENST00000471697 GEMIN8Q9NWZ8 242 aaKnown RBP4.39□□□□□ -1.71
SCN3A-207ENST00000471697 UBAP1LF5GYI3 381 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 DLGAP3O95886 979 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 CD8BP10966 210 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 DRD2P14416 443 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 SOX4Q06945 474 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-207ENST00000471697 BNIP3Q12983 259 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 MAP7Q14244 749 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 C4orf46Q504U0 113 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 COX20Q5RI15 118 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 EXOSC6Q5RKV6 272 aaKnown RBP4.38□□□□□ -1.71
SCN3A-207ENST00000471697 ZFYVE27Q5T4F4 411 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 CLEC4GQ6UXB4 293 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 DBX2Q6ZNG2 339 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 TSHZ1Q6ZSZ6 1077 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 FILIP1Q7Z7B0 1213 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 ZSWIM9Q86XI8 627 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 STAG1Q8WVM7 1258 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 NAP1L5Q96NT1 182 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-207ENST00000471697 DDX56Q9NY93 547 aaKnown RBP4.38□□□□□ -1.71
SCN3A-207ENST00000471697 GABBR1Q9UBS5 961 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 SOX13Q9UN79 622 aa4.38□□□□□ -1.71
SCN3A-207ENST00000471697 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-207ENST00000471697 H3BRB1 525 aa4.37□□□□□ -1.71
SCN3A-207ENST00000471697 NFKBIEO00221 500 aa4.37□□□□□ -1.71
SCN3A-207ENST00000471697 ENPP3O14638 875 aa4.37□□□□□ -1.71
SCN3A-207ENST00000471697 KRT1P04264 644 aa4.37□□□□□ -1.71
SCN3A-207ENST00000471697 INHBBP09529 407 aa4.37□□□□□ -1.71
SCN3A-207ENST00000471697 XRCC5P13010 732 aaKnown RBP4.37□□□□□ -1.71
SCN3A-207ENST00000471697 DNAJA1P31689 397 aaKnown RBP4.37□□□□□ -1.71
SCN3A-207ENST00000471697 RHBDL3P58872 404 aa4.37□□□□□ -1.71
SCN3A-207ENST00000471697 ARID5AQ03989 594 aa4.37□□□□□ -1.71
SCN3A-207ENST00000471697 NAA30Q147X3 362 aaPredicted RBP4.37□□□□□ -1.71
SCN3A-207ENST00000471697 MLANAQ16655 118 aa4.37□□□□□ -1.71
SCN3A-207ENST00000471697 TTC39BQ5VTQ0 682 aaPredicted RBP4.37□□□□□ -1.71
SCN3A-207ENST00000471697 SEZ6L2Q6UXD5 910 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms