RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 ALYREFQ86V81 257 aaKnown RBP9.66□□□□□ -0.86
PTP4A1-202ENST00000470661 IL22RA1Q8N6P7 574 aa9.66□□□□□ -0.86
PTP4A1-202ENST00000470661 PMEPA1Q969W9 287 aa9.66□□□□□ -0.86
PTP4A1-202ENST00000470661 HHIPQ96QV1 700 aa9.66□□□□□ -0.86
PTP4A1-202ENST00000470661 PBX4Q9BYU1 374 aa9.66□□□□□ -0.86
PTP4A1-202ENST00000470661 ZFYVE28Q9HCC9 887 aa9.66□□□□□ -0.86
PTP4A1-202ENST00000470661 LATS2Q9NRM7 1088 aa9.66□□□□□ -0.86
PTP4A1-202ENST00000470661 IFT172Q9UG01 1749 aa9.65□□□□□ -0.86
PTP4A1-202ENST00000470661 JCADQ9P266 1359 aa9.65□□□□□ -0.86
PTP4A1-202ENST00000470661 LRP6O75581 1613 aa9.65□□□□□ -0.86
PTP4A1-202ENST00000470661 COL16A1Q07092 1604 aaPredicted RBP9.65□□□□□ -0.86
PTP4A1-202ENST00000470661 SMNDC1O75940 238 aaKnown RBP eCLIP9.65□□□□□ -0.865e-7■□□□□ 10
PTP4A1-202ENST00000470661 ITGB2P05107 769 aa9.65□□□□□ -0.86
PTP4A1-202ENST00000470661 SPATA31C1P0DKV0 1188 aa9.65□□□□□ -0.86
PTP4A1-202ENST00000470661 MAPK1P28482 360 aa9.65□□□□□ -0.86
PTP4A1-202ENST00000470661 PLA2G4EQ3MJ16 856 aa9.65□□□□□ -0.86
PTP4A1-202ENST00000470661 USPL1Q5W0Q7 1092 aa9.65□□□□□ -0.86
PTP4A1-202ENST00000470661 RBCK1Q9BYM8 510 aa9.65□□□□□ -0.86
PTP4A1-202ENST00000470661 POGKQ9P215 609 aa9.65□□□□□ -0.86
PTP4A1-202ENST00000470661 DCTN4Q9UJW0 460 aa9.65□□□□□ -0.86
PTP4A1-202ENST00000470661 ABCC11Q96J66 1382 aa9.64□□□□□ -0.87
PTP4A1-202ENST00000470661 IGHA2P01877 340 aa9.64□□□□□ -0.87
PTP4A1-202ENST00000470661 RAC1P63000 192 aa9.64□□□□□ -0.87
PTP4A1-202ENST00000470661 GRIK4Q16099 956 aa9.64□□□□□ -0.87
PTP4A1-202ENST00000470661 GPAT2Q6NUI2 795 aa9.64□□□□□ -0.87
PTP4A1-202ENST00000470661 TMC7Q7Z402 723 aa9.64□□□□□ -0.87
PTP4A1-202ENST00000470661 PMFBP1Q8TBY8 1022 aa9.64□□□□□ -0.87
PTP4A1-202ENST00000470661 CITED4Q96RK1 184 aa9.64□□□□□ -0.87
PTP4A1-202ENST00000470661 NIF3L1Q9GZT8 377 aa9.64□□□□□ -0.87
PTP4A1-202ENST00000470661 PTCH1Q13635 1447 aa9.64□□□□□ -0.87
PTP4A1-202ENST00000470661 PATL2C9JE40 543 aaKnown RBP9.63□□□□□ -0.87
PTP4A1-202ENST00000470661 POP1Q99575 1024 aaKnown RBP9.63□□□□□ -0.87
PTP4A1-202ENST00000470661 OSMRQ99650 979 aa9.63□□□□□ -0.87
PTP4A1-202ENST00000470661 ZKSCAN3Q9BRR0 538 aa9.63□□□□□ -0.87
PTP4A1-202ENST00000470661 DZANK1Q9NVP4 752 aa9.63□□□□□ -0.87
PTP4A1-202ENST00000470661 NRXN1Q9ULB1 1477 aa9.62□□□□□ -0.87
PTP4A1-202ENST00000470661 NFKBIEO00221 500 aa9.62□□□□□ -0.87
PTP4A1-202ENST00000470661 EDN3P14138 238 aa9.62□□□□□ -0.87
PTP4A1-202ENST00000470661 CDC25BP30305 580 aa9.62□□□□□ -0.87
PTP4A1-202ENST00000470661 CHRNA4P43681 627 aa9.62□□□□□ -0.87
PTP4A1-202ENST00000470661 FMR1NBQ8N0W7 255 aaPredicted RBP9.62□□□□□ -0.87
PTP4A1-202ENST00000470661 LRRC59Q96AG4 307 aaKnown RBP9.62□□□□□ -0.87
PTP4A1-202ENST00000470661 C8orf37Q96NL8 207 aa9.62□□□□□ -0.87
PTP4A1-202ENST00000470661 SH2B1Q9NRF2 756 aaPredicted RBP9.62□□□□□ -0.87
PTP4A1-202ENST00000470661 C1QTNF9BB2RNN3 333 aa9.61□□□□□ -0.87
PTP4A1-202ENST00000470661 DEAF1O75398 565 aaPredicted RBP9.61□□□□□ -0.87
PTP4A1-202ENST00000470661 PEAR1Q5VY43 1037 aaPredicted RBP9.61□□□□□ -0.87
PTP4A1-202ENST00000470661 TXNDC11Q6PKC3 985 aa9.61□□□□□ -0.87
PTP4A1-202ENST00000470661 CD163Q86VB7 1156 aa9.61□□□□□ -0.87
PTP4A1-202ENST00000470661 DCCP43146 1447 aa9.61□□□□□ -0.87
PTP4A1-202ENST00000470661 AHDC1Q5TGY3 1603 aaPredicted RBP9.6□□□□□ -0.87
PTP4A1-202ENST00000470661 TECPR2O15040 1411 aa9.6□□□□□ -0.87
PTP4A1-202ENST00000470661 PDE2AO00408 941 aaPredicted RBP9.6□□□□□ -0.87
PTP4A1-202ENST00000470661 ELNP15502 786 aa9.6□□□□□ -0.87
PTP4A1-202ENST00000470661 CDC27P30260 824 aa9.6□□□□□ -0.87
PTP4A1-202ENST00000470661 SHISA2Q6UWI4 295 aa9.6□□□□□ -0.87
PTP4A1-202ENST00000470661 KRT28Q7Z3Y7 464 aa9.6□□□□□ -0.87
PTP4A1-202ENST00000470661 DMRTB1Q96MA1 342 aa9.6□□□□□ -0.87
PTP4A1-202ENST00000470661 PNPLA6Q8IY17 1366 aa9.6□□□□□ -0.87
PTP4A1-202ENST00000470661 MYOM2P54296 1465 aa9.59□□□□□ -0.87
PTP4A1-202ENST00000470661 AFF2P51816 1311 aa9.59□□□□□ -0.87
PTP4A1-202ENST00000470661 PRR36Q9H6K5 1346 aa9.59□□□□□ -0.87
PTP4A1-202ENST00000470661 APBA3O96018 575 aa9.59□□□□□ -0.87
PTP4A1-202ENST00000470661 PTPRAP18433 802 aa9.59□□□□□ -0.87
PTP4A1-202ENST00000470661 EPHA1P21709 976 aa9.59□□□□□ -0.87
PTP4A1-202ENST00000470661 TRIM26Q12899 539 aaPredicted RBP9.59□□□□□ -0.87
PTP4A1-202ENST00000470661 FBXO11Q86XK2 927 aa9.59□□□□□ -0.87
PTP4A1-202ENST00000470661 PPME1Q9Y570 386 aa9.59□□□□□ -0.87
PTP4A1-202ENST00000470661 RGPD8O14715 1765 aaPredicted RBP9.59□□□□□ -0.87
PTP4A1-202ENST00000470661 ADGRB1O14514 1584 aa9.58□□□□□ -0.88
PTP4A1-202ENST00000470661 LINC01387J3KSC0 135 aa9.58□□□□□ -0.88
PTP4A1-202ENST00000470661 EIF1AYO14602 144 aaKnown RBP9.58□□□□□ -0.88
PTP4A1-202ENST00000470661 CPNE3O75131 537 aaKnown RBP9.58□□□□□ -0.88
PTP4A1-202ENST00000470661 NEFLP07196 543 aa9.58□□□□□ -0.88
PTP4A1-202ENST00000470661 NBPF8Q3BBV2 869 aa9.58□□□□□ -0.88
PTP4A1-202ENST00000470661 GALNT12Q8IXK2 581 aa9.58□□□□□ -0.88
PTP4A1-202ENST00000470661 DTWD1Q8N5C7 304 aa9.58□□□□□ -0.88
PTP4A1-202ENST00000470661 SPATA31A6Q5VVP1 1343 aa9.57□□□□□ -0.88
PTP4A1-202ENST00000470661 SELPP16109 830 aa9.57□□□□□ -0.88
PTP4A1-202ENST00000470661 TMEM102Q8N9M5 508 aaPredicted RBP9.57□□□□□ -0.88
PTP4A1-202ENST00000470661 NXPE3Q969Y0 559 aa9.57□□□□□ -0.88
PTP4A1-202ENST00000470661 ALKBH8Q96BT7 664 aaKnown RBP9.57□□□□□ -0.88
PTP4A1-202ENST00000470661 CDK19Q9BWU1 502 aa9.57□□□□□ -0.88
PTP4A1-202ENST00000470661 NPHS2Q9NP85 383 aa9.57□□□□□ -0.88
PTP4A1-202ENST00000470661 PRAG1Q86YV5 1406 aa9.56□□□□□ -0.88
PTP4A1-202ENST00000470661 NHSL1Q5SYE7 1610 aa9.56□□□□□ -0.88
PTP4A1-202ENST00000470661 A0A1W2PP55 124 aa9.56□□□□□ -0.88
PTP4A1-202ENST00000470661 METTL12A8MUP2 240 aa9.56□□□□□ -0.88
PTP4A1-202ENST00000470661 SETDB1Q15047 1291 aa9.56□□□□□ -0.88
PTP4A1-202ENST00000470661 NUTM2GQ5VZR2 741 aa9.56□□□□□ -0.88
PTP4A1-202ENST00000470661 CACTIN-AS1Q8N1I8 211 aa9.56□□□□□ -0.88
PTP4A1-202ENST00000470661 ASAP3Q8TDY4 903 aa9.56□□□□□ -0.88
PTP4A1-202ENST00000470661 CSRNP1Q96S65 589 aa9.56□□□□□ -0.88
PTP4A1-202ENST00000470661 SPOCK3Q9BQ16 436 aa9.56□□□□□ -0.88
PTP4A1-202ENST00000470661 CARD10Q9BWT7 1032 aa9.56□□□□□ -0.88
PTP4A1-202ENST00000470661 ADAM19Q9H013 955 aa9.56□□□□□ -0.88
PTP4A1-202ENST00000470661 NPHP3Q7Z494 1330 aa9.56□□□□□ -0.88
PTP4A1-202ENST00000470661 FAM177BA6PVY3 158 aa9.55□□□□□ -0.88
PTP4A1-202ENST00000470661 MSTNO14793 375 aa9.55□□□□□ -0.88
PTP4A1-202ENST00000470661 TREHO43280 583 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms