RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 BRPF3Q9ULD4 1205 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 USP17L3A6NCW0 530 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 USP17L4A6NCW7 530 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 G3V3G9 751 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 KDM4AO75164 1064 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 FGRP09769 529 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 EVCP57679 992 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 GSTO1P78417 241 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 STK3Q13188 491 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 DCAF8Q5TAQ9 597 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 USP17L1Q7RTZ2 530 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 MAPKAPK5Q8IW41 473 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 IL27Q8NEV9 243 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 IGDCC4Q8TDY8 1250 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 INTS4Q96HW7 963 aaKnown RBP9.86□□□□□ -0.83
GTF3A-206ENST00000470606 DDX4Q9NQI0 724 aaKnown RBP9.86□□□□□ -0.83
GTF3A-206ENST00000470606 ATP8A2Q9NTI2 1148 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 CHMP5Q9NZZ3 219 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 BCS1LQ9Y276 419 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 SUGT1Q9Y2Z0 365 aa9.86□□□□□ -0.83
GTF3A-206ENST00000470606 PRDM1O75626 825 aa9.85□□□□□ -0.83
GTF3A-206ENST00000470606 WDHD1O75717 1129 aaPredicted RBP9.85□□□□□ -0.83
GTF3A-206ENST00000470606 RAD17O75943 681 aa9.85□□□□□ -0.83
GTF3A-206ENST00000470606 LDHCP07864 332 aa9.85□□□□□ -0.83
GTF3A-206ENST00000470606 MCM5P33992 734 aa9.85□□□□□ -0.83
GTF3A-206ENST00000470606 PLCD1P51178 756 aa9.85□□□□□ -0.83
GTF3A-206ENST00000470606 LARGE2Q8N3Y3 721 aa9.85□□□□□ -0.83
GTF3A-206ENST00000470606 SUPT20HQ8NEM7 779 aa9.85□□□□□ -0.83
GTF3A-206ENST00000470606 MCM9Q9NXL9 1143 aa9.85□□□□□ -0.83
GTF3A-206ENST00000470606 HPS5Q9UPZ3 1129 aa9.85□□□□□ -0.83
GTF3A-206ENST00000470606 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.85□□□□□ -0.83
GTF3A-206ENST00000470606 CTDNEP1O95476 244 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 PDIA3P30101 505 aaKnown RBP9.84□□□□□ -0.83
GTF3A-206ENST00000470606 FKBP1AP62942 108 aaKnown RBP9.84□□□□□ -0.83
GTF3A-206ENST00000470606 SCRN1Q12765 414 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 RAB3GAP1Q15042 981 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 GRIPAP1Q4V328 841 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 SBK1Q52WX2 424 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 C12orf60Q5U649 245 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 MFSD6Q6ZSS7 791 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 RAB11FIP4Q86YS3 637 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 DYNLL2Q96FJ2 89 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 CHAMP1Q96JM3 812 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 GMLQ99445 158 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 ZKSCAN3Q9BRR0 538 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 NCOA5Q9HCD5 579 aaKnown RBP9.84□□□□□ -0.83
GTF3A-206ENST00000470606 SH2B1Q9NRF2 756 aaPredicted RBP9.84□□□□□ -0.83
GTF3A-206ENST00000470606 FLT1P17948 1338 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 TCHHQ07283 1943 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 PSMD14O00487 310 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 SH2B2O14492 632 aaPredicted RBP9.84□□□□□ -0.83
GTF3A-206ENST00000470606 BAG3O95817 575 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 SLURP2P0DP57 97 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 IARSP41252 1262 aaKnown RBP9.84□□□□□ -0.83
GTF3A-206ENST00000470606 CRKP46108 304 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 RASSF7Q02833 373 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 NFIAQ12857 509 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 ANKRD1Q15327 319 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 RRP12Q5JTH9 1297 aaKnown RBP9.84□□□□□ -0.83
GTF3A-206ENST00000470606 CDC42EP5Q6NZY7 148 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 HHIPL2Q6UWX4 724 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 RALYLQ86SE5 291 aaKnown RBP9.84□□□□□ -0.83
GTF3A-206ENST00000470606 SLC44A5Q8NCS7 719 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 GTF3C6Q969F1 213 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 ZSCAN31Q96LW9 406 aaPredicted RBP9.84□□□□□ -0.83
GTF3A-206ENST00000470606 LY9Q9HBG7 655 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 SPON1Q9HCB6 807 aa9.84□□□□□ -0.83
GTF3A-206ENST00000470606 SAP30BPQ9UHR5 308 aaKnown RBP9.84□□□□□ -0.83
GTF3A-206ENST00000470606 CIZ1Q9ULV3 898 aaPredicted RBP9.84□□□□□ -0.83
GTF3A-206ENST00000470606 ZBTB12Q9Y330 459 aaPredicted RBP9.84□□□□□ -0.83
GTF3A-206ENST00000470606 WDR19Q8NEZ3 1342 aa9.83□□□□□ -0.84
GTF3A-206ENST00000470606 SIPA1L1O43166 1804 aa9.83□□□□□ -0.84
GTF3A-206ENST00000470606 JAK2O60674 1132 aa9.83□□□□□ -0.84
GTF3A-206ENST00000470606 PPFIA3O75145 1194 aa9.83□□□□□ -0.84
GTF3A-206ENST00000470606 VIL1P09327 827 aaKnown RBP9.83□□□□□ -0.84
GTF3A-206ENST00000470606 USP5P45974 858 aa9.83□□□□□ -0.84
GTF3A-206ENST00000470606 CACNB3P54284 484 aa9.83□□□□□ -0.84
GTF3A-206ENST00000470606 CXCL9Q07325 125 aa9.83□□□□□ -0.84
GTF3A-206ENST00000470606 ZFPM1Q8IX07 1006 aa9.83□□□□□ -0.84
GTF3A-206ENST00000470606 TEX11Q8IYF3 940 aa9.83□□□□□ -0.84
GTF3A-206ENST00000470606 TNPO1Q92973 898 aaKnown RBP9.83□□□□□ -0.84
GTF3A-206ENST00000470606 ZDHHC15Q96MV8 337 aa9.83□□□□□ -0.84
GTF3A-206ENST00000470606 FHDC1Q9C0D6 1143 aaPredicted RBP9.83□□□□□ -0.84
GTF3A-206ENST00000470606 TAOK3Q9H2K8 898 aa9.83□□□□□ -0.84
GTF3A-206ENST00000470606 BAZ2BQ9UIF8 2168 aaKnown RBP9.82□□□□□ -0.84
GTF3A-206ENST00000470606 SBF1O95248 1867 aa9.82□□□□□ -0.84
GTF3A-206ENST00000470606 SHTN1A0MZ66 631 aa9.82□□□□□ -0.84
GTF3A-206ENST00000470606 NMT2O60551 498 aa9.82□□□□□ -0.84
GTF3A-206ENST00000470606 PFKFB2O60825 505 aa9.82□□□□□ -0.84
GTF3A-206ENST00000470606 CCT2P78371 535 aaKnown RBP9.82□□□□□ -0.84
GTF3A-206ENST00000470606 TRDNQ13061 729 aa9.82□□□□□ -0.84
GTF3A-206ENST00000470606 NFKBIBQ15653 356 aa9.82□□□□□ -0.84
GTF3A-206ENST00000470606 TEKT1Q969V4 418 aa9.82□□□□□ -0.84
GTF3A-206ENST00000470606 MRIQ9BWK5 157 aa9.82□□□□□ -0.84
GTF3A-206ENST00000470606 CWC22Q9HCG8 908 aaKnown RBP9.82□□□□□ -0.84
GTF3A-206ENST00000470606 ARPP21Q9UBL0 812 aaPredicted RBP9.82□□□□□ -0.84
GTF3A-206ENST00000470606 ZNRF3Q9ULT6 936 aa9.82□□□□□ -0.84
GTF3A-206ENST00000470606 ANGEL1Q9UNK9 670 aaKnown RBP9.82□□□□□ -0.84
GTF3A-206ENST00000470606 RXRAP19793 462 aa9.82□□□□□ -0.84
GTF3A-206ENST00000470606 FGD1P98174 961 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms