RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 IQCA1Q86XH1 822 aa12.89□□□□□ -0.35
SND1-208ENST00000470463 RTKN2Q8IZC4 609 aa12.89□□□□□ -0.35
SND1-208ENST00000470463 NECAB1Q8N987 351 aa12.89□□□□□ -0.35
SND1-208ENST00000470463 SMARCC2Q8TAQ2 1214 aa12.89□□□□□ -0.35
SND1-208ENST00000470463 ZNF384Q8TF68 577 aa12.89□□□□□ -0.35
SND1-208ENST00000470463 LARP6Q9BRS8 491 aaKnown RBP12.89□□□□□ -0.35
SND1-208ENST00000470463 NBPF3Q9H094 633 aa12.89□□□□□ -0.35
SND1-208ENST00000470463 DCP1AQ9NPI6 582 aaPredicted RBP12.89□□□□□ -0.35
SND1-208ENST00000470463 AATFQ9NY61 560 aaKnown RBP eCLIP12.89□□□□□ -0.35
SND1-208ENST00000470463 TAOK2Q9UL54 1235 aa12.89□□□□□ -0.35
SND1-208ENST00000470463 ZDHHC9Q9Y397 364 aa12.89□□□□□ -0.35
SND1-208ENST00000470463 GAKO14976 1311 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 CHD4Q14839 1912 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 KLF18A0A0U1RQI7 1052 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 CCDC69A6NI79 296 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 MINDY4BA8MYZ0 360 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 B4E1Z4 1266 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 SH2B2O14492 632 aaPredicted RBP12.88□□□□□ -0.35
SND1-208ENST00000470463 ORC4O43929 436 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 USP5P45974 858 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 ANTXR2P58335 489 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 TGFB2P61812 414 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 DYNLL1P63167 89 aaKnown RBP12.88□□□□□ -0.35
SND1-208ENST00000470463 SCRN1Q12765 414 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 STK3Q13188 491 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 TMEM67Q5HYA8 995 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 TTLL6Q8N841 843 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 SDR42E1Q8WUS8 393 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 UBAC1Q9BSL1 405 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 ZSCAN16Q9H4T2 348 aaPredicted RBP12.88□□□□□ -0.35
SND1-208ENST00000470463 TOMM22Q9NS69 142 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 ZSWIM5Q9P217 1185 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 NEDD4P46934 1319 aa12.88□□□□□ -0.35
SND1-208ENST00000470463 A0A0G2JLW4 131 aa12.87□□□□□ -0.35
SND1-208ENST00000470463 GOLGA8BA8MQT2 603 aa12.87□□□□□ -0.35
SND1-208ENST00000470463 IFIT3O14879 490 aaKnown RBP12.87□□□□□ -0.35
SND1-208ENST00000470463 TRAK2O60296 914 aa12.87□□□□□ -0.35
SND1-208ENST00000470463 KDM4AO75164 1064 aa12.87□□□□□ -0.35
SND1-208ENST00000470463 F13A1P00488 732 aa12.87□□□□□ -0.35
SND1-208ENST00000470463 NCLP19338 710 aaKnown RBP12.87□□□□□ -0.35
SND1-208ENST00000470463 GTF2IP78347 998 aa12.87□□□□□ -0.35
SND1-208ENST00000470463 HDLBPQ00341 1268 aaKnown RBP12.87□□□□□ -0.35
SND1-208ENST00000470463 CTDSPL2Q05D32 466 aa12.87□□□□□ -0.35
SND1-208ENST00000470463 ST3GAL1Q11201 340 aa12.87□□□□□ -0.35
SND1-208ENST00000470463 STRIP1Q5VSL9 837 aa12.87□□□□□ -0.35
SND1-208ENST00000470463 CTR9Q6PD62 1173 aa12.87□□□□□ -0.35
SND1-208ENST00000470463 NFXL1Q6ZNB6 911 aa12.87□□□□□ -0.35
SND1-208ENST00000470463 IGDCC4Q8TDY8 1250 aa12.87□□□□□ -0.35
SND1-208ENST00000470463 LRRC2Q9BYS8 371 aa12.87□□□□□ -0.35
SND1-208ENST00000470463 NAP1L2Q9ULW6 460 aaPredicted RBP12.87□□□□□ -0.35
SND1-208ENST00000470463 SLC12A7Q9Y666 1083 aa12.87□□□□□ -0.35
SND1-208ENST00000470463 NID2Q14112 1375 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 USP17L12C9JPN9 530 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 USP17L21D6R901 530 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 H3BQV1 296 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 RIMBP2O15034 1052 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 MBD3O95983 291 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 CALM1P0DP23 149 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 CALM2P0DP24 149 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 CALM3P0DP25 149 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 METAP2P50579 478 aaKnown RBP eCLIP12.86□□□□□ -0.352e-6■■■■■ 27
SND1-208ENST00000470463 PKP1Q13835 747 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 WTAPQ15007 396 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 CCDC93Q567U6 631 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 MCTP1Q6DN14 999 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 APOA5Q6Q788 366 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 HHIPL2Q6UWX4 724 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 NSUN7Q8NE18 718 aaKnown RBP12.86□□□□□ -0.35
SND1-208ENST00000470463 C7orf43Q8WVR3 580 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 PSMD1Q99460 953 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 MCM9Q9NXL9 1143 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 MTMR6Q9Y217 621 aa12.86□□□□□ -0.35
SND1-208ENST00000470463 ROBO3Q96MS0 1386 aa12.85□□□□□ -0.35
SND1-208ENST00000470463 DLEC1Q9Y238 1755 aa12.85□□□□□ -0.35
SND1-208ENST00000470463 PTPDC1A2A3K4 754 aa12.85□□□□□ -0.35
SND1-208ENST00000470463 ZBTB43O43298 467 aa12.85□□□□□ -0.35
SND1-208ENST00000470463 BTDP43251 543 aa12.85□□□□□ -0.35
SND1-208ENST00000470463 KIAA2012Q0VF49 1180 aa12.85□□□□□ -0.35
SND1-208ENST00000470463 RRP12Q5JTH9 1297 aaKnown RBP12.85□□□□□ -0.35
SND1-208ENST00000470463 ATL3Q6DD88 541 aa12.85□□□□□ -0.35
SND1-208ENST00000470463 CYB5R4Q7L1T6 521 aa12.85□□□□□ -0.35
SND1-208ENST00000470463 CHST3Q7LGC8 479 aa12.85□□□□□ -0.35
SND1-208ENST00000470463 ZNF526Q8TF50 670 aaPredicted RBP12.85□□□□□ -0.35
SND1-208ENST00000470463 WASF1Q92558 559 aa12.85□□□□□ -0.35
SND1-208ENST00000470463 GPR101Q96P66 508 aaPredicted RBP12.85□□□□□ -0.35
SND1-208ENST00000470463 LY9Q9HBG7 655 aa12.85□□□□□ -0.35
SND1-208ENST00000470463 MKRN1Q9UHC7 482 aaKnown RBP12.85□□□□□ -0.35
SND1-208ENST00000470463 ISY1Q9ULR0 285 aaKnown RBP12.85□□□□□ -0.35
SND1-208ENST00000470463 MYO3BQ8WXR4 1341 aa12.85□□□□□ -0.35
SND1-208ENST00000470463 VPS37CA5D8V6 355 aaPredicted RBP12.84□□□□□ -0.35
SND1-208ENST00000470463 CHRNA5P30532 468 aa12.84□□□□□ -0.35
SND1-208ENST00000470463 COL9A3Q14050 684 aaPredicted RBP12.84□□□□□ -0.35
SND1-208ENST00000470463 KLHL40Q2TBA0 621 aa12.84□□□□□ -0.35
SND1-208ENST00000470463 C12orf60Q5U649 245 aa12.84□□□□□ -0.35
SND1-208ENST00000470463 TEX11Q8IYF3 940 aa12.84□□□□□ -0.35
SND1-208ENST00000470463 TMEM87AQ8NBN3 555 aa12.84□□□□□ -0.35
SND1-208ENST00000470463 ZSCAN10Q96SZ4 725 aaPredicted RBP12.84□□□□□ -0.35
SND1-208ENST00000470463 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
SND1-208ENST00000470463 USP17L3A6NCW0 530 aa12.83□□□□□ -0.36
SND1-208ENST00000470463 USP17L4A6NCW7 530 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms