RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-208ENST00000470243 EMILIN2Q9BXX0 1053 aa6.46□□□□□ -1.38
SRRM1-208ENST00000470243 OSGEPQ9NPF4 335 aa6.46□□□□□ -1.38
SRRM1-208ENST00000470243 CYP8B1Q9UNU6 501 aa6.46□□□□□ -1.38
SRRM1-208ENST00000470243 APBA3O96018 575 aa6.45□□□□□ -1.38
SRRM1-208ENST00000470243 ATF4P18848 351 aaPredicted RBP6.45□□□□□ -1.38
SRRM1-208ENST00000470243 MAOBP27338 520 aa6.45□□□□□ -1.38
SRRM1-208ENST00000470243 APOBRQ0VD83 1088 aa6.45□□□□□ -1.38
SRRM1-208ENST00000470243 POU4F3Q15319 338 aa6.45□□□□□ -1.38
SRRM1-208ENST00000470243 ILDR2Q71H61 639 aa6.45□□□□□ -1.38
SRRM1-208ENST00000470243 DHX38Q92620 1227 aaKnown RBP6.45□□□□□ -1.38
SRRM1-208ENST00000470243 CORO1BQ9BR76 489 aa6.45□□□□□ -1.38
SRRM1-208ENST00000470243 CCDC86Q9H6F5 360 aaKnown RBP6.45□□□□□ -1.38
SRRM1-208ENST00000470243 GINM1Q9NU53 330 aa6.45□□□□□ -1.38
SRRM1-208ENST00000470243 KCNK4Q9NYG8 393 aa6.45□□□□□ -1.38
SRRM1-208ENST00000470243 EFR3BQ9Y2G0 817 aa6.45□□□□□ -1.38
SRRM1-208ENST00000470243 FAM221AA4D161 298 aa6.44□□□□□ -1.38
SRRM1-208ENST00000470243 CYP11A1P05108 521 aa6.44□□□□□ -1.38
SRRM1-208ENST00000470243 SELPP16109 830 aa6.44□□□□□ -1.38
SRRM1-208ENST00000470243 NASPP49321 788 aaPredicted RBP6.44□□□□□ -1.38
SRRM1-208ENST00000470243 CDK8P49336 464 aa6.44□□□□□ -1.38
SRRM1-208ENST00000470243 PDE3AQ14432 1141 aa6.44□□□□□ -1.38
SRRM1-208ENST00000470243 SEZ6Q53EL9 994 aa6.44□□□□□ -1.38
SRRM1-208ENST00000470243 PRRT3Q5FWE3 981 aa6.44□□□□□ -1.38
SRRM1-208ENST00000470243 PRSS36Q5K4E3 855 aa6.44□□□□□ -1.38
SRRM1-208ENST00000470243 TRAPPC3LQ5T215 181 aa6.44□□□□□ -1.38
SRRM1-208ENST00000470243 KLHL23Q8NBE8 558 aa6.44□□□□□ -1.38
SRRM1-208ENST00000470243 GPBAR1Q8TDU6 330 aa6.44□□□□□ -1.38
SRRM1-208ENST00000470243 UBASH3BQ8TF42 649 aa6.44□□□□□ -1.38
SRRM1-208ENST00000470243 GATAD2BQ8WXI9 593 aa6.44□□□□□ -1.38
SRRM1-208ENST00000470243 UBXN4Q92575 508 aa6.44□□□□□ -1.38
SRRM1-208ENST00000470243 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.44□□□□□ -1.384e-14■□□□□ 9.6
SRRM1-208ENST00000470243 CHD1O14646 1710 aa6.44□□□□□ -1.38
SRRM1-208ENST00000470243 LOC100289279A0A1B0GTE1 492 aa6.43□□□□□ -1.38
SRRM1-208ENST00000470243 CILPO75339 1184 aa6.43□□□□□ -1.38
SRRM1-208ENST00000470243 TRIM37O94972 964 aa6.43□□□□□ -1.38
SRRM1-208ENST00000470243 GTF2F1P35269 517 aaKnown RBP eCLIP6.43□□□□□ -1.38
SRRM1-208ENST00000470243 CCDC84Q86UT8 332 aaPredicted RBP6.43□□□□□ -1.38
SRRM1-208ENST00000470243 VPS37DQ86XT2 251 aa6.43□□□□□ -1.38
SRRM1-208ENST00000470243 NKD1Q969G9 470 aa6.43□□□□□ -1.38
SRRM1-208ENST00000470243 ACSBG1Q96GR2 724 aa6.43□□□□□ -1.38
SRRM1-208ENST00000470243 LRRC3Q9BY71 257 aa6.43□□□□□ -1.38
SRRM1-208ENST00000470243 SMARCA4P51532 1647 aa6.43□□□□□ -1.38
SRRM1-208ENST00000470243 PDS5BQ9NTI5 1447 aa6.42□□□□□ -1.38
SRRM1-208ENST00000470243 A0A0A0MRY4 1105 aa6.42□□□□□ -1.38
SRRM1-208ENST00000470243 ZNF862O60290 1169 aa6.42□□□□□ -1.38
SRRM1-208ENST00000470243 WISP1O95388 367 aa6.42□□□□□ -1.38
SRRM1-208ENST00000470243 DLGAP3O95886 979 aa6.42□□□□□ -1.38
SRRM1-208ENST00000470243 LIG1P18858 919 aa6.42□□□□□ -1.38
SRRM1-208ENST00000470243 ATP2B1P20020 1258 aa6.42□□□□□ -1.38
SRRM1-208ENST00000470243 CD68P34810 354 aaPredicted RBP6.42□□□□□ -1.38
SRRM1-208ENST00000470243 MPP2Q14168 576 aa6.42□□□□□ -1.38
SRRM1-208ENST00000470243 GRIK4Q16099 956 aa6.42□□□□□ -1.38
SRRM1-208ENST00000470243 MAP4K3Q8IVH8 894 aa6.42□□□□□ -1.38
SRRM1-208ENST00000470243 WDR89Q96FK6 387 aaPredicted RBP6.42□□□□□ -1.38
SRRM1-208ENST00000470243 DNAJC2Q99543 621 aaKnown RBP6.42□□□□□ -1.38
SRRM1-208ENST00000470243 CACNA2D2Q9NY47 1150 aa6.42□□□□□ -1.38
SRRM1-208ENST00000470243 BPNT1O95861 308 aa6.41□□□□□ -1.38
SRRM1-208ENST00000470243 SOX9P48436 509 aa6.41□□□□□ -1.38
SRRM1-208ENST00000470243 CYB5RLQ6IPT4 315 aa6.41□□□□□ -1.38
SRRM1-208ENST00000470243 CCDC81Q6ZN84 652 aa6.41□□□□□ -1.38
SRRM1-208ENST00000470243 REC114Q7Z4M0 266 aa6.41□□□□□ -1.38
SRRM1-208ENST00000470243 SLITRK4Q8IW52 837 aa6.41□□□□□ -1.38
SRRM1-208ENST00000470243 FMR1NBQ8N0W7 255 aaPredicted RBP6.41□□□□□ -1.38
SRRM1-208ENST00000470243 DTWD1Q8N5C7 304 aa6.41□□□□□ -1.38
SRRM1-208ENST00000470243 SEC16BQ96JE7 1060 aa6.41□□□□□ -1.38
SRRM1-208ENST00000470243 SPATA32Q96LK8 384 aa6.41□□□□□ -1.38
SRRM1-208ENST00000470243 KRT82Q9NSB4 513 aa6.41□□□□□ -1.38
SRRM1-208ENST00000470243 PPT2Q9UMR5 302 aa6.41□□□□□ -1.38
SRRM1-208ENST00000470243 PCDHA4Q9UN74 947 aa6.41□□□□□ -1.38
SRRM1-208ENST00000470243 SPDYE3A6NKU9 549 aa6.4□□□□□ -1.38
SRRM1-208ENST00000470243 DLL1O00548 723 aa6.4□□□□□ -1.38
SRRM1-208ENST00000470243 RAC1P63000 192 aa6.4□□□□□ -1.38
SRRM1-208ENST00000470243 RPL6Q02878 288 aaKnown RBP6.4□□□□□ -1.38
SRRM1-208ENST00000470243 CWF19L2Q2TBE0 894 aaKnown RBP6.4□□□□□ -1.38
SRRM1-208ENST00000470243 WIPI1Q5MNZ9 446 aaPredicted RBP6.4□□□□□ -1.38
SRRM1-208ENST00000470243 LRFN4Q6PJG9 635 aa6.4□□□□□ -1.38
SRRM1-208ENST00000470243 FBXO11Q86XK2 927 aa6.4□□□□□ -1.38
SRRM1-208ENST00000470243 KRTAP9-9Q9BYP9 154 aa6.4□□□□□ -1.38
SRRM1-208ENST00000470243 KRTAP9-4Q9BYQ2 154 aa6.4□□□□□ -1.38
SRRM1-208ENST00000470243 BRMS1Q9HCU9 246 aa6.4□□□□□ -1.38
SRRM1-208ENST00000470243 POLR3KQ9Y2Y1 108 aaPredicted RBP6.4□□□□□ -1.38
SRRM1-208ENST00000470243 GRIN3BO60391 1043 aa6.39□□□□□ -1.39
SRRM1-208ENST00000470243 EIF4EBP3O60516 100 aaPredicted RBP6.39□□□□□ -1.39
SRRM1-208ENST00000470243 SSBP05455 408 aaKnown RBP eCLIP6.39□□□□□ -1.39
SRRM1-208ENST00000470243 MCM4P33991 863 aa6.39□□□□□ -1.39
SRRM1-208ENST00000470243 TRIM28Q13263 835 aaKnown RBP6.39□□□□□ -1.39
SRRM1-208ENST00000470243 INPP5AQ14642 412 aa6.39□□□□□ -1.39
SRRM1-208ENST00000470243 SCARA3Q6AZY7 606 aa6.39□□□□□ -1.39
SRRM1-208ENST00000470243 PLPPR2Q96GM1 343 aa6.39□□□□□ -1.39
SRRM1-208ENST00000470243 WDR18Q9BV38 432 aa6.39□□□□□ -1.39
SRRM1-208ENST00000470243 MRVI1Q9Y6F6 885 aa6.39□□□□□ -1.39
SRRM1-208ENST00000470243 ROBO2Q9HCK4 1378 aa6.39□□□□□ -1.39
SRRM1-208ENST00000470243 BAZ1BQ9UIG0 1483 aaKnown RBP6.39□□□□□ -1.39
SRRM1-208ENST00000470243 LOC105371045A0A1W2PR82 267 aa6.38□□□□□ -1.39
SRRM1-208ENST00000470243 DCDC2CA8MYV0 355 aa6.38□□□□□ -1.39
SRRM1-208ENST00000470243 CLCQ05315 142 aa6.38□□□□□ -1.39
SRRM1-208ENST00000470243 COL9A2Q14055 689 aaPredicted RBP6.38□□□□□ -1.39
SRRM1-208ENST00000470243 DUOXA2Q1HG44 320 aa6.38□□□□□ -1.39
SRRM1-208ENST00000470243 KIF4BQ2VIQ3 1234 aa6.38□□□□□ -1.39
SRRM1-208ENST00000470243 GK5Q6ZS86 529 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms