RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 LARGE2Q8N3Y3 721 aa11.66□□□□□ -0.54
SEMA4D-215ENST00000469653 MYH13Q9UKX3 1938 aa11.66□□□□□ -0.54
SEMA4D-215ENST00000469653 G3V3G9 751 aa11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 HIBADHP31937 336 aaKnown RBP11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 NAA30Q147X3 362 aaPredicted RBP11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 DCAF8Q5TAQ9 597 aa11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 ZNF804AQ7Z570 1209 aa11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 STK11IPQ8N1F8 1099 aa11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 ANKRD7Q92527 254 aa11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 U2AF2P26368 475 aaKnown RBP eCLIP11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 PHKA1P46020 1223 aa11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 CCDC102BQ68D86 513 aa11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 FBXO33Q7Z6M2 555 aa11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 PDCL2Q8N4E4 241 aa11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 VPS33BQ9H267 617 aa11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 DBNDD1Q9H9R9 158 aa11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 DICER1Q9UPY3 1922 aaKnown RBP11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 DNM1Q05193 864 aaKnown RBP11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 CCDC158Q5M9N0 1113 aa11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 AXDND1Q5T1B0 1012 aaPredicted RBP11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 TFIP11Q9UBB9 837 aaKnown RBP11.65□□□□□ -0.54
SEMA4D-215ENST00000469653 RAD50Q92878 1312 aa11.65□□□□□ -0.55
SEMA4D-215ENST00000469653 COL4A5P29400 1685 aa11.64□□□□□ -0.55
SEMA4D-215ENST00000469653 TTC39AQ5SRH9 613 aa11.64□□□□□ -0.55
SEMA4D-215ENST00000469653 NECAB1Q8N987 351 aa11.64□□□□□ -0.55
SEMA4D-215ENST00000469653 IQSEC3Q9UPP2 1182 aaPredicted RBP11.64□□□□□ -0.55
SEMA4D-215ENST00000469653 DCAF8L1A6NGE4 600 aa11.64□□□□□ -0.55
SEMA4D-215ENST00000469653 CWC27Q6UX04 472 aaKnown RBP11.64□□□□□ -0.55
SEMA4D-215ENST00000469653 GTPBP4Q9BZE4 634 aaKnown RBP11.64□□□□□ -0.55
SEMA4D-215ENST00000469653 LSG1Q9H089 658 aaKnown RBP11.64□□□□□ -0.55
SEMA4D-215ENST00000469653 SGSM2O43147 1006 aa11.64□□□□□ -0.55
SEMA4D-215ENST00000469653 CTIFO43310 598 aaKnown RBP11.64□□□□□ -0.55
SEMA4D-215ENST00000469653 LMNB1P20700 586 aa11.64□□□□□ -0.55
SEMA4D-215ENST00000469653 COA1Q9GZY4 146 aa11.64□□□□□ -0.55
SEMA4D-215ENST00000469653 CD209Q9NNX6 404 aa11.64□□□□□ -0.55
SEMA4D-215ENST00000469653 ECE2O60344 883 aa11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 PI4K2BQ8TCG2 481 aa11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 GPATCH3Q96I76 525 aa11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 GNL3LQ9NVN8 582 aaKnown RBP11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 LIMCH1Q9UPQ0 1083 aa11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 MTMR6Q9Y217 621 aa11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 NDUFB9Q9Y6M9 179 aa11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 ERICH4A6NGS2 130 aa11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 KIF4AO95239 1232 aa11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 JDP2Q8WYK2 163 aa11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 C16orf45Q96MC5 204 aaPredicted RBP11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 ECHDC1Q9NTX5 307 aa11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 AKAP11Q9UKA4 1901 aa11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 SCN9AQ15858 1988 aa11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 DHX16O60231 1041 aaKnown RBP11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 EP400NLQ6ZTU2 488 aa11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 NIM1KQ8IY84 436 aa11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 SMC3Q9UQE7 1217 aa11.63□□□□□ -0.55
SEMA4D-215ENST00000469653 EPB41L2O43491 1005 aaKnown RBP11.62□□□□□ -0.55
SEMA4D-215ENST00000469653 IL1R1P14778 569 aa11.62□□□□□ -0.55
SEMA4D-215ENST00000469653 PTGS1P23219 599 aa11.62□□□□□ -0.55
SEMA4D-215ENST00000469653 ST3GAL1Q11201 340 aa11.62□□□□□ -0.55
SEMA4D-215ENST00000469653 ATL2Q8NHH9 583 aa11.62□□□□□ -0.55
SEMA4D-215ENST00000469653 ERCC4Q92889 916 aaPredicted RBP11.62□□□□□ -0.55
SEMA4D-215ENST00000469653 ZNF771Q7L3S4 317 aaPredicted RBP11.62□□□□□ -0.55
SEMA4D-215ENST00000469653 TDRD7Q8NHU6 1098 aaKnown RBP11.62□□□□□ -0.55
SEMA4D-215ENST00000469653 KCNQ5Q9NR82 932 aa11.62□□□□□ -0.55
SEMA4D-215ENST00000469653 DIAPH3Q9NSV4 1193 aa11.62□□□□□ -0.55
SEMA4D-215ENST00000469653 RNF181Q9P0P0 153 aa11.62□□□□□ -0.55
SEMA4D-215ENST00000469653 AOX1Q06278 1338 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 UQCRFS1P1P0C7P4 283 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 GJB2P29033 226 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 SCARF1Q14162 830 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 PODNQ7Z5L7 613 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 CCDC83Q8IWF9 413 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 BOLA2Q9H3K6 86 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 JAG2Q9Y219 1238 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 TTC41PQ6P2S7 1318 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 YDJCA8MPS7 323 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 MCAMP43121 646 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 RASGRF1Q13972 1273 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 C9orf131Q5VYM1 1079 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 ZNRF3Q9ULT6 936 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 TIAM2Q8IVF5 1701 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 GOLGA6L4A6NEF3 574 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 ATP5JP18859 108 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 PI16Q6UXB8 463 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 ZNF512BQ96KM6 892 aaPredicted RBP11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 SNRKQ9NRH2 765 aa11.61□□□□□ -0.55
SEMA4D-215ENST00000469653 PSME4Q14997 1843 aa11.6□□□□□ -0.55
SEMA4D-215ENST00000469653 NCBP1Q09161 790 aaKnown RBP11.6□□□□□ -0.55
SEMA4D-215ENST00000469653 LRMPQ12912 555 aa11.6□□□□□ -0.55
SEMA4D-215ENST00000469653 CHAF1AQ13111 956 aaPredicted RBP11.6□□□□□ -0.55
SEMA4D-215ENST00000469653 ADCK5Q3MIX3 580 aa11.6□□□□□ -0.55
SEMA4D-215ENST00000469653 KIF20AO95235 890 aa11.6□□□□□ -0.55
SEMA4D-215ENST00000469653 CASTP20810 708 aaKnown RBP11.6□□□□□ -0.55
SEMA4D-215ENST00000469653 LUZP1Q86V48 1076 aa11.6□□□□□ -0.55
SEMA4D-215ENST00000469653 SPATA5Q8NB90 893 aa11.6□□□□□ -0.55
SEMA4D-215ENST00000469653 HMG20BQ9P0W2 317 aa11.6□□□□□ -0.55
SEMA4D-215ENST00000469653 PNMA2Q9UL42 364 aa11.6□□□□□ -0.55
SEMA4D-215ENST00000469653 DENND2AQ9ULE3 1009 aa11.6□□□□□ -0.55
SEMA4D-215ENST00000469653 COL1A1P02452 1464 aaPredicted RBP11.6□□□□□ -0.55
SEMA4D-215ENST00000469653 SEMA3EO15041 775 aa11.6□□□□□ -0.55
SEMA4D-215ENST00000469653 GTF2IP78347 998 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms