RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 LCORLQ8N3X6 602 aa11.26□□□□□ -0.61
APOBEC1-202ENST00000467171 BRF1Q92994 677 aa11.26□□□□□ -0.61
APOBEC1-202ENST00000467171 NSUN4Q96CB9 384 aaKnown RBP11.26□□□□□ -0.61
APOBEC1-202ENST00000467171 LARP6Q9BRS8 491 aaKnown RBP11.26□□□□□ -0.61
APOBEC1-202ENST00000467171 MTA3Q9BTC8 594 aa11.26□□□□□ -0.61
APOBEC1-202ENST00000467171 NAPBQ9H115 298 aa11.26□□□□□ -0.61
APOBEC1-202ENST00000467171 STX6O43752 255 aa11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 UFL1O94874 794 aa11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 SYT1P21579 422 aa11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 GJB2P29033 226 aa11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 HAND2P61296 217 aa11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 FGD1P98174 961 aa11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 EZH2Q15910 746 aaKnown RBP11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 TBC1D10CQ8IV04 446 aa11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 NECAB1Q8N987 351 aa11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 SMARCC2Q8TAQ2 1214 aa11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 TBC1D16Q8TBP0 767 aa11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 ZNF384Q8TF68 577 aa11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 MASTLQ96GX5 879 aa11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 NBPF3Q9H094 633 aa11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 CNNM2Q9H8M5 875 aa11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 ANO8Q9HCE9 1232 aaPredicted RBP11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 ANAPC4Q9UJX5 808 aa11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 NSFL1CQ9UNZ2 370 aaKnown RBP11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 SLC4A4Q9Y6R1 1079 aa11.25□□□□□ -0.61
APOBEC1-202ENST00000467171 PRC1O43663 620 aa11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 PRKAB2O43741 272 aa11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 TRAK2O60296 914 aa11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 TBC1D12O60347 775 aa11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 ZSCAN22P10073 491 aaPredicted RBP11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 PCP11498 1178 aaKnown RBP11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 NT5C2P49902 561 aa11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 ANTXR2P58335 489 aa11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 GSTO1P78417 241 aa11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 MECOMQ03112 1051 aa11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 EN1Q05925 392 aaPredicted RBP11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 STYK1Q6J9G0 422 aa11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 ADGRA1Q86SQ6 560 aa11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 CERS3Q8IU89 383 aa11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 STAG1Q8WVM7 1258 aa11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 TMEM87BQ96K49 555 aa11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 RNF41Q9H4P4 317 aaPredicted RBP11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 CD209Q9NNX6 404 aa11.24□□□□□ -0.61
APOBEC1-202ENST00000467171 TNS1Q9HBL0 1735 aaKnown RBP11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 NRXN2Q9P2S2 1712 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 DOCK2Q92608 1830 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 PDIA3P30101 505 aaKnown RBP11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 BAG6P46379 1132 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 TDO2P48775 406 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 PPP4CP60510 307 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 HMGN5P82970 282 aaKnown RBP11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 SCRN1Q12765 414 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 CHAF1AQ13111 956 aaPredicted RBP11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 AKNAD1Q5T1N1 836 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 POTEEQ6S8J3 1075 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 MIGA1Q8NAN2 632 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 RGS22Q8NE09 1264 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 TBC1D22AQ8WUA7 517 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 KRT23Q9C075 422 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 POLLQ9UGP5 575 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 MTMR6Q9Y217 621 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 ATP6V1DQ9Y5K8 247 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 FAM205AQ6ZU69 1335 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 A0A1B0GUL6 1792 aa11.23□□□□□ -0.61
APOBEC1-202ENST00000467171 SH2B2O14492 632 aaPredicted RBP11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 LDHBP07195 334 aaKnown RBP11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 LDHCP07864 332 aa11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 FGRP09769 529 aa11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 PRDX5P30044 214 aa11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 LIFRP42702 1097 aa11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 PPARAQ07869 468 aa11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 APOBRQ0VD83 1088 aa11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 SF3B2Q13435 895 aaKnown RBP11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 SGMS1Q86VZ5 419 aa11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 LRRC2Q9BYS8 371 aa11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 CRNKL1Q9BZJ0 848 aaKnown RBP11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 COA1Q9GZY4 146 aa11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 TMX4Q9H1E5 349 aaPredicted RBP11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 ATP8A2Q9NTI2 1148 aa11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 ANGEL1Q9UNK9 670 aaKnown RBP11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 SUGT1Q9Y2Z0 365 aa11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 KIF3AQ9Y496 699 aa11.22□□□□□ -0.61
APOBEC1-202ENST00000467171 DUOX1Q9NRD9 1551 aa11.21□□□□□ -0.61
APOBEC1-202ENST00000467171 DHX16O60231 1041 aaKnown RBP11.21□□□□□ -0.61
APOBEC1-202ENST00000467171 F13A1P00488 732 aa11.21□□□□□ -0.61
APOBEC1-202ENST00000467171 DYNLL1P63167 89 aaKnown RBP11.21□□□□□ -0.61
APOBEC1-202ENST00000467171 SBK1Q52WX2 424 aa11.21□□□□□ -0.61
APOBEC1-202ENST00000467171 LARP1BQ659C4 914 aaKnown RBP11.21□□□□□ -0.61
APOBEC1-202ENST00000467171 MCTP1Q6DN14 999 aa11.21□□□□□ -0.61
APOBEC1-202ENST00000467171 MFSD6Q6ZSS7 791 aa11.21□□□□□ -0.61
APOBEC1-202ENST00000467171 CYB5R4Q7L1T6 521 aa11.21□□□□□ -0.61
APOBEC1-202ENST00000467171 SLC51AQ86UW1 340 aa11.21□□□□□ -0.61
APOBEC1-202ENST00000467171 DZIP1Q86YF9 867 aaKnown RBP11.21□□□□□ -0.61
APOBEC1-202ENST00000467171 MPNDQ8N594 471 aa11.21□□□□□ -0.61
APOBEC1-202ENST00000467171 IGDCC4Q8TDY8 1250 aa11.21□□□□□ -0.61
APOBEC1-202ENST00000467171 LMBRD1Q9NUN5 540 aa11.21□□□□□ -0.61
APOBEC1-202ENST00000467171 NEDD4P46934 1319 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 B4E1Z4 1266 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 H0YIN7 160 aa11.2□□□□□ -0.62
APOBEC1-202ENST00000467171 C6orf229H3BNL8 230 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms