RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 TFF2Q03403 129 aa16.3■□□□□ 0.2
UBR4-210ENST00000466969 ZHX2Q9Y6X8 837 aa16.3■□□□□ 0.2
UBR4-210ENST00000466969 RPAP1Q9BWH6 1393 aaPredicted RBP16.29■□□□□ 0.2
UBR4-210ENST00000466969 PRR33A8MZF0 331 aa16.29■□□□□ 0.2
UBR4-210ENST00000466969 AK9Q5TCS8 1911 aa16.28■□□□□ 0.2
UBR4-210ENST00000466969 TAF5LO75529 589 aa16.28■□□□□ 0.2
UBR4-210ENST00000466969 XRCC5P13010 732 aaKnown RBP16.28■□□□□ 0.2
UBR4-210ENST00000466969 ADGRE1Q14246 886 aa16.28■□□□□ 0.2
UBR4-210ENST00000466969 FKBP1CQ5VVH2 108 aa16.28■□□□□ 0.2
UBR4-210ENST00000466969 UIMC1Q96RL1 719 aa16.28■□□□□ 0.2
UBR4-210ENST00000466969 NUDT12Q9BQG2 462 aa16.28■□□□□ 0.2
UBR4-210ENST00000466969 PICK1Q9NRD5 415 aa16.28■□□□□ 0.2
UBR4-210ENST00000466969 GCLCP48506 637 aaPredicted RBP16.27■□□□□ 0.2
UBR4-210ENST00000466969 KRT24Q2M2I5 525 aa16.27■□□□□ 0.2
UBR4-210ENST00000466969 CCDC129Q6ZRS4 1044 aa16.27■□□□□ 0.2
UBR4-210ENST00000466969 SOCS4Q8WXH5 440 aa16.27■□□□□ 0.2
UBR4-210ENST00000466969 PDLIM7Q9NR12 457 aa16.27■□□□□ 0.2
UBR4-210ENST00000466969 AGTPBP1Q9UPW5 1226 aa16.27■□□□□ 0.2
UBR4-210ENST00000466969 MYH3P11055 1940 aa16.27■□□□□ 0.19
UBR4-210ENST00000466969 DNM1LO00429 736 aa16.26■□□□□ 0.19
UBR4-210ENST00000466969 ITGA6P23229 1130 aa16.26■□□□□ 0.19
UBR4-210ENST00000466969 SKIV2LQ15477 1246 aaKnown RBP16.26■□□□□ 0.19
UBR4-210ENST00000466969 MICALL1Q8N3F8 863 aa16.26■□□□□ 0.19
UBR4-210ENST00000466969 TEKT1Q969V4 418 aa16.26■□□□□ 0.19
UBR4-210ENST00000466969 KCNH6Q9H252 994 aa16.26■□□□□ 0.19
UBR4-210ENST00000466969 PI4K2BG5E9Z4 385 aa16.25■□□□□ 0.19
UBR4-210ENST00000466969 ST18O60284 1047 aa16.25■□□□□ 0.19
UBR4-210ENST00000466969 HDLBPQ00341 1268 aaKnown RBP16.25■□□□□ 0.19
UBR4-210ENST00000466969 SLC39A5Q6ZMH5 540 aa16.25■□□□□ 0.19
UBR4-210ENST00000466969 KHSRPQ92945 711 aaKnown RBP eCLIP16.25■□□□□ 0.19
UBR4-210ENST00000466969 FBXL18Q96ME1 805 aa16.25■□□□□ 0.19
UBR4-210ENST00000466969 AFG3L2Q9Y4W6 797 aa16.25■□□□□ 0.19
UBR4-210ENST00000466969 MAPK8IP3Q9UPT6 1336 aa16.24■□□□□ 0.19
UBR4-210ENST00000466969 TRIM43BA6NCK2 446 aa16.24■□□□□ 0.19
UBR4-210ENST00000466969 SH3RF1Q7Z6J0 888 aa16.24■□□□□ 0.19
UBR4-210ENST00000466969 LPAR1Q92633 364 aa16.24■□□□□ 0.19
UBR4-210ENST00000466969 TRIM43Q96BQ3 446 aaPredicted RBP16.24■□□□□ 0.19
UBR4-210ENST00000466969 ERC2O15083 957 aa16.23■□□□□ 0.19
UBR4-210ENST00000466969 MSCO60682 206 aa16.23■□□□□ 0.19
UBR4-210ENST00000466969 HOXB7P09629 217 aa16.23■□□□□ 0.19
UBR4-210ENST00000466969 PTPRAP18433 802 aa16.23■□□□□ 0.19
UBR4-210ENST00000466969 EPHB4P54760 987 aa16.23■□□□□ 0.19
UBR4-210ENST00000466969 TRIM60Q495X7 471 aa16.23■□□□□ 0.19
UBR4-210ENST00000466969 SCYL3Q8IZE3 742 aa16.23■□□□□ 0.19
UBR4-210ENST00000466969 FAM151AQ8WW52 585 aa16.23■□□□□ 0.19
UBR4-210ENST00000466969 PBX4Q9BYU1 374 aa16.23■□□□□ 0.19
UBR4-210ENST00000466969 ZDBF2Q9HCK1 2354 aa16.23■□□□□ 0.19
UBR4-210ENST00000466969 TRIM75PA6NK02 468 aa16.22■□□□□ 0.19
UBR4-210ENST00000466969 FPGSQ05932 587 aa16.22■□□□□ 0.19
UBR4-210ENST00000466969 CSPP1Q1MSJ5 1256 aa16.22■□□□□ 0.19
UBR4-210ENST00000466969 ZDHHC15Q96MV8 337 aa16.22■□□□□ 0.19
UBR4-210ENST00000466969 PLEKHF1Q96S99 279 aa16.22■□□□□ 0.19
UBR4-210ENST00000466969 METTL22Q9BUU2 404 aaPredicted RBP16.22■□□□□ 0.19
UBR4-210ENST00000466969 WDFY4Q6ZS81 3184 aa16.22■□□□□ 0.19
UBR4-210ENST00000466969 PLXNB2O15031 1838 aa16.22■□□□□ 0.19
UBR4-210ENST00000466969 FRMPD3Q5JV73 1810 aa16.22■□□□□ 0.19
UBR4-210ENST00000466969 TREML2Q5T2D2 321 aa16.21■□□□□ 0.19
UBR4-210ENST00000466969 TDRD7Q8NHU6 1098 aaKnown RBP16.21■□□□□ 0.19
UBR4-210ENST00000466969 PNNQ9H307 717 aaKnown RBP16.21■□□□□ 0.19
UBR4-210ENST00000466969 DDX20Q9UHI6 824 aaKnown RBP16.21■□□□□ 0.19
UBR4-210ENST00000466969 TACC3Q9Y6A5 838 aa16.21■□□□□ 0.19
UBR4-210ENST00000466969 MYBBP1AQ9BQG0 1328 aaKnown RBP16.2■□□□□ 0.18
UBR4-210ENST00000466969 RAG1P15918 1043 aa16.2■□□□□ 0.18
UBR4-210ENST00000466969 CNGA1P29973 690 aa16.2■□□□□ 0.18
UBR4-210ENST00000466969 PBX2P40425 430 aa16.2■□□□□ 0.18
UBR4-210ENST00000466969 RGS2P41220 211 aa16.2■□□□□ 0.18
UBR4-210ENST00000466969 PABPC4Q13310 644 aaKnown RBP eCLIP16.2■□□□□ 0.18
UBR4-210ENST00000466969 CCL14Q16627 93 aa16.2■□□□□ 0.18
UBR4-210ENST00000466969 HERVK_113Q902F9 699 aa16.2■□□□□ 0.18
UBR4-210ENST00000466969 PHAXQ9H814 394 aaKnown RBP16.2■□□□□ 0.18
UBR4-210ENST00000466969 KBTBD13C9JR72 458 aa16.19■□□□□ 0.18
UBR4-210ENST00000466969 TCP10Q12799 353 aa16.19■□□□□ 0.18
UBR4-210ENST00000466969 GJC2Q5T442 439 aaPredicted RBP16.19■□□□□ 0.18
UBR4-210ENST00000466969 ARRDC4Q8NCT1 418 aa16.19■□□□□ 0.18
UBR4-210ENST00000466969 MSRAQ9UJ68 235 aa16.19■□□□□ 0.18
UBR4-210ENST00000466969 TIMELESSQ9UNS1 1208 aa16.19■□□□□ 0.18
UBR4-210ENST00000466969 CFAP54Q96N23 3096 aa16.18■□□□□ 0.18
UBR4-210ENST00000466969 REV3LO60673 3130 aa16.18■□□□□ 0.18
UBR4-210ENST00000466969 PTPRFP10586 1907 aa16.18■□□□□ 0.18
UBR4-210ENST00000466969 RLFQ13129 1914 aa16.18■□□□□ 0.18
UBR4-210ENST00000466969 TLL1O43897 1013 aa16.18■□□□□ 0.18
UBR4-210ENST00000466969 DDX58O95786 925 aaKnown RBP16.18■□□□□ 0.18
UBR4-210ENST00000466969 ITGB8P26012 769 aa16.18■□□□□ 0.18
UBR4-210ENST00000466969 HIBADHP31937 336 aaKnown RBP16.18■□□□□ 0.18
UBR4-210ENST00000466969 RIPK4P57078 832 aa16.18■□□□□ 0.18
UBR4-210ENST00000466969 SNX17Q15036 470 aa16.18■□□□□ 0.18
UBR4-210ENST00000466969 GRIK5Q16478 980 aa16.18■□□□□ 0.18
UBR4-210ENST00000466969 MFSD14CQ5VZR4 134 aa16.18■□□□□ 0.18
UBR4-210ENST00000466969 APOBEC3HQ6NTF7 200 aaKnown RBP16.18■□□□□ 0.18
UBR4-210ENST00000466969 CCAR1Q8IX12 1150 aaKnown RBP16.18■□□□□ 0.18
UBR4-210ENST00000466969 COG5Q9UP83 839 aa16.18■□□□□ 0.18
UBR4-210ENST00000466969 LAS1LQ9Y4W2 734 aaKnown RBP16.18■□□□□ 0.18
UBR4-210ENST00000466969 PLXNA1Q9UIW2 1896 aa16.18■□□□□ 0.18
UBR4-210ENST00000466969 ANKRD18BA2A2Z9 1011 aa16.17■□□□□ 0.18
UBR4-210ENST00000466969 PLIN1O60240 522 aa16.17■□□□□ 0.18
UBR4-210ENST00000466969 RAB30Q15771 203 aa16.17■□□□□ 0.18
UBR4-210ENST00000466969 PROCA1Q8NCQ7 364 aaPredicted RBP16.17■□□□□ 0.18
UBR4-210ENST00000466969 TBC1D22AQ8WUA7 517 aa16.17■□□□□ 0.18
UBR4-210ENST00000466969 APBA2Q99767 749 aa16.17■□□□□ 0.18
UBR4-210ENST00000466969 MRIQ9BWK5 157 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms