RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 USP5P45974 858 aa18.2■□□□□ 0.5
NPHP4-205ENST00000466897 NFIAQ12857 509 aa18.2■□□□□ 0.5
NPHP4-205ENST00000466897 SULF1Q8IWU6 871 aa18.2■□□□□ 0.5
NPHP4-205ENST00000466897 TGFBRAP1Q8WUH2 860 aa18.2■□□□□ 0.5
NPHP4-205ENST00000466897 OSBPL5Q9H0X9 879 aaPredicted RBP18.2■□□□□ 0.5
NPHP4-205ENST00000466897 IL25Q9H293 177 aa18.2■□□□□ 0.5
NPHP4-205ENST00000466897 DDX4Q9NQI0 724 aaKnown RBP18.2■□□□□ 0.5
NPHP4-205ENST00000466897 SLC4A4Q9Y6R1 1079 aa18.2■□□□□ 0.5
NPHP4-205ENST00000466897 GSG1L2A8MUP6 293 aa18.19■□□□□ 0.5
NPHP4-205ENST00000466897 EIF5BO60841 1220 aaKnown RBP18.19■□□□□ 0.5
NPHP4-205ENST00000466897 POTEIP0CG38 1075 aa18.19■□□□□ 0.5
NPHP4-205ENST00000466897 POTEJP0CG39 1038 aa18.19■□□□□ 0.5
NPHP4-205ENST00000466897 CACNB3P54284 484 aa18.19■□□□□ 0.5
NPHP4-205ENST00000466897 CCDC129Q6ZRS4 1044 aa18.19■□□□□ 0.5
NPHP4-205ENST00000466897 CDC37L1Q7L3B6 337 aa18.19■□□□□ 0.5
NPHP4-205ENST00000466897 DDRGK1Q96HY6 314 aa18.19■□□□□ 0.5
NPHP4-205ENST00000466897 DSCC1Q9BVC3 393 aa18.19■□□□□ 0.5
NPHP4-205ENST00000466897 DEFB129Q9H1M3 183 aa18.19■□□□□ 0.5
NPHP4-205ENST00000466897 DCP1AQ9NPI6 582 aaPredicted RBP18.19■□□□□ 0.5
NPHP4-205ENST00000466897 TAOK2Q9UL54 1235 aa18.19■□□□□ 0.5
NPHP4-205ENST00000466897 TCP10L2B9ZVM9 353 aa18.18■□□□□ 0.5
NPHP4-205ENST00000466897 FOXP2O15409 715 aa18.18■□□□□ 0.5
NPHP4-205ENST00000466897 HSPD1P10809 573 aaKnown RBP18.18■□□□□ 0.5
NPHP4-205ENST00000466897 RASA3Q14644 834 aa18.18■□□□□ 0.5
NPHP4-205ENST00000466897 ALX1Q15699 326 aa18.18■□□□□ 0.5
NPHP4-205ENST00000466897 CHADLQ6NUI6 762 aa18.18■□□□□ 0.5
NPHP4-205ENST00000466897 KRT26Q7Z3Y9 468 aa18.18■□□□□ 0.5
NPHP4-205ENST00000466897 SDR42E1Q8WUS8 393 aa18.18■□□□□ 0.5
NPHP4-205ENST00000466897 NACAP1Q9BZK3 213 aa18.18■□□□□ 0.5
NPHP4-205ENST00000466897 DHX36Q9H2U1 1008 aaKnown RBP18.18■□□□□ 0.5
NPHP4-205ENST00000466897 CLEC11AQ9Y240 323 aa18.18■□□□□ 0.5
NPHP4-205ENST00000466897 EPB41L2O43491 1005 aaKnown RBP18.17■□□□□ 0.5
NPHP4-205ENST00000466897 PRKAB2O43741 272 aa18.17■□□□□ 0.5
NPHP4-205ENST00000466897 TOMM70O94826 608 aa18.17■□□□□ 0.5
NPHP4-205ENST00000466897 PICALMQ13492 652 aa18.17■□□□□ 0.5
NPHP4-205ENST00000466897 RBM46Q8TBY0 533 aaKnown RBP18.17■□□□□ 0.5
NPHP4-205ENST00000466897 PAPPA2Q9BXP8 1791 aa18.17■□□□□ 0.5
NPHP4-205ENST00000466897 SBK1Q52WX2 424 aa18.16■□□□□ 0.5
NPHP4-205ENST00000466897 VPS53Q5VIR6 699 aa18.16■□□□□ 0.5
NPHP4-205ENST00000466897 MAPKAPK5Q8IW41 473 aa18.16■□□□□ 0.5
NPHP4-205ENST00000466897 IFNL3Q8IZI9 196 aa18.16■□□□□ 0.5
NPHP4-205ENST00000466897 TEPSINQ96N21 525 aa18.16■□□□□ 0.5
NPHP4-205ENST00000466897 EPB41L4AQ9HCS5 686 aaPredicted RBP18.16■□□□□ 0.5
NPHP4-205ENST00000466897 ARPP21Q9UBL0 812 aaPredicted RBP18.16■□□□□ 0.5
NPHP4-205ENST00000466897 TCP10Q12799 353 aa18.15■□□□□ 0.5
NPHP4-205ENST00000466897 MAP1SQ66K74 1059 aaPredicted RBP18.15■□□□□ 0.5
NPHP4-205ENST00000466897 SMC1BQ8NDV3 1235 aa18.15■□□□□ 0.5
NPHP4-205ENST00000466897 HOOK2Q96ED9 719 aa18.15■□□□□ 0.5
NPHP4-205ENST00000466897 TMEM39BQ9GZU3 492 aa18.15■□□□□ 0.5
NPHP4-205ENST00000466897 ROBO3Q96MS0 1386 aa18.15■□□□□ 0.5
NPHP4-205ENST00000466897 ADM5C9JUS6 153 aa18.14■□□□□ 0.49
NPHP4-205ENST00000466897 REC8O95072 547 aa18.14■□□□□ 0.49
NPHP4-205ENST00000466897 APPP05067 770 aa18.14■□□□□ 0.49
NPHP4-205ENST00000466897 C8orf34Q49A92 452 aa18.14■□□□□ 0.49
NPHP4-205ENST00000466897 KIAA1211Q6ZU35 1233 aa18.14■□□□□ 0.49
NPHP4-205ENST00000466897 SH3BP5LQ7L8J4 393 aa18.14■□□□□ 0.49
NPHP4-205ENST00000466897 TTC6Q86TZ1 520 aa18.14■□□□□ 0.49
NPHP4-205ENST00000466897 METTL16Q86W50 562 aaKnown RBP18.14■□□□□ 0.49
NPHP4-205ENST00000466897 ZFPM1Q8IX07 1006 aa18.14■□□□□ 0.49
NPHP4-205ENST00000466897 AMOTL1Q8IY63 956 aa18.14■□□□□ 0.49
NPHP4-205ENST00000466897 MAP4K1Q92918 833 aa18.14■□□□□ 0.49
NPHP4-205ENST00000466897 NAPBQ9H115 298 aa18.14■□□□□ 0.49
NPHP4-205ENST00000466897 EHD4Q9H223 541 aa18.14■□□□□ 0.49
NPHP4-205ENST00000466897 MCM9Q9NXL9 1143 aa18.14■□□□□ 0.49
NPHP4-205ENST00000466897 SSC5DA1L4H1 1573 aa18.13■□□□□ 0.49
NPHP4-205ENST00000466897 DDTLA6NHG4 134 aaPredicted RBP18.13■□□□□ 0.49
NPHP4-205ENST00000466897 ITGBL1O95965 494 aaPredicted RBP18.13■□□□□ 0.49
NPHP4-205ENST00000466897 HLA-DOAP06340 250 aa18.13■□□□□ 0.49
NPHP4-205ENST00000466897 TDO2P48775 406 aa18.13■□□□□ 0.49
NPHP4-205ENST00000466897 MAP3K10Q02779 954 aa18.13■□□□□ 0.49
NPHP4-205ENST00000466897 FSTL1Q12841 308 aa18.13■□□□□ 0.49
NPHP4-205ENST00000466897 SUPT20HL1Q3ZLR7 823 aa18.13■□□□□ 0.49
NPHP4-205ENST00000466897 CTR9Q6PD62 1173 aa18.13■□□□□ 0.49
NPHP4-205ENST00000466897 USP48Q86UV5 1035 aa18.13■□□□□ 0.49
NPHP4-205ENST00000466897 GLIS2Q9BZE0 524 aaPredicted RBP18.13■□□□□ 0.49
NPHP4-205ENST00000466897 LSG1Q9H089 658 aaKnown RBP18.13■□□□□ 0.49
NPHP4-205ENST00000466897 PI4KBQ9UBF8 816 aa18.13■□□□□ 0.49
NPHP4-205ENST00000466897 CTNNA3Q9UI47 895 aa18.13■□□□□ 0.49
NPHP4-205ENST00000466897 ATAD5Q96QE3 1844 aa18.13■□□□□ 0.49
NPHP4-205ENST00000466897 OTOFQ9HC10 1997 aa18.13■□□□□ 0.49
NPHP4-205ENST00000466897 USP17L12C9JPN9 530 aa18.12■□□□□ 0.49
NPHP4-205ENST00000466897 USP17L21D6R901 530 aa18.12■□□□□ 0.49
NPHP4-205ENST00000466897 TBC1D12O60347 775 aa18.12■□□□□ 0.49
NPHP4-205ENST00000466897 FGAP02671 866 aa18.12■□□□□ 0.49
NPHP4-205ENST00000466897 C12orf60Q5U649 245 aa18.12■□□□□ 0.49
NPHP4-205ENST00000466897 ZSCAN29Q8IWY8 852 aaPredicted RBP18.12■□□□□ 0.49
NPHP4-205ENST00000466897 CDCA5Q96FF9 252 aa18.12■□□□□ 0.49
NPHP4-205ENST00000466897 CSRNP1Q96S65 589 aa18.12■□□□□ 0.49
NPHP4-205ENST00000466897 ANO2Q9NQ90 1003 aa18.12■□□□□ 0.49
NPHP4-205ENST00000466897 ANAPC4Q9UJX5 808 aa18.12■□□□□ 0.49
NPHP4-205ENST00000466897 PALD1Q9ULE6 856 aa18.12■□□□□ 0.49
NPHP4-205ENST00000466897 U3KPZ7 1027 aaPredicted RBP18.12■□□□□ 0.49
NPHP4-205ENST00000466897 POLR3DP05423 398 aaPredicted RBP18.11■□□□□ 0.49
NPHP4-205ENST00000466897 PTH1RQ03431 593 aa18.11■□□□□ 0.49
NPHP4-205ENST00000466897 FOXP4Q8IVH2 680 aaPredicted RBP18.11■□□□□ 0.49
NPHP4-205ENST00000466897 SAP30BPQ9UHR5 308 aaKnown RBP18.11■□□□□ 0.49
NPHP4-205ENST00000466897 HERC5Q9UII4 1024 aaKnown RBP18.11■□□□□ 0.49
NPHP4-205ENST00000466897 SCAF8Q9UPN6 1271 aaKnown RBP18.11■□□□□ 0.49
NPHP4-205ENST00000466897 DOCK1Q14185 1865 aa18.1■□□□□ 0.49
NPHP4-205ENST00000466897 PASKQ96RG2 1323 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms