RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 ATP2B1P20020 1258 aa12.05□□□□□ -0.48
UFD1-206ENST00000466373 CMA1P23946 247 aa12.05□□□□□ -0.48
UFD1-206ENST00000466373 SYKP43405 635 aa12.05□□□□□ -0.48
UFD1-206ENST00000466373 ADGRA1Q86SQ6 560 aa12.05□□□□□ -0.48
UFD1-206ENST00000466373 TRMT1Q9NXH9 659 aaKnown RBP12.05□□□□□ -0.48
UFD1-206ENST00000466373 NUTM2BA6NNL0 878 aaPredicted RBP12.05□□□□□ -0.48
UFD1-206ENST00000466373 NUTM2EB1AL46 878 aaPredicted RBP12.05□□□□□ -0.48
UFD1-206ENST00000466373 BTBD18B2RXH4 712 aa12.05□□□□□ -0.48
UFD1-206ENST00000466373 KCNQ2O43526 872 aa12.05□□□□□ -0.48
UFD1-206ENST00000466373 CDC25BP30305 580 aa12.05□□□□□ -0.48
UFD1-206ENST00000466373 GYG1P46976 350 aa12.05□□□□□ -0.48
UFD1-206ENST00000466373 GLIPR1L2Q4G1C9 344 aa12.05□□□□□ -0.48
UFD1-206ENST00000466373 SHC4Q6S5L8 630 aa12.05□□□□□ -0.48
UFD1-206ENST00000466373 BICDL1Q6ZP65 573 aa12.05□□□□□ -0.48
UFD1-206ENST00000466373 NUTM2AQ8IVF1 878 aaPredicted RBP12.05□□□□□ -0.48
UFD1-206ENST00000466373 MARCH10Q8NA82 808 aaPredicted RBP12.05□□□□□ -0.48
UFD1-206ENST00000466373 BCL2L12Q9HB09 334 aa12.05□□□□□ -0.48
UFD1-206ENST00000466373 LMOD1P29536 600 aaPredicted RBP12.05□□□□□ -0.48
UFD1-206ENST00000466373 SSRP1Q08945 709 aaKnown RBP12.05□□□□□ -0.48
UFD1-206ENST00000466373 PNOCQ13519 176 aa12.05□□□□□ -0.48
UFD1-206ENST00000466373 SGMS1Q86VZ5 419 aa12.05□□□□□ -0.48
UFD1-206ENST00000466373 IFNKQ9P0W0 207 aa12.05□□□□□ -0.48
UFD1-206ENST00000466373 DDX60Q8IY21 1712 aaKnown RBP12.04□□□□□ -0.48
UFD1-206ENST00000466373 DOT1LQ8TEK3 1739 aa12.04□□□□□ -0.48
UFD1-206ENST00000466373 CYP7A1P22680 504 aa12.04□□□□□ -0.48
UFD1-206ENST00000466373 ALX1Q15699 326 aa12.04□□□□□ -0.48
UFD1-206ENST00000466373 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.04□□□□□ -0.48
UFD1-206ENST00000466373 NACAP1Q9BZK3 213 aa12.04□□□□□ -0.48
UFD1-206ENST00000466373 XPO4Q9C0E2 1151 aaKnown RBP12.04□□□□□ -0.48
UFD1-206ENST00000466373 RAI14Q9P0K7 980 aa12.04□□□□□ -0.48
UFD1-206ENST00000466373 NTSR2O95665 410 aa12.04□□□□□ -0.48
UFD1-206ENST00000466373 GTF2F1P35269 517 aaKnown RBP eCLIP12.04□□□□□ -0.48
UFD1-206ENST00000466373 PTPAQ15257 358 aa12.04□□□□□ -0.48
UFD1-206ENST00000466373 PTPN21Q16825 1174 aa12.04□□□□□ -0.48
UFD1-206ENST00000466373 C3orf67Q6ZVT6 689 aa12.04□□□□□ -0.48
UFD1-206ENST00000466373 NBPF11Q86T75 865 aa12.04□□□□□ -0.48
UFD1-206ENST00000466373 LIFRP42702 1097 aa12.03□□□□□ -0.48
UFD1-206ENST00000466373 WTAPQ15007 396 aa12.03□□□□□ -0.48
UFD1-206ENST00000466373 MAP3K14Q99558 947 aa12.03□□□□□ -0.48
UFD1-206ENST00000466373 MYH14Q7Z406 1995 aaKnown RBP12.03□□□□□ -0.48
UFD1-206ENST00000466373 RTN1Q16799 776 aa12.03□□□□□ -0.48
UFD1-206ENST00000466373 MAP7D2Q96T17 732 aa12.03□□□□□ -0.48
UFD1-206ENST00000466373 KRT23Q9C075 422 aa12.03□□□□□ -0.48
UFD1-206ENST00000466373 CYP2D7A0A087X1C5 515 aa12.02□□□□□ -0.48
UFD1-206ENST00000466373 hCG_1642624A0A1W2PR95 340 aa12.02□□□□□ -0.48
UFD1-206ENST00000466373 ATP1A3P13637 1013 aa12.02□□□□□ -0.48
UFD1-206ENST00000466373 NLRP12P59046 1061 aa12.02□□□□□ -0.48
UFD1-206ENST00000466373 NR5A1Q13285 461 aa12.02□□□□□ -0.48
UFD1-206ENST00000466373 LONRF3Q496Y0 759 aa12.02□□□□□ -0.48
UFD1-206ENST00000466373 HSP90AA4PQ58FG1 418 aa12.02□□□□□ -0.48
UFD1-206ENST00000466373 TMC6Q7Z403 805 aa12.02□□□□□ -0.48
UFD1-206ENST00000466373 AK7Q96M32 723 aa12.02□□□□□ -0.48
UFD1-206ENST00000466373 CNNM2Q9H8M5 875 aa12.02□□□□□ -0.48
UFD1-206ENST00000466373 COL4A1P02462 1669 aa12.02□□□□□ -0.48
UFD1-206ENST00000466373 ERICH2A1L162 156 aa12.02□□□□□ -0.49
UFD1-206ENST00000466373 PRDM1O75626 825 aa12.02□□□□□ -0.49
UFD1-206ENST00000466373 U2AF2P26368 475 aaKnown RBP eCLIP12.02□□□□□ -0.491e-14■■■■■ 41.4
UFD1-206ENST00000466373 GRIN1Q05586 938 aa12.02□□□□□ -0.49
UFD1-206ENST00000466373 SART3Q15020 963 aaKnown RBP12.02□□□□□ -0.49
UFD1-206ENST00000466373 DIS3L2Q8IYB7 885 aaKnown RBP12.02□□□□□ -0.49
UFD1-206ENST00000466373 JMYQ8N9B5 988 aa12.02□□□□□ -0.49
UFD1-206ENST00000466373 TAF1P21675 1872 aa12.02□□□□□ -0.49
UFD1-206ENST00000466373 COL14A1Q05707 1796 aaKnown RBP12.02□□□□□ -0.49
UFD1-206ENST00000466373 FOXN1O15353 648 aa12.02□□□□□ -0.49
UFD1-206ENST00000466373 FMNL1O95466 1100 aaPredicted RBP12.02□□□□□ -0.49
UFD1-206ENST00000466373 CCZ1BP86790 482 aa12.02□□□□□ -0.49
UFD1-206ENST00000466373 CCZ1P86791 482 aaPredicted RBP12.02□□□□□ -0.49
UFD1-206ENST00000466373 ERFEQ4G0M1 354 aa12.02□□□□□ -0.49
UFD1-206ENST00000466373 PARP10Q53GL7 1025 aa12.02□□□□□ -0.49
UFD1-206ENST00000466373 CCDC24Q8N4L8 307 aa12.02□□□□□ -0.49
UFD1-206ENST00000466373 DNAJC5Q9H3Z4 198 aa12.02□□□□□ -0.49
UFD1-206ENST00000466373 CHD4Q14839 1912 aa12.02□□□□□ -0.49
UFD1-206ENST00000466373 SPATA31A1Q5TZJ5 1347 aa12.01□□□□□ -0.49
UFD1-206ENST00000466373 PPARAQ07869 468 aa12.01□□□□□ -0.49
UFD1-206ENST00000466373 NAA30Q147X3 362 aaPredicted RBP12.01□□□□□ -0.49
UFD1-206ENST00000466373 NCAPHQ15003 741 aa12.01□□□□□ -0.49
UFD1-206ENST00000466373 NOSTRINQ8IVI9 506 aa12.01□□□□□ -0.49
UFD1-206ENST00000466373 TRIM22Q8IYM9 498 aa12.01□□□□□ -0.49
UFD1-206ENST00000466373 STAG1Q8WVM7 1258 aa12.01□□□□□ -0.49
UFD1-206ENST00000466373 UBAC1Q9BSL1 405 aa12.01□□□□□ -0.49
UFD1-206ENST00000466373 BAZ2BQ9UIF8 2168 aaKnown RBP12.01□□□□□ -0.49
UFD1-206ENST00000466373 PPP6R2O75170 966 aa12.01□□□□□ -0.49
UFD1-206ENST00000466373 IFNAR1P17181 557 aa12.01□□□□□ -0.49
UFD1-206ENST00000466373 TOB1P50616 345 aaPredicted RBP12.01□□□□□ -0.49
UFD1-206ENST00000466373 DYNLL1P63167 89 aaKnown RBP12.01□□□□□ -0.49
UFD1-206ENST00000466373 RBM6P78332 1123 aaKnown RBP12.01□□□□□ -0.49
UFD1-206ENST00000466373 SAFBQ15424 915 aaKnown RBP eCLIP12.01□□□□□ -0.49
UFD1-206ENST00000466373 CNNM3Q8NE01 707 aa12.01□□□□□ -0.49
UFD1-206ENST00000466373 OXER1Q8TDS5 423 aa12.01□□□□□ -0.49
UFD1-206ENST00000466373 KCNH3Q9ULD8 1083 aa12.01□□□□□ -0.49
UFD1-206ENST00000466373 HPSEQ9Y251 543 aa12.01□□□□□ -0.49
UFD1-206ENST00000466373 GTF2E1P29083 439 aaPredicted RBP12□□□□□ -0.49
UFD1-206ENST00000466373 FOXP4Q8IVH2 680 aaPredicted RBP12□□□□□ -0.49
UFD1-206ENST00000466373 ZNF654Q8IZM8 581 aa12□□□□□ -0.49
UFD1-206ENST00000466373 PDILTQ8N807 584 aa12□□□□□ -0.49
UFD1-206ENST00000466373 MAGEB6P1A0A0J9YX57 407 aa12□□□□□ -0.49
UFD1-206ENST00000466373 MMP1P03956 469 aa12□□□□□ -0.49
UFD1-206ENST00000466373 GNAT2P19087 354 aa12□□□□□ -0.49
UFD1-206ENST00000466373 RESP18Q5W5W9 173 aa12□□□□□ -0.49
UFD1-206ENST00000466373 CEP135Q66GS9 1140 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms