RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 CYP2D7A0A087X1C5 515 aa21.38■■□□□ 1.01
COL9A3-205ENST00000466192 IFIT3O14879 490 aaKnown RBP21.38■■□□□ 1.01
COL9A3-205ENST00000466192 SRGNP10124 158 aa21.38■■□□□ 1.01
COL9A3-205ENST00000466192 GRIK5Q16478 980 aa21.38■■□□□ 1.01
COL9A3-205ENST00000466192 TMED8Q6PL24 325 aaPredicted RBP21.38■■□□□ 1.01
COL9A3-205ENST00000466192 PPEF1O14829 653 aaPredicted RBP21.37■■□□□ 1.01
COL9A3-205ENST00000466192 LDHBP07195 334 aaKnown RBP21.37■■□□□ 1.01
COL9A3-205ENST00000466192 RXRAP19793 462 aa21.37■■□□□ 1.01
COL9A3-205ENST00000466192 LIFRP42702 1097 aa21.37■■□□□ 1.01
COL9A3-205ENST00000466192 GIMAP6Q6P9H5 292 aa21.37■■□□□ 1.01
COL9A3-205ENST00000466192 DUOX1Q9NRD9 1551 aa21.37■■□□□ 1.01
COL9A3-205ENST00000466192 MSL1Q68DK7 614 aa21.37■■□□□ 1.01
COL9A3-205ENST00000466192 SP8Q8IXZ3 490 aa21.37■■□□□ 1.01
COL9A3-205ENST00000466192 ECM29Q5VYK3 1845 aa21.37■■□□□ 1.01
COL9A3-205ENST00000466192 CPLX1O14810 134 aa21.36■■□□□ 1.01
COL9A3-205ENST00000466192 IL1R1P14778 569 aa21.36■■□□□ 1.01
COL9A3-205ENST00000466192 METAP2P50579 478 aaKnown RBP eCLIP21.36■■□□□ 1.01
COL9A3-205ENST00000466192 CTR9Q6PD62 1173 aa21.36■■□□□ 1.01
COL9A3-205ENST00000466192 NFXL1Q6ZNB6 911 aa21.36■■□□□ 1.01
COL9A3-205ENST00000466192 TMC4Q7Z404 712 aa21.36■■□□□ 1.01
COL9A3-205ENST00000466192 ZKSCAN3Q9BRR0 538 aa21.36■■□□□ 1.01
COL9A3-205ENST00000466192 CRNKL1Q9BZJ0 848 aaKnown RBP21.36■■□□□ 1.01
COL9A3-205ENST00000466192 ADD1P35611 737 aaKnown RBP21.36■■□□□ 1.01
COL9A3-205ENST00000466192 CCDC183Q5T5S1 534 aa21.36■■□□□ 1.01
COL9A3-205ENST00000466192 ZSCAN16Q9H4T2 348 aaPredicted RBP21.36■■□□□ 1.01
COL9A3-205ENST00000466192 DCP1AQ9NPI6 582 aaPredicted RBP21.36■■□□□ 1.01
COL9A3-205ENST00000466192 PARP3Q9Y6F1 533 aa21.36■■□□□ 1.01
COL9A3-205ENST00000466192 USP17L12C9JPN9 530 aa21.35■■□□□ 1.01
COL9A3-205ENST00000466192 USP17L21D6R901 530 aa21.35■■□□□ 1.01
COL9A3-205ENST00000466192 ZBTB43O43298 467 aa21.35■■□□□ 1.01
COL9A3-205ENST00000466192 MICU3Q86XE3 530 aa21.35■■□□□ 1.01
COL9A3-205ENST00000466192 FAM43AQ8N2R8 423 aa21.35■■□□□ 1.01
COL9A3-205ENST00000466192 SPATA32Q96LK8 384 aa21.35■■□□□ 1.01
COL9A3-205ENST00000466192 ATP6V0A2Q9Y487 856 aa21.35■■□□□ 1.01
COL9A3-205ENST00000466192 CDK5RAP2Q96SN8 1893 aa21.35■■□□□ 1.01
COL9A3-205ENST00000466192 NPR1P16066 1061 aa21.34■■□□□ 1.01
COL9A3-205ENST00000466192 CDC27P30260 824 aa21.34■■□□□ 1.01
COL9A3-205ENST00000466192 GUCY1B3Q02153 619 aa21.34■■□□□ 1.01
COL9A3-205ENST00000466192 MYL10Q9BUA6 226 aa21.34■■□□□ 1.01
COL9A3-205ENST00000466192 SCAND2PQ9GZW5 306 aaPredicted RBP21.34■■□□□ 1.01
COL9A3-205ENST00000466192 ORC3Q9UBD5 711 aaPredicted RBP21.34■■□□□ 1.01
COL9A3-205ENST00000466192 C6orf229H3BNL8 230 aa21.34■■□□□ 1.01
COL9A3-205ENST00000466192 IGSF3O75054 1194 aa21.34■■□□□ 1.01
COL9A3-205ENST00000466192 EVX2Q03828 476 aa21.34■■□□□ 1.01
COL9A3-205ENST00000466192 DIXDC1Q155Q3 683 aa21.34■■□□□ 1.01
COL9A3-205ENST00000466192 CCDC144CPQ8IYA2 1237 aa21.34■■□□□ 1.01
COL9A3-205ENST00000466192 ATP8A2Q9NTI2 1148 aa21.34■■□□□ 1.01
COL9A3-205ENST00000466192 ELP1O95163 1332 aa21.33■■□□□ 1.01
COL9A3-205ENST00000466192 ANP32BQ92688 251 aaKnown RBP21.33■■□□□ 1.01
COL9A3-205ENST00000466192 MTA3Q9BTC8 594 aa21.33■■□□□ 1.01
COL9A3-205ENST00000466192 FAM217BQ9NTX9 383 aaPredicted RBP21.33■■□□□ 1.01
COL9A3-205ENST00000466192 SLC12A7Q9Y666 1083 aa21.33■■□□□ 1.01
COL9A3-205ENST00000466192 CCDC69A6NI79 296 aa21.33■■□□□ 1
COL9A3-205ENST00000466192 PDE6BP35913 854 aa21.33■■□□□ 1
COL9A3-205ENST00000466192 SART3Q15020 963 aaKnown RBP21.33■■□□□ 1
COL9A3-205ENST00000466192 ESR2Q92731 530 aa21.33■■□□□ 1
COL9A3-205ENST00000466192 TSPY26PQ9H489 355 aa21.33■■□□□ 1
COL9A3-205ENST00000466192 FGRP09769 529 aa21.32■■□□□ 1
COL9A3-205ENST00000466192 WTAPQ15007 396 aa21.32■■□□□ 1
COL9A3-205ENST00000466192 EZH2Q15910 746 aaKnown RBP21.32■■□□□ 1
COL9A3-205ENST00000466192 OLFM4Q6UX06 510 aa21.32■■□□□ 1
COL9A3-205ENST00000466192 LEO1Q8WVC0 666 aaPredicted RBP21.32■■□□□ 1
COL9A3-205ENST00000466192 DLEC1Q9Y238 1755 aa21.32■■□□□ 1
COL9A3-205ENST00000466192 GOLGA8AA7E2F4 631 aa21.31■■□□□ 1
COL9A3-205ENST00000466192 NTRK3Q16288 839 aa21.31■■□□□ 1
COL9A3-205ENST00000466192 RNF214Q8ND24 703 aa21.31■■□□□ 1
COL9A3-205ENST00000466192 GSTO1P78417 241 aa21.31■■□□□ 1
COL9A3-205ENST00000466192 EN1Q05925 392 aaPredicted RBP21.31■■□□□ 1
COL9A3-205ENST00000466192 OTUD7BQ6GQQ9 843 aa21.31■■□□□ 1
COL9A3-205ENST00000466192 C8orf76Q96K31 380 aa21.31■■□□□ 1
COL9A3-205ENST00000466192 ERICH2A1L162 156 aa21.3■■□□□ 1
COL9A3-205ENST00000466192 PRDM1O75626 825 aa21.3■■□□□ 1
COL9A3-205ENST00000466192 ALDH1B1P30837 517 aa21.3■■□□□ 1
COL9A3-205ENST00000466192 CAMKK2Q96RR4 588 aa21.3■■□□□ 1
COL9A3-205ENST00000466192 UBAC1Q9BSL1 405 aa21.3■■□□□ 1
COL9A3-205ENST00000466192 GJB4Q9NTQ9 266 aa21.3■■□□□ 1
COL9A3-205ENST00000466192 NID2Q14112 1375 aa21.3■■□□□ 1
COL9A3-205ENST00000466192 NAV1Q8NEY1 1877 aa21.3■■□□□ 1
COL9A3-205ENST00000466192 CYP2D6P10635 497 aa21.3■■□□□ 1
COL9A3-205ENST00000466192 PCP11498 1178 aaKnown RBP21.3■■□□□ 1
COL9A3-205ENST00000466192 SEC23AQ15436 765 aa21.3■■□□□ 1
COL9A3-205ENST00000466192 ILDR1Q86SU0 546 aaPredicted RBP21.3■■□□□ 1
COL9A3-205ENST00000466192 FBXO18Q8NFZ0 1043 aa21.3■■□□□ 1
COL9A3-205ENST00000466192 SH3RF3Q8TEJ3 882 aaPredicted RBP21.3■■□□□ 1
COL9A3-205ENST00000466192 GOLGA6L4A6NEF3 574 aa21.29■■□□□ 1
COL9A3-205ENST00000466192 CDKL5O76039 1030 aa21.29■■□□□ 1
COL9A3-205ENST00000466192 SLC15A2Q16348 729 aa21.29■■□□□ 1
COL9A3-205ENST00000466192 SBK1Q52WX2 424 aa21.29■■□□□ 1
COL9A3-205ENST00000466192 PHKBQ93100 1093 aa21.29■■□□□ 1
COL9A3-205ENST00000466192 MASTLQ96GX5 879 aa21.29■■□□□ 1
COL9A3-205ENST00000466192 ARPP21Q9UBL0 812 aaPredicted RBP21.29■■□□□ 1
COL9A3-205ENST00000466192 MKRN1Q9UHC7 482 aaKnown RBP21.29■■□□□ 1
COL9A3-205ENST00000466192 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.29■■□□□ 1
COL9A3-205ENST00000466192 MROH7-TTC4A0A0A0MT08 1334 aa21.29■■□□□ 1
COL9A3-205ENST00000466192 TNKSO95271 1327 aa21.29■■□□□ 1
COL9A3-205ENST00000466192 QSER1Q2KHR3 1735 aa21.29■■□□□ 1
COL9A3-205ENST00000466192 RIMBP2O15034 1052 aa21.29■■□□□ 1
COL9A3-205ENST00000466192 RANBP6O60518 1105 aaKnown RBP21.29■■□□□ 1
COL9A3-205ENST00000466192 PPP4CP60510 307 aa21.29■■□□□ 1
COL9A3-205ENST00000466192 CEBPZQ03701 1054 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms