RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 TRIM42Q8IWZ5 723 aa6.92□□□□□ -1.3
USP9X-204ENST00000463829 RHOVQ96L33 236 aa6.92□□□□□ -1.3
USP9X-204ENST00000463829 RUSC1Q9BVN2 902 aa6.92□□□□□ -1.3
USP9X-204ENST00000463829 MIR1-1HGQ9H1L0 117 aa6.92□□□□□ -1.3
USP9X-204ENST00000463829 CCDC86Q9H6F5 360 aaKnown RBP6.92□□□□□ -1.3
USP9X-204ENST00000463829 PCDHGB7Q9Y5F8 929 aa6.92□□□□□ -1.3
USP9X-204ENST00000463829 COL17A1Q9UMD9 1497 aaPredicted RBP6.92□□□□□ -1.3
USP9X-204ENST00000463829 WISP1O95388 367 aa6.91□□□□□ -1.3
USP9X-204ENST00000463829 DLGAP3O95886 979 aa6.91□□□□□ -1.3
USP9X-204ENST00000463829 TXKP42681 527 aa6.91□□□□□ -1.3
USP9X-204ENST00000463829 RAD51AP2Q09MP3 1159 aa6.91□□□□□ -1.3
USP9X-204ENST00000463829 NFIAQ12857 509 aa6.91□□□□□ -1.3
USP9X-204ENST00000463829 KRTAP1-3Q8IUG1 177 aa6.91□□□□□ -1.3
USP9X-204ENST00000463829 ACSBG1Q96GR2 724 aa6.91□□□□□ -1.3
USP9X-204ENST00000463829 RNF208Q9H0X6 261 aa6.91□□□□□ -1.3
USP9X-204ENST00000463829 RAD18Q9NS91 495 aa6.91□□□□□ -1.3
USP9X-204ENST00000463829 CACNA2D2Q9NY47 1150 aa6.91□□□□□ -1.3
USP9X-204ENST00000463829 PCDHB5Q9Y5E4 795 aa6.91□□□□□ -1.3
USP9X-204ENST00000463829 SLFN14P0C7P3 912 aa6.9□□□□□ -1.3
USP9X-204ENST00000463829 LIG1P18858 919 aa6.9□□□□□ -1.3
USP9X-204ENST00000463829 NUTM2GQ5VZR2 741 aa6.9□□□□□ -1.3
USP9X-204ENST00000463829 RNF43Q68DV7 783 aa6.9□□□□□ -1.3
USP9X-204ENST00000463829 MPRIPQ6WCQ1 1025 aa6.9□□□□□ -1.3
USP9X-204ENST00000463829 CLEC10AQ8IUN9 316 aa6.9□□□□□ -1.3
USP9X-204ENST00000463829 ARMC10Q8N2F6 343 aa6.9□□□□□ -1.3
USP9X-204ENST00000463829 GPBAR1Q8TDU6 330 aa6.9□□□□□ -1.3
USP9X-204ENST00000463829 ZNF296Q8WUU4 475 aaPredicted RBP6.9□□□□□ -1.3
USP9X-204ENST00000463829 SPON2Q9BUD6 331 aa6.9□□□□□ -1.3
USP9X-204ENST00000463829 TMPRSS13Q9BYE2 586 aa6.9□□□□□ -1.3
USP9X-204ENST00000463829 CCSER2Q9H7U1 834 aa6.9□□□□□ -1.3
USP9X-204ENST00000463829 GOLGA2P5Q9HBQ8 144 aa6.9□□□□□ -1.3
USP9X-204ENST00000463829 CYP4F12Q9HCS2 524 aa6.9□□□□□ -1.3
USP9X-204ENST00000463829 ADAMTS1Q9UHI8 967 aa6.9□□□□□ -1.3
USP9X-204ENST00000463829 ZNF862O60290 1169 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 AOC2O75106 756 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 TGFB1P01137 390 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 FAM160A1Q05DH4 1040 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 SEPT6Q14141 434 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 KIF4BQ2VIQ3 1234 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 SNAP47Q5SQN1 464 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 LCE3BQ5TA77 95 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 FBXL19Q6PCT2 694 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 KIAA0825Q8IV33 1275 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 GOLM1Q8NBJ4 401 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 JARID2Q92833 1246 aaPredicted RBP6.89□□□□□ -1.31
USP9X-204ENST00000463829 FAM46AQ96IP4 442 aaKnown RBP6.89□□□□□ -1.31
USP9X-204ENST00000463829 MYRFLQ96LU7 910 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 DBNDD2Q9BQY9 259 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 KCNF1Q9H3M0 494 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 C7orf69Q9H7B7 122 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 SUGCTQ9HAC7 445 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 KCNQ5Q9NR82 932 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 SUPT16HQ9Y5B9 1047 aaKnown RBP6.89□□□□□ -1.31
USP9X-204ENST00000463829 SYNGAP1Q96PV0 1343 aa6.89□□□□□ -1.31
USP9X-204ENST00000463829 GREM1O60565 184 aa6.88□□□□□ -1.31
USP9X-204ENST00000463829 PTPN11Q06124 597 aaPredicted RBP6.88□□□□□ -1.31
USP9X-204ENST00000463829 ANKRD34AQ69YU3 496 aa6.88□□□□□ -1.31
USP9X-204ENST00000463829 SMG8Q8ND04 991 aaKnown RBP6.88□□□□□ -1.31
USP9X-204ENST00000463829 GAL3ST3Q96A11 431 aa6.88□□□□□ -1.31
USP9X-204ENST00000463829 WDR89Q96FK6 387 aaPredicted RBP6.88□□□□□ -1.31
USP9X-204ENST00000463829 KRTAP4-12Q9BQ66 201 aa6.88□□□□□ -1.31
USP9X-204ENST00000463829 WDR18Q9BV38 432 aa6.88□□□□□ -1.31
USP9X-204ENST00000463829 ACBD3Q9H3P7 528 aa6.88□□□□□ -1.31
USP9X-204ENST00000463829 PCDHA4Q9UN74 947 aa6.88□□□□□ -1.31
USP9X-204ENST00000463829 ROBO2Q9HCK4 1378 aa6.87□□□□□ -1.31
USP9X-204ENST00000463829 HMX2A2RU54 273 aa6.87□□□□□ -1.31
USP9X-204ENST00000463829 KIAA1324LA8MWY0 1029 aaPredicted RBP6.87□□□□□ -1.31
USP9X-204ENST00000463829 F13A1P00488 732 aa6.87□□□□□ -1.31
USP9X-204ENST00000463829 GARTP22102 1010 aa6.87□□□□□ -1.31
USP9X-204ENST00000463829 GP2P55259 537 aaKnown RBP6.87□□□□□ -1.31
USP9X-204ENST00000463829 AKAP4Q5JQC9 854 aa6.87□□□□□ -1.31
USP9X-204ENST00000463829 FDX2Q6P4F2 183 aa6.87□□□□□ -1.31
USP9X-204ENST00000463829 BNC2Q6ZN30 1099 aaPredicted RBP6.87□□□□□ -1.31
USP9X-204ENST00000463829 ZDHHC13Q8IUH4 622 aa6.87□□□□□ -1.31
USP9X-204ENST00000463829 FAM20CQ8IXL6 584 aa6.87□□□□□ -1.31
USP9X-204ENST00000463829 C12orf50Q8NA57 414 aaPredicted RBP6.87□□□□□ -1.31
USP9X-204ENST00000463829 GIMAP7Q8NHV1 300 aa6.87□□□□□ -1.31
USP9X-204ENST00000463829 GATAD2BQ8WXI9 593 aa6.87□□□□□ -1.31
USP9X-204ENST00000463829 FAM83CQ9BQN1 747 aa6.87□□□□□ -1.31
USP9X-204ENST00000463829 NT5C1AQ9BXI3 368 aa6.87□□□□□ -1.31
USP9X-204ENST00000463829 FAM221AA4D161 298 aa6.86□□□□□ -1.31
USP9X-204ENST00000463829 MED26O95402 600 aa6.86□□□□□ -1.31
USP9X-204ENST00000463829 BPNT1O95861 308 aa6.86□□□□□ -1.31
USP9X-204ENST00000463829 BMP3P12645 472 aa6.86□□□□□ -1.31
USP9X-204ENST00000463829 ZC3H6P61129 1189 aaKnown RBP6.86□□□□□ -1.31
USP9X-204ENST00000463829 SOX4Q06945 474 aaPredicted RBP6.86□□□□□ -1.31
USP9X-204ENST00000463829 GNL2Q13823 731 aaKnown RBP6.86□□□□□ -1.31
USP9X-204ENST00000463829 FAM196AQ6ZSG2 479 aa6.86□□□□□ -1.31
USP9X-204ENST00000463829 BEND4Q6ZU67 534 aa6.86□□□□□ -1.31
USP9X-204ENST00000463829 INPP5FQ9Y2H2 1132 aa6.86□□□□□ -1.31
USP9X-204ENST00000463829 HIF3AQ9Y2N7 669 aa6.86□□□□□ -1.31
USP9X-204ENST00000463829 BTBD11A6QL63 1104 aa6.85□□□□□ -1.31
USP9X-204ENST00000463829 GAS2O43903 313 aaKnown RBP6.85□□□□□ -1.31
USP9X-204ENST00000463829 CILPO75339 1184 aa6.85□□□□□ -1.31
USP9X-204ENST00000463829 ID3Q02535 119 aa6.85□□□□□ -1.31
USP9X-204ENST00000463829 RPL6Q02878 288 aaKnown RBP6.85□□□□□ -1.31
USP9X-204ENST00000463829 PAK2Q13177 524 aa6.85□□□□□ -1.31
USP9X-204ENST00000463829 ZC3H12AQ5D1E8 599 aaKnown RBP6.85□□□□□ -1.31
USP9X-204ENST00000463829 HDXQ7Z353 690 aa6.85□□□□□ -1.31
USP9X-204ENST00000463829 SPATA32Q96LK8 384 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms