RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 AK9Q5TCS8 1911 aa23.83■■□□□ 1.41
COL9A3-204ENST00000463487 SAPCD2Q86UD0 394 aa23.83■■□□□ 1.41
COL9A3-204ENST00000463487 TEPSINQ96N21 525 aa23.83■■□□□ 1.41
COL9A3-204ENST00000463487 RIOK1Q9BRS2 568 aaKnown RBP23.83■■□□□ 1.41
COL9A3-204ENST00000463487 OSBPL5Q9H0X9 879 aaPredicted RBP23.83■■□□□ 1.41
COL9A3-204ENST00000463487 DHX36Q9H2U1 1008 aaKnown RBP23.83■■□□□ 1.41
COL9A3-204ENST00000463487 MBD4O95243 580 aa23.82■■□□□ 1.4
COL9A3-204ENST00000463487 IREB2P48200 963 aaKnown RBP23.82■■□□□ 1.4
COL9A3-204ENST00000463487 HUNKP57058 714 aa23.82■■□□□ 1.4
COL9A3-204ENST00000463487 HHIPL1Q96JK4 782 aa23.82■■□□□ 1.4
COL9A3-204ENST00000463487 CSRNP1Q96S65 589 aa23.82■■□□□ 1.4
COL9A3-204ENST00000463487 DDX4Q9NQI0 724 aaKnown RBP23.82■■□□□ 1.4
COL9A3-204ENST00000463487 FLT1P17948 1338 aa23.82■■□□□ 1.4
COL9A3-204ENST00000463487 HIP1O00291 1037 aa23.81■■□□□ 1.4
COL9A3-204ENST00000463487 TTC22Q5TAA0 569 aa23.81■■□□□ 1.4
COL9A3-204ENST00000463487 MAPKAPK5Q8IW41 473 aa23.81■■□□□ 1.4
COL9A3-204ENST00000463487 ANGEL1Q9UNK9 670 aaKnown RBP23.81■■□□□ 1.4
COL9A3-204ENST00000463487 UNCXA6NJT0 531 aa23.8■■□□□ 1.4
COL9A3-204ENST00000463487 PRKG1Q13976 671 aa23.8■■□□□ 1.4
COL9A3-204ENST00000463487 PAXIP1Q6ZW49 1069 aaPredicted RBP23.8■■□□□ 1.4
COL9A3-204ENST00000463487 LCORLQ8N3X6 602 aa23.8■■□□□ 1.4
COL9A3-204ENST00000463487 ARMT1Q9H993 441 aa23.8■■□□□ 1.4
COL9A3-204ENST00000463487 ATRNL1Q5VV63 1379 aa23.79■■□□□ 1.4
COL9A3-204ENST00000463487 RASSF10A6NK89 507 aa23.79■■□□□ 1.4
COL9A3-204ENST00000463487 HLA-DOAP06340 250 aa23.79■■□□□ 1.4
COL9A3-204ENST00000463487 GNAT2P19087 354 aa23.79■■□□□ 1.4
COL9A3-204ENST00000463487 DEFB115Q30KQ5 88 aa23.79■■□□□ 1.4
COL9A3-204ENST00000463487 AMOTL1Q8IY63 956 aa23.79■■□□□ 1.4
COL9A3-204ENST00000463487 FOCADQ5VW36 1801 aa23.79■■□□□ 1.4
COL9A3-204ENST00000463487 SSC5DA1L4H1 1573 aa23.78■■□□□ 1.4
COL9A3-204ENST00000463487 ECE1P42892 770 aa23.78■■□□□ 1.4
COL9A3-204ENST00000463487 MAP3K11Q16584 847 aa23.78■■□□□ 1.4
COL9A3-204ENST00000463487 ZMYM1Q5SVZ6 1142 aa23.78■■□□□ 1.4
COL9A3-204ENST00000463487 TRIM34Q9BYJ4 488 aa23.78■■□□□ 1.4
COL9A3-204ENST00000463487 ZNF341Q9BYN7 854 aa23.78■■□□□ 1.4
COL9A3-204ENST00000463487 PUS7LQ9H0K6 701 aaKnown RBP23.78■■□□□ 1.4
COL9A3-204ENST00000463487 ATP8A2Q9NTI2 1148 aa23.78■■□□□ 1.4
COL9A3-204ENST00000463487 PI4KBQ9UBF8 816 aa23.78■■□□□ 1.4
COL9A3-204ENST00000463487 SLFNL1Q499Z3 407 aa23.77■■□□□ 1.4
COL9A3-204ENST00000463487 CDAN1Q8IWY9 1227 aa23.77■■□□□ 1.4
COL9A3-204ENST00000463487 ZFPM1Q8IX07 1006 aa23.77■■□□□ 1.4
COL9A3-204ENST00000463487 OSBP2Q969R2 916 aa23.77■■□□□ 1.4
COL9A3-204ENST00000463487 DIAPH3Q9NSV4 1193 aa23.77■■□□□ 1.4
COL9A3-204ENST00000463487 SLC4A4Q9Y6R1 1079 aa23.77■■□□□ 1.4
COL9A3-204ENST00000463487 CDK5RAP2Q96SN8 1893 aa23.77■■□□□ 1.4
COL9A3-204ENST00000463487 DDTLA6NHG4 134 aaPredicted RBP23.76■■□□□ 1.39
COL9A3-204ENST00000463487 GPAA1O43292 621 aa23.76■■□□□ 1.39
COL9A3-204ENST00000463487 MFAP1P55081 439 aaKnown RBP23.76■■□□□ 1.39
COL9A3-204ENST00000463487 HTRA3P83110 453 aa23.76■■□□□ 1.39
COL9A3-204ENST00000463487 TTC6Q86TZ1 520 aa23.76■■□□□ 1.39
COL9A3-204ENST00000463487 ANKRD13AQ8IZ07 590 aa23.76■■□□□ 1.39
COL9A3-204ENST00000463487 HELLSQ9NRZ9 838 aa23.76■■□□□ 1.39
COL9A3-204ENST00000463487 UBE2Q2LH0YL09 131 aa23.75■■□□□ 1.39
COL9A3-204ENST00000463487 CHGBP05060 677 aa23.75■■□□□ 1.39
COL9A3-204ENST00000463487 ZNF157P51786 506 aaPredicted RBP23.75■■□□□ 1.39
COL9A3-204ENST00000463487 RGMBQ6NW40 437 aa23.75■■□□□ 1.39
COL9A3-204ENST00000463487 CCDC102AQ96A19 550 aa23.75■■□□□ 1.39
COL9A3-204ENST00000463487 STRBPQ96SI9 672 aaKnown RBP23.75■■□□□ 1.39
COL9A3-204ENST00000463487 MKRN1Q9UHC7 482 aaKnown RBP23.75■■□□□ 1.39
COL9A3-204ENST00000463487 HERC5Q9UII4 1024 aaKnown RBP23.75■■□□□ 1.39
COL9A3-204ENST00000463487 CSADQ9Y600 493 aa23.75■■□□□ 1.39
COL9A3-204ENST00000463487 USP2O75604 605 aaPredicted RBP23.74■■□□□ 1.39
COL9A3-204ENST00000463487 POLR3DP05423 398 aaPredicted RBP23.74■■□□□ 1.39
COL9A3-204ENST00000463487 SDSP20132 328 aa23.74■■□□□ 1.39
COL9A3-204ENST00000463487 MOB2Q70IA6 237 aa23.74■■□□□ 1.39
COL9A3-204ENST00000463487 MIGA2Q7L4E1 593 aa23.74■■□□□ 1.39
COL9A3-204ENST00000463487 SH3BP5LQ7L8J4 393 aa23.74■■□□□ 1.39
COL9A3-204ENST00000463487 CRACR2BQ8N4Y2 399 aaPredicted RBP23.74■■□□□ 1.39
COL9A3-204ENST00000463487 SDR42E1Q8WUS8 393 aa23.74■■□□□ 1.39
COL9A3-204ENST00000463487 WRNIP1Q96S55 665 aa23.74■■□□□ 1.39
COL9A3-204ENST00000463487 NACAP1Q9BZK3 213 aa23.74■■□□□ 1.39
COL9A3-204ENST00000463487 MCM9Q9NXL9 1143 aa23.74■■□□□ 1.39
COL9A3-204ENST00000463487 SAP30BPQ9UHR5 308 aaKnown RBP23.74■■□□□ 1.39
COL9A3-204ENST00000463487 PALD1Q9ULE6 856 aa23.74■■□□□ 1.39
COL9A3-204ENST00000463487 NAV1Q8NEY1 1877 aa23.73■■□□□ 1.39
COL9A3-204ENST00000463487 TBC1D12O60347 775 aa23.73■■□□□ 1.39
COL9A3-204ENST00000463487 GSPT1P15170 499 aaKnown RBP23.73■■□□□ 1.39
COL9A3-204ENST00000463487 MCMDC2Q4G0Z9 681 aa23.73■■□□□ 1.39
COL9A3-204ENST00000463487 LDLRAD1Q5T700 205 aa23.73■■□□□ 1.39
COL9A3-204ENST00000463487 GIMAP6Q6P9H5 292 aa23.73■■□□□ 1.39
COL9A3-204ENST00000463487 FOXP4Q8IVH2 680 aaPredicted RBP23.73■■□□□ 1.39
COL9A3-204ENST00000463487 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.73■■□□□ 1.39
COL9A3-204ENST00000463487 DCP1AQ9NPI6 582 aaPredicted RBP23.73■■□□□ 1.39
COL9A3-204ENST00000463487 MYH1P12882 1939 aa23.72■■□□□ 1.39
COL9A3-204ENST00000463487 M0R2C6 588 aa23.72■■□□□ 1.39
COL9A3-204ENST00000463487 APPP05067 770 aa23.72■■□□□ 1.39
COL9A3-204ENST00000463487 MAP3K9P80192 1104 aa23.72■■□□□ 1.39
COL9A3-204ENST00000463487 KLRG1Q96E93 195 aa23.72■■□□□ 1.39
COL9A3-204ENST00000463487 TAOK2Q9UL54 1235 aa23.72■■□□□ 1.39
COL9A3-204ENST00000463487 GRM1Q13255 1194 aa23.71■■□□□ 1.39
COL9A3-204ENST00000463487 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.71■■□□□ 1.393e-8■■■■□ 19.8
COL9A3-204ENST00000463487 SLC10A4Q96EP9 437 aa23.71■■□□□ 1.39
COL9A3-204ENST00000463487 CAPNS2Q96L46 248 aa23.71■■□□□ 1.39
COL9A3-204ENST00000463487 ARPP21Q9UBL0 812 aaPredicted RBP23.71■■□□□ 1.39
COL9A3-204ENST00000463487 FZD1Q9UP38 647 aa23.71■■□□□ 1.39
COL9A3-204ENST00000463487 PRKAB2O43741 272 aa23.7■■□□□ 1.38
COL9A3-204ENST00000463487 MAP3K10Q02779 954 aa23.7■■□□□ 1.38
COL9A3-204ENST00000463487 NMIQ13287 307 aaPredicted RBP23.7■■□□□ 1.38
COL9A3-204ENST00000463487 RUFY2Q8WXA3 655 aa23.7■■□□□ 1.38
COL9A3-204ENST00000463487 SEC62Q99442 399 aaKnown RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms