RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 OTUD7BQ6GQQ9 843 aa19.8■□□□□ 0.76
COL1A1-202ENST00000463440 IFNL1Q8IU54 200 aa19.8■□□□□ 0.76
COL1A1-202ENST00000463440 ZKSCAN4Q969J2 545 aaPredicted RBP19.8■□□□□ 0.76
COL1A1-202ENST00000463440 DDX4Q9NQI0 724 aaKnown RBP19.8■□□□□ 0.76
COL1A1-202ENST00000463440 SNCAIPQ9Y6H5 919 aa19.8■□□□□ 0.76
COL1A1-202ENST00000463440 SPDYE5A6NIY4 337 aa19.79■□□□□ 0.76
COL1A1-202ENST00000463440 IDH1O75874 414 aaKnown RBP19.79■□□□□ 0.76
COL1A1-202ENST00000463440 TBC1D8O95759 1140 aa19.79■□□□□ 0.76
COL1A1-202ENST00000463440 ERO1BQ86YB8 467 aa19.79■□□□□ 0.76
COL1A1-202ENST00000463440 TEX11Q8IYF3 940 aa19.79■□□□□ 0.76
COL1A1-202ENST00000463440 OTUD5Q96G74 571 aa19.79■□□□□ 0.76
COL1A1-202ENST00000463440 LRRCC1Q9C099 1032 aa19.79■□□□□ 0.76
COL1A1-202ENST00000463440 ZNF112Q9UJU3 913 aa19.79■□□□□ 0.76
COL1A1-202ENST00000463440 LAMB1P07942 1786 aa19.78■□□□□ 0.76
COL1A1-202ENST00000463440 GTF2A2P52657 109 aa19.78■□□□□ 0.76
COL1A1-202ENST00000463440 MAP3K12Q12852 859 aa19.78■□□□□ 0.76
COL1A1-202ENST00000463440 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.78■□□□□ 0.76
COL1A1-202ENST00000463440 CNKSR2Q8WXI2 1034 aa19.78■□□□□ 0.76
COL1A1-202ENST00000463440 AATFQ9NY61 560 aaKnown RBP eCLIP19.78■□□□□ 0.76
COL1A1-202ENST00000463440 NDUFB9Q9Y6M9 179 aa19.78■□□□□ 0.76
COL1A1-202ENST00000463440 DOCK2Q92608 1830 aa19.77■□□□□ 0.76
COL1A1-202ENST00000463440 DDTLA6NHG4 134 aaPredicted RBP19.77■□□□□ 0.76
COL1A1-202ENST00000463440 CYP7A1P22680 504 aa19.77■□□□□ 0.76
COL1A1-202ENST00000463440 INPP5BP32019 993 aa19.77■□□□□ 0.76
COL1A1-202ENST00000463440 PPP4CP60510 307 aa19.77■□□□□ 0.76
COL1A1-202ENST00000463440 TTF1Q15361 905 aaPredicted RBP19.77■□□□□ 0.76
COL1A1-202ENST00000463440 TMED8Q6PL24 325 aaPredicted RBP19.77■□□□□ 0.76
COL1A1-202ENST00000463440 SH3BP5LQ7L8J4 393 aa19.77■□□□□ 0.76
COL1A1-202ENST00000463440 SH3RF3Q8TEJ3 882 aaPredicted RBP19.77■□□□□ 0.76
COL1A1-202ENST00000463440 CFHR5Q9BXR6 569 aa19.77■□□□□ 0.76
COL1A1-202ENST00000463440 MYO5AQ9Y4I1 1855 aaKnown RBP19.77■□□□□ 0.76
COL1A1-202ENST00000463440 ATRNL1Q5VV63 1379 aa19.76■□□□□ 0.75
COL1A1-202ENST00000463440 TESPA1A2RU30 521 aaPredicted RBP19.76■□□□□ 0.75
COL1A1-202ENST00000463440 IGF2BP3O00425 579 aaKnown RBP eCLIP19.76■□□□□ 0.75
COL1A1-202ENST00000463440 MS4A4AQ96JQ5 239 aa19.76■□□□□ 0.75
COL1A1-202ENST00000463440 ANTXR1Q9H6X2 564 aa19.76■□□□□ 0.75
COL1A1-202ENST00000463440 CCL15-CCL14A0A0B4J2E2 113 aa19.75■□□□□ 0.75
COL1A1-202ENST00000463440 MAP3K10Q02779 954 aa19.75■□□□□ 0.75
COL1A1-202ENST00000463440 PPATQ06203 517 aa19.75■□□□□ 0.75
COL1A1-202ENST00000463440 PPIL2Q13356 520 aa19.75■□□□□ 0.75
COL1A1-202ENST00000463440 CCL15Q16663 113 aa19.75■□□□□ 0.75
COL1A1-202ENST00000463440 NOM1Q5C9Z4 860 aaKnown RBP19.75■□□□□ 0.75
COL1A1-202ENST00000463440 NOL9Q5SY16 702 aaKnown RBP19.75■□□□□ 0.75
COL1A1-202ENST00000463440 ADGRA1Q86SQ6 560 aa19.75■□□□□ 0.75
COL1A1-202ENST00000463440 CERS3Q8IU89 383 aa19.75■□□□□ 0.75
COL1A1-202ENST00000463440 MAGEB6Q8N7X4 407 aa19.75■□□□□ 0.75
COL1A1-202ENST00000463440 OSBPL5Q9H0X9 879 aaPredicted RBP19.75■□□□□ 0.75
COL1A1-202ENST00000463440 DCTPP1Q9H773 170 aa19.75■□□□□ 0.75
COL1A1-202ENST00000463440 COL2A1P02458 1487 aaPredicted RBP19.74■□□□□ 0.75
COL1A1-202ENST00000463440 GPR25O00155 361 aa19.74■□□□□ 0.75
COL1A1-202ENST00000463440 CETPP11597 493 aa19.74■□□□□ 0.75
COL1A1-202ENST00000463440 SNAPC2Q13487 334 aa19.74■□□□□ 0.75
COL1A1-202ENST00000463440 DGKZQ13574 1117 aa19.74■□□□□ 0.75
COL1A1-202ENST00000463440 DNAJC2Q99543 621 aaKnown RBP19.74■□□□□ 0.75
COL1A1-202ENST00000463440 PHF20L1A8MW92 1017 aa19.73■□□□□ 0.75
COL1A1-202ENST00000463440 IRF6O14896 467 aa19.73■□□□□ 0.75
COL1A1-202ENST00000463440 TBC1D12O60347 775 aa19.73■□□□□ 0.75
COL1A1-202ENST00000463440 CAPN15O75808 1086 aa19.73■□□□□ 0.75
COL1A1-202ENST00000463440 TGFBRAP1Q8WUH2 860 aa19.73■□□□□ 0.75
COL1A1-202ENST00000463440 ZNF296Q8WUU4 475 aaPredicted RBP19.73■□□□□ 0.75
COL1A1-202ENST00000463440 BRI3BPQ8WY22 251 aa19.73■□□□□ 0.75
COL1A1-202ENST00000463440 PTPN18Q99952 460 aa19.73■□□□□ 0.75
COL1A1-202ENST00000463440 GOLIM4O00461 696 aa19.72■□□□□ 0.75
COL1A1-202ENST00000463440 SMARCA5O60264 1052 aaPredicted RBP19.72■□□□□ 0.75
COL1A1-202ENST00000463440 ATP5JP18859 108 aa19.72■□□□□ 0.75
COL1A1-202ENST00000463440 SCYL3Q8IZE3 742 aa19.72■□□□□ 0.75
COL1A1-202ENST00000463440 CRBNQ96SW2 442 aa19.72■□□□□ 0.75
COL1A1-202ENST00000463440 MCOLN1Q9GZU1 580 aa19.72■□□□□ 0.75
COL1A1-202ENST00000463440 DHX36Q9H2U1 1008 aaKnown RBP19.72■□□□□ 0.75
COL1A1-202ENST00000463440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.72■□□□□ 0.75
COL1A1-202ENST00000463440 PICK1Q9NRD5 415 aa19.72■□□□□ 0.75
COL1A1-202ENST00000463440 PCDHB15Q9Y5E8 787 aa19.72■□□□□ 0.75
COL1A1-202ENST00000463440 CTNND1O60716 968 aaKnown RBP19.71■□□□□ 0.75
COL1A1-202ENST00000463440 DYNLL1P63167 89 aaKnown RBP19.71■□□□□ 0.75
COL1A1-202ENST00000463440 MAPKAPK5Q8IW41 473 aa19.71■□□□□ 0.75
COL1A1-202ENST00000463440 MIGA1Q8NAN2 632 aa19.71■□□□□ 0.75
COL1A1-202ENST00000463440 ABHD8Q96I13 439 aa19.71■□□□□ 0.75
COL1A1-202ENST00000463440 BOLA2Q9H3K6 86 aa19.71■□□□□ 0.75
COL1A1-202ENST00000463440 R3HDMLQ9H3Y0 253 aa19.71■□□□□ 0.75
COL1A1-202ENST00000463440 PAG1Q9NWQ8 432 aa19.71■□□□□ 0.75
COL1A1-202ENST00000463440 FLT1P17948 1338 aa19.71■□□□□ 0.75
COL1A1-202ENST00000463440 FKTNO75072 461 aa19.7■□□□□ 0.74
COL1A1-202ENST00000463440 CRHR2Q13324 411 aa19.7■□□□□ 0.74
COL1A1-202ENST00000463440 SLC9C2Q5TAH2 1124 aa19.7■□□□□ 0.74
COL1A1-202ENST00000463440 CTU1Q7Z7A3 348 aaKnown RBP19.7■□□□□ 0.74
COL1A1-202ENST00000463440 PI4KBQ9UBF8 816 aa19.7■□□□□ 0.74
COL1A1-202ENST00000463440 HERC5Q9UII4 1024 aaKnown RBP19.7■□□□□ 0.74
COL1A1-202ENST00000463440 SLURP2P0DP57 97 aa19.69■□□□□ 0.74
COL1A1-202ENST00000463440 PDE6AP16499 860 aa19.69■□□□□ 0.74
COL1A1-202ENST00000463440 GPATCH3Q96I76 525 aa19.69■□□□□ 0.74
COL1A1-202ENST00000463440 HAUS7Q99871 368 aa19.69■□□□□ 0.74
COL1A1-202ENST00000463440 ZCCHC17Q9NP64 241 aaKnown RBP19.69■□□□□ 0.74
COL1A1-202ENST00000463440 KCNH4Q9UQ05 1017 aa19.69■□□□□ 0.74
COL1A1-202ENST00000463440 PTPRAP18433 802 aa19.68■□□□□ 0.74
COL1A1-202ENST00000463440 USP5P45974 858 aa19.68■□□□□ 0.74
COL1A1-202ENST00000463440 TAF1CQ15572 869 aaPredicted RBP19.68■□□□□ 0.74
COL1A1-202ENST00000463440 FAM43AQ8N2R8 423 aa19.68■□□□□ 0.74
COL1A1-202ENST00000463440 ZFYVE28Q9HCC9 887 aa19.68■□□□□ 0.74
COL1A1-202ENST00000463440 ECHDC1Q9NTX5 307 aa19.68■□□□□ 0.74
COL1A1-202ENST00000463440 FOCADQ5VW36 1801 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms