RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 CCDC183Q5T5S1 534 aa14.99□□□□□ -0.01
VAPB-203ENST00000463370 OLFM4Q6UX06 510 aa14.99□□□□□ -0.01
VAPB-203ENST00000463370 DCP1AQ9NPI6 582 aaPredicted RBP14.99□□□□□ -0.01
VAPB-203ENST00000463370 GOLGA8AA7E2F4 631 aa14.98□□□□□ -0.01
VAPB-203ENST00000463370 CYP2D6P10635 497 aa14.98□□□□□ -0.01
VAPB-203ENST00000463370 SLC4A8Q2Y0W8 1093 aa14.98□□□□□ -0.01
VAPB-203ENST00000463370 DZIP1Q86YF9 867 aaKnown RBP14.98□□□□□ -0.01
VAPB-203ENST00000463370 SLC12A7Q9Y666 1083 aa14.98□□□□□ -0.01
VAPB-203ENST00000463370 RNF214Q8ND24 703 aa14.98□□□□□ -0.01
VAPB-203ENST00000463370 FBXO18Q8NFZ0 1043 aa14.98□□□□□ -0.01
VAPB-203ENST00000463370 C8orf76Q96K31 380 aa14.98□□□□□ -0.01
VAPB-203ENST00000463370 USP28Q96RU2 1077 aa14.98□□□□□ -0.01
VAPB-203ENST00000463370 GGA1Q9UJY5 639 aa14.98□□□□□ -0.01
VAPB-203ENST00000463370 CCDC69A6NI79 296 aa14.97□□□□□ -0.01
VAPB-203ENST00000463370 KIF28PB7ZC32 967 aa14.97□□□□□ -0.01
VAPB-203ENST00000463370 BBOX1O75936 387 aa14.97□□□□□ -0.01
VAPB-203ENST00000463370 RXRBP28702 533 aa14.97□□□□□ -0.01
VAPB-203ENST00000463370 MSL1Q68DK7 614 aa14.97□□□□□ -0.01
VAPB-203ENST00000463370 C15orf52Q6ZUT6 534 aaKnown RBP14.97□□□□□ -0.01
VAPB-203ENST00000463370 ZNF804AQ7Z570 1209 aa14.97□□□□□ -0.01
VAPB-203ENST00000463370 RNF41Q9H4P4 317 aaPredicted RBP14.97□□□□□ -0.01
VAPB-203ENST00000463370 CD209Q9NNX6 404 aa14.97□□□□□ -0.01
VAPB-203ENST00000463370 LDHBP07195 334 aaKnown RBP14.97□□□□□ -0.01
VAPB-203ENST00000463370 WTAPQ15007 396 aa14.97□□□□□ -0.01
VAPB-203ENST00000463370 GIMAP6Q6P9H5 292 aa14.97□□□□□ -0.01
VAPB-203ENST00000463370 CMTR1Q8N1G2 835 aaKnown RBP14.97□□□□□ -0.01
VAPB-203ENST00000463370 TBC1D16Q8TBP0 767 aa14.97□□□□□ -0.01
VAPB-203ENST00000463370 CHMP4CQ96CF2 233 aa14.97□□□□□ -0.01
VAPB-203ENST00000463370 WDR66Q8TBY9 1149 aa14.96□□□□□ -0.01
VAPB-203ENST00000463370 CRAMP1Q96RY5 1269 aa14.96□□□□□ -0.01
VAPB-203ENST00000463370 ZBTB22O15209 634 aa14.96□□□□□ -0.02
VAPB-203ENST00000463370 POLR3DP05423 398 aaPredicted RBP14.96□□□□□ -0.02
VAPB-203ENST00000463370 ATP2B4P23634 1241 aa14.96□□□□□ -0.02
VAPB-203ENST00000463370 SEC23AQ15436 765 aa14.96□□□□□ -0.02
VAPB-203ENST00000463370 CRNKL1Q9BZJ0 848 aaKnown RBP14.96□□□□□ -0.02
VAPB-203ENST00000463370 RGS17Q9UGC6 210 aaPredicted RBP14.96□□□□□ -0.02
VAPB-203ENST00000463370 TNKSO95271 1327 aa14.96□□□□□ -0.02
VAPB-203ENST00000463370 PPEF1O14829 653 aaPredicted RBP14.95□□□□□ -0.02
VAPB-203ENST00000463370 MMP10P09238 476 aa14.95□□□□□ -0.02
VAPB-203ENST00000463370 SPTY2D1Q68D10 685 aaPredicted RBP14.95□□□□□ -0.02
VAPB-203ENST00000463370 NLGN1Q8N2Q7 840 aa14.95□□□□□ -0.02
VAPB-203ENST00000463370 SH3RF3Q8TEJ3 882 aaPredicted RBP14.95□□□□□ -0.02
VAPB-203ENST00000463370 ESR2Q92731 530 aa14.95□□□□□ -0.02
VAPB-203ENST00000463370 ALG1Q9BT22 464 aa14.95□□□□□ -0.02
VAPB-203ENST00000463370 TSPY26PQ9H489 355 aa14.95□□□□□ -0.02
VAPB-203ENST00000463370 PODXL2Q9NZ53 605 aa14.95□□□□□ -0.02
VAPB-203ENST00000463370 FGRP09769 529 aa14.95□□□□□ -0.02
VAPB-203ENST00000463370 USP17L8P0C7I0 530 aa14.95□□□□□ -0.02
VAPB-203ENST00000463370 GUCY1A2P33402 732 aa14.95□□□□□ -0.02
VAPB-203ENST00000463370 CCDC82Q8N4S0 544 aa14.95□□□□□ -0.02
VAPB-203ENST00000463370 ENAHQ8N8S7 591 aaPredicted RBP14.95□□□□□ -0.02
VAPB-203ENST00000463370 UBAC1Q9BSL1 405 aa14.95□□□□□ -0.02
VAPB-203ENST00000463370 RTN4Q9NQC3 1192 aaKnown RBP14.95□□□□□ -0.02
VAPB-203ENST00000463370 DACT1Q9NYF0 836 aa14.95□□□□□ -0.02
VAPB-203ENST00000463370 CFAP45Q9UL16 551 aa14.95□□□□□ -0.02
VAPB-203ENST00000463370 DUOX1Q9NRD9 1551 aa14.94□□□□□ -0.02
VAPB-203ENST00000463370 C6orf229H3BNL8 230 aa14.94□□□□□ -0.02
VAPB-203ENST00000463370 NMT2O60551 498 aa14.94□□□□□ -0.02
VAPB-203ENST00000463370 SRGNP10124 158 aa14.94□□□□□ -0.02
VAPB-203ENST00000463370 IL1R1P14778 569 aa14.94□□□□□ -0.02
VAPB-203ENST00000463370 SART3Q15020 963 aaKnown RBP14.94□□□□□ -0.02
VAPB-203ENST00000463370 CAMK4Q16566 473 aa14.94□□□□□ -0.02
VAPB-203ENST00000463370 MKRN1Q9UHC7 482 aaKnown RBP14.94□□□□□ -0.02
VAPB-203ENST00000463370 RCOR1Q9UKL0 485 aa14.94□□□□□ -0.02
VAPB-203ENST00000463370 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.94□□□□□ -0.02
VAPB-203ENST00000463370 MYH13Q9UKX3 1938 aa14.94□□□□□ -0.02
VAPB-203ENST00000463370 NR1I2O75469 434 aa14.93□□□□□ -0.02
VAPB-203ENST00000463370 IARSP41252 1262 aaKnown RBP14.93□□□□□ -0.02
VAPB-203ENST00000463370 KIF23Q02241 960 aaPredicted RBP14.93□□□□□ -0.02
VAPB-203ENST00000463370 ZNF654Q8IZM8 581 aa14.93□□□□□ -0.02
VAPB-203ENST00000463370 NUP133Q8WUM0 1156 aa14.93□□□□□ -0.02
VAPB-203ENST00000463370 ZSCAN10Q96SZ4 725 aaPredicted RBP14.93□□□□□ -0.02
VAPB-203ENST00000463370 SLC26A6Q9BXS9 759 aa14.93□□□□□ -0.02
VAPB-203ENST00000463370 ATP8A2Q9NTI2 1148 aa14.93□□□□□ -0.02
VAPB-203ENST00000463370 BAZ2AQ9UIF9 1905 aaKnown RBP14.93□□□□□ -0.02
VAPB-203ENST00000463370 ERICH2A1L162 156 aa14.93□□□□□ -0.02
VAPB-203ENST00000463370 GOLGA6L4A6NEF3 574 aa14.93□□□□□ -0.02
VAPB-203ENST00000463370 RIMBP2O15034 1052 aa14.93□□□□□ -0.02
VAPB-203ENST00000463370 CDKL5O76039 1030 aa14.93□□□□□ -0.02
VAPB-203ENST00000463370 FAM47AQ5JRC9 791 aa14.93□□□□□ -0.02
VAPB-203ENST00000463370 FUCA2Q9BTY2 467 aa14.93□□□□□ -0.02
VAPB-203ENST00000463370 MCM9Q9NXL9 1143 aa14.93□□□□□ -0.02
VAPB-203ENST00000463370 NID2Q14112 1375 aa14.93□□□□□ -0.02
VAPB-203ENST00000463370 KCNA4P22459 653 aa14.92□□□□□ -0.02
VAPB-203ENST00000463370 RTN1Q16799 776 aa14.92□□□□□ -0.02
VAPB-203ENST00000463370 KRT40Q6A162 431 aa14.92□□□□□ -0.02
VAPB-203ENST00000463370 SYNE3Q6ZMZ3 975 aa14.92□□□□□ -0.02
VAPB-203ENST00000463370 BICD2Q8TD16 824 aa14.92□□□□□ -0.02
VAPB-203ENST00000463370 ANO8Q9HCE9 1232 aaPredicted RBP14.92□□□□□ -0.02
VAPB-203ENST00000463370 ATP6V0A2Q9Y487 856 aa14.92□□□□□ -0.02
VAPB-203ENST00000463370 CLIC4Q9Y696 253 aa14.92□□□□□ -0.02
VAPB-203ENST00000463370 CHD4Q14839 1912 aa14.92□□□□□ -0.02
VAPB-203ENST00000463370 POTEAQ6S8J7 498 aa14.92□□□□□ -0.02
VAPB-203ENST00000463370 NBPF11Q86T75 865 aa14.92□□□□□ -0.02
VAPB-203ENST00000463370 SP8Q8IXZ3 490 aa14.92□□□□□ -0.02
VAPB-203ENST00000463370 RTFDC1Q9BY42 306 aaPredicted RBP14.92□□□□□ -0.02
VAPB-203ENST00000463370 ANKRD31Q8N7Z5 1873 aa14.92□□□□□ -0.02
VAPB-203ENST00000463370 FMNL1O95466 1100 aaPredicted RBP14.91□□□□□ -0.02
VAPB-203ENST00000463370 IFNAR1P17181 557 aa14.91□□□□□ -0.02
VAPB-203ENST00000463370 CPLX2Q6PUV4 134 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms