RNA–Protein interactions for RNA: ENST00000460675.5

COMMD6-206, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-206ENST00000460675 LRCH3Q96II8 777 aa13.13□□□□□ -0.31
COMMD6-206ENST00000460675 MRS2Q9HD23 443 aa13.13□□□□□ -0.31
COMMD6-206ENST00000460675 FAM198AQ9UFP1 575 aa13.13□□□□□ -0.31
COMMD6-206ENST00000460675 A0A0G2JLL6 359 aaPredicted RBP13.12□□□□□ -0.31
COMMD6-206ENST00000460675 LDHBP07195 334 aaKnown RBP13.12□□□□□ -0.31
COMMD6-206ENST00000460675 PRDX5P30044 214 aa13.12□□□□□ -0.31
COMMD6-206ENST00000460675 PRRT2Q7Z6L0 340 aaPredicted RBP13.12□□□□□ -0.31
COMMD6-206ENST00000460675 ZSCAN29Q8IWY8 852 aaPredicted RBP13.12□□□□□ -0.31
COMMD6-206ENST00000460675 SCYL3Q8IZE3 742 aa13.12□□□□□ -0.31
COMMD6-206ENST00000460675 PXYLP1Q8TE99 480 aa13.12□□□□□ -0.31
COMMD6-206ENST00000460675 SMCR8Q8TEV9 937 aaPredicted RBP13.12□□□□□ -0.31
COMMD6-206ENST00000460675 LPIN2Q92539 896 aa13.12□□□□□ -0.31
COMMD6-206ENST00000460675 LRRFIP2Q9Y608 721 aaKnown RBP13.12□□□□□ -0.31
COMMD6-206ENST00000460675 EYA2O00167 538 aa13.11□□□□□ -0.31
COMMD6-206ENST00000460675 CAPN2P17655 700 aa13.11□□□□□ -0.31
COMMD6-206ENST00000460675 PTPRAP18433 802 aa13.11□□□□□ -0.31
COMMD6-206ENST00000460675 COA7Q96BR5 231 aa13.11□□□□□ -0.31
COMMD6-206ENST00000460675 PAWRQ96IZ0 340 aaKnown RBP13.11□□□□□ -0.31
COMMD6-206ENST00000460675 GNL3LQ9NVN8 582 aaKnown RBP13.11□□□□□ -0.31
COMMD6-206ENST00000460675 AFG3L2Q9Y4W6 797 aa13.11□□□□□ -0.31
COMMD6-206ENST00000460675 MYH13Q9UKX3 1938 aa13.1□□□□□ -0.31
COMMD6-206ENST00000460675 PHF20L1A8MW92 1017 aa13.1□□□□□ -0.31
COMMD6-206ENST00000460675 RGS3P49796 1198 aa13.1□□□□□ -0.31
COMMD6-206ENST00000460675 IRF5Q13568 498 aa13.1□□□□□ -0.31
COMMD6-206ENST00000460675 NECAB2Q7Z6G3 386 aa13.1□□□□□ -0.31
COMMD6-206ENST00000460675 SLC45A1Q9Y2W3 748 aa13.1□□□□□ -0.31
COMMD6-206ENST00000460675 RANBP2P49792 3224 aaKnown RBP13.1□□□□□ -0.31
COMMD6-206ENST00000460675 TRIM75PA6NK02 468 aa13.09□□□□□ -0.31
COMMD6-206ENST00000460675 ANKRD13CQ8N6S4 541 aa13.09□□□□□ -0.31
COMMD6-206ENST00000460675 USP44Q9H0E7 712 aa13.09□□□□□ -0.31
COMMD6-206ENST00000460675 PAK6Q9NQU5 681 aaPredicted RBP13.09□□□□□ -0.31
COMMD6-206ENST00000460675 CTNND1O60716 968 aaKnown RBP13.08□□□□□ -0.32
COMMD6-206ENST00000460675 ENTPD3O75355 529 aa13.08□□□□□ -0.32
COMMD6-206ENST00000460675 SLURP2P0DP57 97 aa13.08□□□□□ -0.32
COMMD6-206ENST00000460675 ATP2B3Q16720 1220 aa13.08□□□□□ -0.32
COMMD6-206ENST00000460675 C7orf61Q8IZ16 206 aa13.08□□□□□ -0.32
COMMD6-206ENST00000460675 MRPL50Q8N5N7 158 aaKnown RBP13.08□□□□□ -0.32
COMMD6-206ENST00000460675 DIS3LQ8TF46 1054 aaKnown RBP13.08□□□□□ -0.32
COMMD6-206ENST00000460675 CRISPLD2Q9H0B8 497 aa13.08□□□□□ -0.32
COMMD6-206ENST00000460675 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.08□□□□□ -0.32
COMMD6-206ENST00000460675 SIL1Q9H173 461 aa13.08□□□□□ -0.32
COMMD6-206ENST00000460675 DENND2AQ9ULE3 1009 aa13.08□□□□□ -0.32
COMMD6-206ENST00000460675 DDTLA6NHG4 134 aaPredicted RBP13.07□□□□□ -0.32
COMMD6-206ENST00000460675 RFX5P48382 616 aaPredicted RBP13.07□□□□□ -0.32
COMMD6-206ENST00000460675 PICALMQ13492 652 aa13.07□□□□□ -0.32
COMMD6-206ENST00000460675 SH3BP5LQ7L8J4 393 aa13.07□□□□□ -0.32
COMMD6-206ENST00000460675 ATG9AQ7Z3C6 839 aa13.07□□□□□ -0.32
COMMD6-206ENST00000460675 CCDC84Q86UT8 332 aaPredicted RBP13.07□□□□□ -0.32
COMMD6-206ENST00000460675 IDI2Q9BXS1 227 aa13.07□□□□□ -0.32
COMMD6-206ENST00000460675 CEP126Q9P2H0 1117 aa13.07□□□□□ -0.32
COMMD6-206ENST00000460675 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.07□□□□□ -0.32
COMMD6-206ENST00000460675 ZMYND8Q9ULU4 1186 aaPredicted RBP13.07□□□□□ -0.32
COMMD6-206ENST00000460675 AGTPBP1Q9UPW5 1226 aa13.07□□□□□ -0.32
COMMD6-206ENST00000460675 ATRNL1Q5VV63 1379 aa13.07□□□□□ -0.32
COMMD6-206ENST00000460675 BMP8BP34820 402 aa13.06□□□□□ -0.32
COMMD6-206ENST00000460675 PHKA1P46020 1223 aa13.06□□□□□ -0.32
COMMD6-206ENST00000460675 MAP3K10Q02779 954 aa13.06□□□□□ -0.32
COMMD6-206ENST00000460675 TREML2Q5T2D2 321 aa13.06□□□□□ -0.32
COMMD6-206ENST00000460675 DZIP1Q86YF9 867 aaKnown RBP13.06□□□□□ -0.32
COMMD6-206ENST00000460675 DEFB123Q8N688 67 aa13.06□□□□□ -0.32
COMMD6-206ENST00000460675 GDF15Q99988 308 aa13.06□□□□□ -0.32
COMMD6-206ENST00000460675 PNMA3Q9UL41 463 aa13.06□□□□□ -0.32
COMMD6-206ENST00000460675 PTPRCP08575 1304 aa13.06□□□□□ -0.32
COMMD6-206ENST00000460675 SALL1Q9NSC2 1324 aa13.06□□□□□ -0.32
COMMD6-206ENST00000460675 DOCK2Q92608 1830 aa13.06□□□□□ -0.32
COMMD6-206ENST00000460675 DOCK3Q8IZD9 2030 aa13.05□□□□□ -0.32
COMMD6-206ENST00000460675 SEMA3EO15041 775 aa13.05□□□□□ -0.32
COMMD6-206ENST00000460675 SYN1P17600 705 aa13.05□□□□□ -0.32
COMMD6-206ENST00000460675 MNX1P50219 401 aaPredicted RBP13.05□□□□□ -0.32
COMMD6-206ENST00000460675 Q7L0L9 218 aa13.05□□□□□ -0.32
COMMD6-206ENST00000460675 SLF2Q8IX21 1173 aa13.05□□□□□ -0.32
COMMD6-206ENST00000460675 ZGPATQ8N5A5 531 aaKnown RBP13.05□□□□□ -0.32
COMMD6-206ENST00000460675 ANKLE1Q8NAG6 615 aa13.05□□□□□ -0.32
COMMD6-206ENST00000460675 NBPF3Q9H094 633 aa13.05□□□□□ -0.32
COMMD6-206ENST00000460675 HMX1Q9NP08 348 aaPredicted RBP13.05□□□□□ -0.32
COMMD6-206ENST00000460675 ABCF2Q9UG63 623 aa13.05□□□□□ -0.32
COMMD6-206ENST00000460675 MYH2Q9UKX2 1941 aa13.05□□□□□ -0.32
COMMD6-206ENST00000460675 ALPK3Q96L96 1907 aa13.04□□□□□ -0.32
COMMD6-206ENST00000460675 HMGCRP04035 888 aa13.04□□□□□ -0.32
COMMD6-206ENST00000460675 BTDP43251 543 aa13.04□□□□□ -0.32
COMMD6-206ENST00000460675 SPP2Q13103 211 aa13.04□□□□□ -0.32
COMMD6-206ENST00000460675 FAM110CQ1W6H9 321 aa13.04□□□□□ -0.32
COMMD6-206ENST00000460675 GPR153Q6NV75 609 aa13.04□□□□□ -0.32
COMMD6-206ENST00000460675 FAM9BQ8IZU0 186 aa13.04□□□□□ -0.32
COMMD6-206ENST00000460675 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.04□□□□□ -0.32
COMMD6-206ENST00000460675 DDX4Q9NQI0 724 aaKnown RBP13.04□□□□□ -0.32
COMMD6-206ENST00000460675 GAKO14976 1311 aa13.04□□□□□ -0.32
COMMD6-206ENST00000460675 RPTORQ8N122 1335 aa13.04□□□□□ -0.32
COMMD6-206ENST00000460675 PTPRFP10586 1907 aa13.03□□□□□ -0.32
COMMD6-206ENST00000460675 FAM196BA6NMK8 535 aa13.03□□□□□ -0.32
COMMD6-206ENST00000460675 CIAO1O76071 339 aa13.03□□□□□ -0.32
COMMD6-206ENST00000460675 GCLCP48506 637 aaPredicted RBP13.03□□□□□ -0.32
COMMD6-206ENST00000460675 TRIM32Q13049 653 aa13.03□□□□□ -0.32
COMMD6-206ENST00000460675 PABPC4Q13310 644 aaKnown RBP eCLIP13.03□□□□□ -0.325e-7■□□□□ 10
COMMD6-206ENST00000460675 SPTY2D1Q68D10 685 aaPredicted RBP13.03□□□□□ -0.32
COMMD6-206ENST00000460675 CCDC102BQ68D86 513 aa13.03□□□□□ -0.32
COMMD6-206ENST00000460675 PROCA1Q8NCQ7 364 aaPredicted RBP13.03□□□□□ -0.32
COMMD6-206ENST00000460675 C11orf49Q9H6J7 331 aa13.03□□□□□ -0.32
COMMD6-206ENST00000460675 FBXO3Q9UK99 471 aa13.03□□□□□ -0.32
COMMD6-206ENST00000460675 DOCK1Q14185 1865 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms