RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 CLRN2A0PK11 232 aa14.7□□□□□ -0.06
HDAC4-206ENST00000460235 PICALMQ13492 652 aa14.7□□□□□ -0.06
HDAC4-206ENST00000460235 SBK1Q52WX2 424 aa14.7□□□□□ -0.06
HDAC4-206ENST00000460235 ANGEL2Q5VTE6 544 aaKnown RBP14.7□□□□□ -0.06
HDAC4-206ENST00000460235 FOXP4Q8IVH2 680 aaPredicted RBP14.7□□□□□ -0.06
HDAC4-206ENST00000460235 TRPM4Q8TD43 1214 aa14.7□□□□□ -0.06
HDAC4-206ENST00000460235 ZNF526Q8TF50 670 aaPredicted RBP14.7□□□□□ -0.06
HDAC4-206ENST00000460235 RNF41Q9H4P4 317 aaPredicted RBP14.7□□□□□ -0.06
HDAC4-206ENST00000460235 DCP1AQ9NPI6 582 aaPredicted RBP14.7□□□□□ -0.06
HDAC4-206ENST00000460235 GGA3Q9NZ52 723 aa14.7□□□□□ -0.06
HDAC4-206ENST00000460235 PI4KBQ9UBF8 816 aa14.7□□□□□ -0.06
HDAC4-206ENST00000460235 FLT1P17948 1338 aa14.69□□□□□ -0.06
HDAC4-206ENST00000460235 ZNF646O15015 1829 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-206ENST00000460235 SRCAPQ6ZRS2 3230 aa14.69□□□□□ -0.06
HDAC4-206ENST00000460235 GSG1L2A8MUP6 293 aa14.69□□□□□ -0.06
HDAC4-206ENST00000460235 TCP10L2B9ZVM9 353 aa14.69□□□□□ -0.06
HDAC4-206ENST00000460235 ZNF213O14771 459 aa14.69□□□□□ -0.06
HDAC4-206ENST00000460235 WDHD1O75717 1129 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-206ENST00000460235 DCAF15Q66K64 600 aa14.69□□□□□ -0.06
HDAC4-206ENST00000460235 CCDC129Q6ZRS4 1044 aa14.69□□□□□ -0.06
HDAC4-206ENST00000460235 ZNF589Q86UQ0 364 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-206ENST00000460235 MAPKAPK5Q8IW41 473 aa14.69□□□□□ -0.06
HDAC4-206ENST00000460235 IL27Q8NEV9 243 aa14.69□□□□□ -0.06
HDAC4-206ENST00000460235 MAP4K1Q92918 833 aa14.69□□□□□ -0.06
HDAC4-206ENST00000460235 OSBPL5Q9H0X9 879 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-206ENST00000460235 COL2A1P02458 1487 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-206ENST00000460235 MYO5AQ9Y4I1 1855 aaKnown RBP14.68□□□□□ -0.06
HDAC4-206ENST00000460235 SHTN1A0MZ66 631 aa14.68□□□□□ -0.06
HDAC4-206ENST00000460235 PDE4BQ07343 736 aa14.68□□□□□ -0.06
HDAC4-206ENST00000460235 KRT32Q14532 448 aa14.68□□□□□ -0.06
HDAC4-206ENST00000460235 RASA3Q14644 834 aa14.68□□□□□ -0.06
HDAC4-206ENST00000460235 SLFNL1Q499Z3 407 aa14.68□□□□□ -0.06
HDAC4-206ENST00000460235 KRT26Q7Z3Y9 468 aa14.68□□□□□ -0.06
HDAC4-206ENST00000460235 CRACR2BQ8N4Y2 399 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-206ENST00000460235 SDR42E1Q8WUS8 393 aa14.68□□□□□ -0.06
HDAC4-206ENST00000460235 DEFB129Q9H1M3 183 aa14.68□□□□□ -0.06
HDAC4-206ENST00000460235 SWAP70Q9UH65 585 aa14.68□□□□□ -0.06
HDAC4-206ENST00000460235 HERC5Q9UII4 1024 aaKnown RBP14.68□□□□□ -0.06
HDAC4-206ENST00000460235 POTECB2RU33 542 aa14.67□□□□□ -0.06
HDAC4-206ENST00000460235 USP17L12C9JPN9 530 aa14.67□□□□□ -0.06
HDAC4-206ENST00000460235 USP17L21D6R901 530 aa14.67□□□□□ -0.06
HDAC4-206ENST00000460235 FGAP02671 866 aa14.67□□□□□ -0.06
HDAC4-206ENST00000460235 HIRAP54198 1017 aaPredicted RBP14.67□□□□□ -0.06
HDAC4-206ENST00000460235 TCP10Q12799 353 aa14.67□□□□□ -0.06
HDAC4-206ENST00000460235 TRDNQ13061 729 aa14.67□□□□□ -0.06
HDAC4-206ENST00000460235 C8orf34Q49A92 452 aa14.67□□□□□ -0.06
HDAC4-206ENST00000460235 LSG1Q9H089 658 aaKnown RBP14.67□□□□□ -0.06
HDAC4-206ENST00000460235 EHD4Q9H223 541 aa14.67□□□□□ -0.06
HDAC4-206ENST00000460235 NMRK2Q9NPI5 230 aa14.67□□□□□ -0.06
HDAC4-206ENST00000460235 ATRNL1Q5VV63 1379 aa14.66□□□□□ -0.06
HDAC4-206ENST00000460235 MINDY4BA8MYZ0 360 aa14.66□□□□□ -0.06
HDAC4-206ENST00000460235 PRKAB2O43741 272 aa14.66□□□□□ -0.06
HDAC4-206ENST00000460235 EGFRP00533 1210 aa14.66□□□□□ -0.06
HDAC4-206ENST00000460235 CHGBP05060 677 aa14.66□□□□□ -0.06
HDAC4-206ENST00000460235 CHADLQ6NUI6 762 aa14.66□□□□□ -0.06
HDAC4-206ENST00000460235 CSRNP1Q96S65 589 aa14.66□□□□□ -0.06
HDAC4-206ENST00000460235 BACH2Q9BYV9 841 aa14.66□□□□□ -0.06
HDAC4-206ENST00000460235 CNNM2Q9H8M5 875 aa14.66□□□□□ -0.06
HDAC4-206ENST00000460235 FAM198AQ9UFP1 575 aa14.66□□□□□ -0.06
HDAC4-206ENST00000460235 MKRN1Q9UHC7 482 aaKnown RBP14.66□□□□□ -0.06
HDAC4-206ENST00000460235 SERPINB13Q9UIV8 391 aa14.66□□□□□ -0.06
HDAC4-206ENST00000460235 PCDHAC2Q9Y5I4 1007 aa14.66□□□□□ -0.06
HDAC4-206ENST00000460235 RBM8AQ9Y5S9 174 aaKnown RBP14.66□□□□□ -0.06
HDAC4-206ENST00000460235 PPP1R12BO60237 982 aaPredicted RBP14.65□□□□□ -0.06
HDAC4-206ENST00000460235 TBC1D12O60347 775 aa14.65□□□□□ -0.06
HDAC4-206ENST00000460235 CACNB3P54284 484 aa14.65□□□□□ -0.06
HDAC4-206ENST00000460235 PPARAQ07869 468 aa14.65□□□□□ -0.06
HDAC4-206ENST00000460235 NFIAQ12857 509 aa14.65□□□□□ -0.06
HDAC4-206ENST00000460235 PPP4R3BQ5MIZ7 849 aa14.65□□□□□ -0.06
HDAC4-206ENST00000460235 C12orf60Q5U649 245 aa14.65□□□□□ -0.06
HDAC4-206ENST00000460235 VPS53Q5VIR6 699 aa14.65□□□□□ -0.06
HDAC4-206ENST00000460235 CTR9Q6PD62 1173 aa14.65□□□□□ -0.06
HDAC4-206ENST00000460235 SMC1BQ8NDV3 1235 aa14.65□□□□□ -0.06
HDAC4-206ENST00000460235 USP26Q9BXU7 913 aa14.65□□□□□ -0.06
HDAC4-206ENST00000460235 MKNK2Q9HBH9 465 aa14.65□□□□□ -0.06
HDAC4-206ENST00000460235 ANAPC4Q9UJX5 808 aa14.65□□□□□ -0.06
HDAC4-206ENST00000460235 HMGB1P09429 215 aaKnown RBP14.64□□□□□ -0.07
HDAC4-206ENST00000460235 PSMA5P28066 241 aa14.64□□□□□ -0.07
HDAC4-206ENST00000460235 ANAPC15P60006 121 aa14.64□□□□□ -0.07
HDAC4-206ENST00000460235 MFSD6Q6ZSS7 791 aa14.64□□□□□ -0.07
HDAC4-206ENST00000460235 KRT23Q9C075 422 aa14.64□□□□□ -0.07
HDAC4-206ENST00000460235 GINM1Q9NU53 330 aa14.64□□□□□ -0.07
HDAC4-206ENST00000460235 SAP30BPQ9UHR5 308 aaKnown RBP14.64□□□□□ -0.07
HDAC4-206ENST00000460235 PALD1Q9ULE6 856 aa14.64□□□□□ -0.07
HDAC4-206ENST00000460235 TOMM70O94826 608 aa14.63□□□□□ -0.07
HDAC4-206ENST00000460235 PTH1RQ03431 593 aa14.63□□□□□ -0.07
HDAC4-206ENST00000460235 NECTIN1Q15223 517 aa14.63□□□□□ -0.07
HDAC4-206ENST00000460235 CCDC178Q5BJE1 867 aa14.63□□□□□ -0.07
HDAC4-206ENST00000460235 RALYLQ86SE5 291 aaKnown RBP14.63□□□□□ -0.07
HDAC4-206ENST00000460235 USP48Q86UV5 1035 aa14.63□□□□□ -0.07
HDAC4-206ENST00000460235 ZNF444Q8N0Y2 327 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-206ENST00000460235 RBM46Q8TBY0 533 aaKnown RBP14.63□□□□□ -0.07
HDAC4-206ENST00000460235 CCDC17Q96LX7 622 aa14.63□□□□□ -0.07
HDAC4-206ENST00000460235 EPB41L4AQ9HCS5 686 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-206ENST00000460235 DDX4Q9NQI0 724 aaKnown RBP14.63□□□□□ -0.07
HDAC4-206ENST00000460235 ECM29Q5VYK3 1845 aa14.63□□□□□ -0.07
HDAC4-206ENST00000460235 UNCXA6NJT0 531 aa14.62□□□□□ -0.07
HDAC4-206ENST00000460235 HSPA4P34932 840 aa14.62□□□□□ -0.07
HDAC4-206ENST00000460235 FKBP1BP68106 108 aa14.62□□□□□ -0.07
HDAC4-206ENST00000460235 FSTL1Q12841 308 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms