RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 PITPNM2Q9BZ72 1349 aa12.32□□□□□ -0.44
GARNL3-211ENST00000460176 SIPA1L1O43166 1804 aa12.32□□□□□ -0.44
GARNL3-211ENST00000460176 CNTNAP1P78357 1384 aa12.31□□□□□ -0.44
GARNL3-211ENST00000460176 PLCG2P16885 1265 aa12.31□□□□□ -0.44
GARNL3-211ENST00000460176 NFIAQ12857 509 aa12.31□□□□□ -0.44
GARNL3-211ENST00000460176 FKBP1CQ5VVH2 108 aa12.31□□□□□ -0.44
GARNL3-211ENST00000460176 ZNF589Q86UQ0 364 aaPredicted RBP12.31□□□□□ -0.44
GARNL3-211ENST00000460176 LDHDQ86WU2 507 aa12.31□□□□□ -0.44
GARNL3-211ENST00000460176 AIDAQ96BJ3 306 aa12.31□□□□□ -0.44
GARNL3-211ENST00000460176 IDI2Q9BXS1 227 aa12.31□□□□□ -0.44
GARNL3-211ENST00000460176 DDX4Q9NQI0 724 aaKnown RBP12.31□□□□□ -0.44
GARNL3-211ENST00000460176 FAM198AQ9UFP1 575 aa12.31□□□□□ -0.44
GARNL3-211ENST00000460176 LAMA4Q16363 1823 aa12.31□□□□□ -0.44
GARNL3-211ENST00000460176 RAD50Q92878 1312 aa12.31□□□□□ -0.44
GARNL3-211ENST00000460176 COL2A1P02458 1487 aaPredicted RBP12.3□□□□□ -0.44
GARNL3-211ENST00000460176 TCP10L2B9ZVM9 353 aa12.3□□□□□ -0.44
GARNL3-211ENST00000460176 FOXP2O15409 715 aa12.3□□□□□ -0.44
GARNL3-211ENST00000460176 PRKAB2O43741 272 aa12.3□□□□□ -0.44
GARNL3-211ENST00000460176 APOBEC3FQ8IUX4 373 aaKnown RBP12.3□□□□□ -0.44
GARNL3-211ENST00000460176 RUFY2Q8WXA3 655 aa12.3□□□□□ -0.44
GARNL3-211ENST00000460176 ESYT1Q9BSJ8 1104 aa12.3□□□□□ -0.44
GARNL3-211ENST00000460176 CRNKL1Q9BZJ0 848 aaKnown RBP12.3□□□□□ -0.44
GARNL3-211ENST00000460176 VEZTQ9HBM0 779 aa12.3□□□□□ -0.44
GARNL3-211ENST00000460176 TMOD2Q9NZR1 351 aa12.3□□□□□ -0.44
GARNL3-211ENST00000460176 SCAF8Q9UPN6 1271 aaKnown RBP12.3□□□□□ -0.44
GARNL3-211ENST00000460176 FLT1P17948 1338 aa12.3□□□□□ -0.44
GARNL3-211ENST00000460176 CCDC171Q6TFL3 1326 aa12.3□□□□□ -0.44
GARNL3-211ENST00000460176 SGSM2O43147 1006 aa12.29□□□□□ -0.44
GARNL3-211ENST00000460176 VPS53Q5VIR6 699 aa12.29□□□□□ -0.44
GARNL3-211ENST00000460176 ZFPM1Q8IX07 1006 aa12.29□□□□□ -0.44
GARNL3-211ENST00000460176 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
GARNL3-211ENST00000460176 SDR42E1Q8WUS8 393 aa12.29□□□□□ -0.44
GARNL3-211ENST00000460176 MKRN1Q9UHC7 482 aaKnown RBP12.29□□□□□ -0.44
GARNL3-211ENST00000460176 CLEC11AQ9Y240 323 aa12.29□□□□□ -0.44
GARNL3-211ENST00000460176 SLC4A4Q9Y6R1 1079 aa12.29□□□□□ -0.44
GARNL3-211ENST00000460176 GSG1L2A8MUP6 293 aa12.28□□□□□ -0.44
GARNL3-211ENST00000460176 ADM5C9JUS6 153 aa12.28□□□□□ -0.44
GARNL3-211ENST00000460176 ENTPD3O75355 529 aa12.28□□□□□ -0.44
GARNL3-211ENST00000460176 GNAT2P19087 354 aa12.28□□□□□ -0.44
GARNL3-211ENST00000460176 USP5P45974 858 aa12.28□□□□□ -0.44
GARNL3-211ENST00000460176 TCP10Q12799 353 aa12.28□□□□□ -0.44
GARNL3-211ENST00000460176 PICALMQ13492 652 aa12.28□□□□□ -0.44
GARNL3-211ENST00000460176 TNFAIP1Q13829 316 aa12.28□□□□□ -0.44
GARNL3-211ENST00000460176 RASA3Q14644 834 aa12.28□□□□□ -0.44
GARNL3-211ENST00000460176 MAP1SQ66K74 1059 aaPredicted RBP12.28□□□□□ -0.44
GARNL3-211ENST00000460176 SH3BP5LQ7L8J4 393 aa12.28□□□□□ -0.44
GARNL3-211ENST00000460176 FAM83AQ86UY5 434 aa12.28□□□□□ -0.44
GARNL3-211ENST00000460176 MAPKAPK5Q8IW41 473 aa12.28□□□□□ -0.44
GARNL3-211ENST00000460176 FAM151AQ8WW52 585 aa12.28□□□□□ -0.44
GARNL3-211ENST00000460176 DCPSQ96C86 337 aaKnown RBP12.28□□□□□ -0.44
GARNL3-211ENST00000460176 DEFB129Q9H1M3 183 aa12.28□□□□□ -0.44
GARNL3-211ENST00000460176 EPB41L4AQ9HCS5 686 aaPredicted RBP12.28□□□□□ -0.44
GARNL3-211ENST00000460176 ATP8A2Q9NTI2 1148 aa12.28□□□□□ -0.44
GARNL3-211ENST00000460176 ATRNL1Q5VV63 1379 aa12.28□□□□□ -0.44
GARNL3-211ENST00000460176 RPAP1Q9BWH6 1393 aaPredicted RBP12.28□□□□□ -0.44
GARNL3-211ENST00000460176 TRPM7Q96QT4 1865 aa12.27□□□□□ -0.44
GARNL3-211ENST00000460176 TNNI2P48788 182 aa12.27□□□□□ -0.45
GARNL3-211ENST00000460176 MFAP1P55081 439 aaKnown RBP12.27□□□□□ -0.45
GARNL3-211ENST00000460176 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
GARNL3-211ENST00000460176 CASC1Q6TDU7 716 aa12.27□□□□□ -0.45
GARNL3-211ENST00000460176 KRT26Q7Z3Y9 468 aa12.27□□□□□ -0.45
GARNL3-211ENST00000460176 SULF1Q8IWU6 871 aa12.27□□□□□ -0.45
GARNL3-211ENST00000460176 TEPSINQ96N21 525 aa12.27□□□□□ -0.45
GARNL3-211ENST00000460176 GLIS2Q9BZE0 524 aaPredicted RBP12.27□□□□□ -0.45
GARNL3-211ENST00000460176 TMEM39BQ9GZU3 492 aa12.27□□□□□ -0.45
GARNL3-211ENST00000460176 OSBPL5Q9H0X9 879 aaPredicted RBP12.27□□□□□ -0.45
GARNL3-211ENST00000460176 DCP1AQ9NPI6 582 aaPredicted RBP12.27□□□□□ -0.45
GARNL3-211ENST00000460176 PPP2R3BQ9Y5P8 575 aa12.27□□□□□ -0.45
GARNL3-211ENST00000460176 PAPPA2Q9BXP8 1791 aa12.27□□□□□ -0.45
GARNL3-211ENST00000460176 SSC5DA1L4H1 1573 aa12.26□□□□□ -0.45
GARNL3-211ENST00000460176 DDTLA6NHG4 134 aaPredicted RBP12.26□□□□□ -0.45
GARNL3-211ENST00000460176 PATL2C9JE40 543 aaKnown RBP12.26□□□□□ -0.45
GARNL3-211ENST00000460176 HSPD1P10809 573 aaKnown RBP12.26□□□□□ -0.45
GARNL3-211ENST00000460176 GIMAP6Q6P9H5 292 aa12.26□□□□□ -0.45
GARNL3-211ENST00000460176 DLK2Q6UY11 383 aa12.26□□□□□ -0.45
GARNL3-211ENST00000460176 CDC37L1Q7L3B6 337 aa12.26□□□□□ -0.45
GARNL3-211ENST00000460176 USP48Q86UV5 1035 aa12.26□□□□□ -0.45
GARNL3-211ENST00000460176 CDAN1Q8IWY9 1227 aa12.26□□□□□ -0.45
GARNL3-211ENST00000460176 REM2Q8IYK8 340 aaPredicted RBP12.26□□□□□ -0.45
GARNL3-211ENST00000460176 IFNL3Q8IZI9 196 aa12.26□□□□□ -0.45
GARNL3-211ENST00000460176 SAP30BPQ9UHR5 308 aaKnown RBP12.26□□□□□ -0.45
GARNL3-211ENST00000460176 MYH8P13535 1937 aa12.25□□□□□ -0.45
GARNL3-211ENST00000460176 TOMM70O94826 608 aa12.25□□□□□ -0.45
GARNL3-211ENST00000460176 PRR29P0C7W0 189 aa12.25□□□□□ -0.45
GARNL3-211ENST00000460176 PTH1RQ03431 593 aa12.25□□□□□ -0.45
GARNL3-211ENST00000460176 EVX2Q03828 476 aa12.25□□□□□ -0.45
GARNL3-211ENST00000460176 C8orf34Q49A92 452 aa12.25□□□□□ -0.45
GARNL3-211ENST00000460176 RBM46Q8TBY0 533 aaKnown RBP12.25□□□□□ -0.45
GARNL3-211ENST00000460176 CDCA5Q96FF9 252 aa12.25□□□□□ -0.45
GARNL3-211ENST00000460176 DSCC1Q9BVC3 393 aa12.25□□□□□ -0.45
GARNL3-211ENST00000460176 LSG1Q9H089 658 aaKnown RBP12.25□□□□□ -0.45
GARNL3-211ENST00000460176 MCM9Q9NXL9 1143 aa12.25□□□□□ -0.45
GARNL3-211ENST00000460176 ZMYM6O95789 1325 aa12.25□□□□□ -0.45
GARNL3-211ENST00000460176 OTOFQ9HC10 1997 aa12.25□□□□□ -0.45
GARNL3-211ENST00000460176 TRAF5O00463 557 aa12.24□□□□□ -0.45
GARNL3-211ENST00000460176 ITGBL1O95965 494 aaPredicted RBP12.24□□□□□ -0.45
GARNL3-211ENST00000460176 APPP05067 770 aa12.24□□□□□ -0.45
GARNL3-211ENST00000460176 CYP2D6P10635 497 aa12.24□□□□□ -0.45
GARNL3-211ENST00000460176 TDO2P48775 406 aa12.24□□□□□ -0.45
GARNL3-211ENST00000460176 FMR1Q06787 632 aaKnown RBP eCLIP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms