RNA–Protein interactions for RNA: ENST00000459645.1

RGPD6-206, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 3

Gene RGPD6, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-206ENST00000459645 SMAD3P84022 425 aaKnown RBP5.31□□□□□ -1.56
RGPD6-206ENST00000459645 TFF2Q03403 129 aa5.31□□□□□ -1.56
RGPD6-206ENST00000459645 GSE1Q14687 1217 aa5.31□□□□□ -1.56
RGPD6-206ENST00000459645 CCDC85BQ15834 202 aaPredicted RBP5.31□□□□□ -1.56
RGPD6-206ENST00000459645 SUPT20HL1Q3ZLR7 823 aa5.31□□□□□ -1.56
RGPD6-206ENST00000459645 CTR9Q6PD62 1173 aa5.31□□□□□ -1.56
RGPD6-206ENST00000459645 ANKRD23Q86SG2 305 aa5.31□□□□□ -1.56
RGPD6-206ENST00000459645 ANKLE1Q8NAG6 615 aa5.31□□□□□ -1.56
RGPD6-206ENST00000459645 ZBTB38Q8NAP3 1195 aaPredicted RBP5.31□□□□□ -1.56
RGPD6-206ENST00000459645 FBXW7Q969H0 707 aa5.31□□□□□ -1.56
RGPD6-206ENST00000459645 MTA3Q9BTC8 594 aa5.31□□□□□ -1.56
RGPD6-206ENST00000459645 C1orf115Q9H7X2 142 aa5.31□□□□□ -1.56
RGPD6-206ENST00000459645 ANKIB1Q9P2G1 1089 aa5.31□□□□□ -1.56
RGPD6-206ENST00000459645 ABCF2Q9UG63 623 aa5.31□□□□□ -1.56
RGPD6-206ENST00000459645 SETXQ7Z333 2677 aaKnown RBP5.3□□□□□ -1.56
RGPD6-206ENST00000459645 ZFHX4Q86UP3 3567 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 NCOR2Q9Y618 2525 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 LAMB1P07942 1786 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 SMIM22K7EJ46 135 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 KRT37O76014 449 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 COL6A1P12109 1028 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 CAPN2P17655 700 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 PEX19P40855 299 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 KCNQ1P51787 676 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 FCGRTP55899 365 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 FOXK2Q01167 660 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 TRIM32Q13049 653 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 CDC37Q16543 378 aaPredicted RBP5.3□□□□□ -1.56
RGPD6-206ENST00000459645 LONRF3Q496Y0 759 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 CDCA8Q53HL2 280 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 HSP90B2PQ58FF3 399 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 GJC2Q5T442 439 aaPredicted RBP5.3□□□□□ -1.56
RGPD6-206ENST00000459645 FOXD4L5Q5VV16 416 aaPredicted RBP5.3□□□□□ -1.56
RGPD6-206ENST00000459645 NLRP10Q86W26 655 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 KIAA0825Q8IV33 1275 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 NME8Q8N427 588 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 MNS1Q8NEH6 495 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 PXYLP1Q8TE99 480 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 FOXD4L4Q8WXT5 416 aaPredicted RBP5.3□□□□□ -1.56
RGPD6-206ENST00000459645 DDRGK1Q96HY6 314 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 SPATA32Q96LK8 384 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 PHOX2BQ99453 314 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 LBHD1Q9BQE6 289 aaPredicted RBP5.3□□□□□ -1.56
RGPD6-206ENST00000459645 MIS18AQ9NYP9 233 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 TRMT112Q9UI30 125 aaKnown RBP5.3□□□□□ -1.56
RGPD6-206ENST00000459645 GGA1Q9UJY5 639 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 COL1A1P02452 1464 aaPredicted RBP5.3□□□□□ -1.56
RGPD6-206ENST00000459645 TRANK1O15050 2925 aa5.3□□□□□ -1.56
RGPD6-206ENST00000459645 ZNF804BA4D1E1 1349 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 SH3TC1Q8TE82 1336 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 APBB1O00213 710 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 PDHXO00330 501 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 IRF6O14896 467 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 KIF1CO43896 1103 aaKnown RBP5.29□□□□□ -1.56
RGPD6-206ENST00000459645 BCRP11274 1271 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 RPS8P62241 208 aaKnown RBP5.29□□□□□ -1.56
RGPD6-206ENST00000459645 PDE3AQ14432 1141 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 RASA3Q14644 834 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 KRBA2Q6ZNG9 492 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 MCM10Q7L590 875 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 FAM9BQ8IZU0 186 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 SGSM3Q96HU1 749 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 THUMPD2Q9BTF0 503 aaKnown RBP5.29□□□□□ -1.56
RGPD6-206ENST00000459645 VEZTQ9HBM0 779 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 ZCCHC17Q9NP64 241 aaKnown RBP5.29□□□□□ -1.56
RGPD6-206ENST00000459645 OGDHLQ9ULD0 1010 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 PPP2R3BQ9Y5P8 575 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 SNCAIPQ9Y6H5 919 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 CFAP47Q6ZTR5 3102 aa5.29□□□□□ -1.56
RGPD6-206ENST00000459645 SIPA1L3O60292 1781 aaPredicted RBP5.29□□□□□ -1.56
RGPD6-206ENST00000459645 DDX60Q8IY21 1712 aaKnown RBP5.28□□□□□ -1.56
RGPD6-206ENST00000459645 SPDYE5A6NIY4 337 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 U2AF1L5P0DN76 240 aaPredicted RBP5.28□□□□□ -1.56
RGPD6-206ENST00000459645 CYP2C8P10632 490 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 MAP3K9P80192 1104 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 U2AF1Q01081 240 aaKnown RBP eCLIP5.28□□□□□ -1.56
RGPD6-206ENST00000459645 LMOD3Q0VAK6 560 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 SNAPC2Q13487 334 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 IRF5Q13568 498 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 ADGRE1Q14246 886 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 SF3B3Q15393 1217 aaKnown RBP5.28□□□□□ -1.56
RGPD6-206ENST00000459645 DLGAP5Q15398 846 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 ZRSR2Q15696 482 aaKnown RBP5.28□□□□□ -1.56
RGPD6-206ENST00000459645 NEUROD2Q15784 382 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 AKNAD1Q5T1N1 836 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 L1TD1Q5T7N2 865 aaKnown RBP5.28□□□□□ -1.56
RGPD6-206ENST00000459645 STRIP1Q5VSL9 837 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 LRP10Q7Z4F1 713 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 MORC1Q86VD1 984 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 PLCD3Q8N3E9 789 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 MTMR14Q8NCE2 650 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.28□□□□□ -1.56
RGPD6-206ENST00000459645 GAS2L2Q8NHY3 880 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 ITFG2Q969R8 447 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 PHACTR3Q96KR7 559 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 FBXL18Q96ME1 805 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 PRDM12Q9H4Q4 367 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 ZNF576Q9H609 170 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 SEC31BQ9NQW1 1179 aa5.28□□□□□ -1.56
RGPD6-206ENST00000459645 FOXD4L1Q9NU39 408 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms