RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 USP17L12C9JPN9 530 aa28.81■■■□□ 2.2
U2AF1-204ENST00000459639 USP17L21D6R901 530 aa28.81■■■□□ 2.2
U2AF1-204ENST00000459639 KLHL34Q8N239 644 aa28.81■■■□□ 2.2
U2AF1-204ENST00000459639 EVCP57679 992 aa28.8■■■□□ 2.2
U2AF1-204ENST00000459639 RHBDL3P58872 404 aa28.8■■■□□ 2.2
U2AF1-204ENST00000459639 NUCB2P80303 420 aa28.8■■■□□ 2.2
U2AF1-204ENST00000459639 HHIPL2Q6UWX4 724 aa28.8■■■□□ 2.2
U2AF1-204ENST00000459639 CYB5R4Q7L1T6 521 aa28.8■■■□□ 2.2
U2AF1-204ENST00000459639 MYH1P12882 1939 aa28.8■■■□□ 2.2
U2AF1-204ENST00000459639 F8W031 263 aaPredicted RBP28.8■■■□□ 2.2
U2AF1-204ENST00000459639 RAB3GAP1Q15042 981 aa28.8■■■□□ 2.2
U2AF1-204ENST00000459639 LARGE2Q8N3Y3 721 aa28.8■■■□□ 2.2
U2AF1-204ENST00000459639 TMEM87BQ96K49 555 aa28.8■■■□□ 2.2
U2AF1-204ENST00000459639 MRIQ9BWK5 157 aa28.8■■■□□ 2.2
U2AF1-204ENST00000459639 ZNF277Q9NRM2 450 aaPredicted RBP28.8■■■□□ 2.2
U2AF1-204ENST00000459639 COL4A5P29400 1685 aa28.79■■■□□ 2.2
U2AF1-204ENST00000459639 YDJCA8MPS7 323 aa28.79■■■□□ 2.2
U2AF1-204ENST00000459639 APOBRQ0VD83 1088 aa28.79■■■□□ 2.2
U2AF1-204ENST00000459639 TEX11Q8IYF3 940 aa28.79■■■□□ 2.2
U2AF1-204ENST00000459639 NECAB1Q8N987 351 aa28.79■■■□□ 2.2
U2AF1-204ENST00000459639 TEKT1Q969V4 418 aa28.79■■■□□ 2.2
U2AF1-204ENST00000459639 FGRP09769 529 aa28.78■■■□□ 2.2
U2AF1-204ENST00000459639 HDLBPQ00341 1268 aaKnown RBP28.78■■■□□ 2.2
U2AF1-204ENST00000459639 GTF3C6Q969F1 213 aa28.78■■■□□ 2.2
U2AF1-204ENST00000459639 ZNF274Q96GC6 653 aaPredicted RBP28.78■■■□□ 2.2
U2AF1-204ENST00000459639 MTA3Q9BTC8 594 aa28.78■■■□□ 2.2
U2AF1-204ENST00000459639 INCENPQ9NQS7 918 aa28.78■■■□□ 2.2
U2AF1-204ENST00000459639 MCM9Q9NXL9 1143 aa28.78■■■□□ 2.2
U2AF1-204ENST00000459639 CYP2D7A0A087X1C5 515 aa28.77■■■□□ 2.2
U2AF1-204ENST00000459639 KDM4AO75164 1064 aa28.77■■■□□ 2.2
U2AF1-204ENST00000459639 SLC3A2P08195 630 aaKnown RBP28.77■■■□□ 2.2
U2AF1-204ENST00000459639 NKX2-3Q8TAU0 364 aa28.77■■■□□ 2.2
U2AF1-204ENST00000459639 TGFBRAP1Q8WUH2 860 aa28.77■■■□□ 2.2
U2AF1-204ENST00000459639 SPON1Q9HCB6 807 aa28.77■■■□□ 2.2
U2AF1-204ENST00000459639 SMC3Q9UQE7 1217 aa28.77■■■□□ 2.2
U2AF1-204ENST00000459639 ROBO3Q96MS0 1386 aa28.77■■■□□ 2.2
U2AF1-204ENST00000459639 PFKFB2O60825 505 aa28.77■■■□□ 2.2
U2AF1-204ENST00000459639 IARSP41252 1262 aaKnown RBP28.77■■■□□ 2.2
U2AF1-204ENST00000459639 AMOTL1Q8IY63 956 aa28.77■■■□□ 2.2
U2AF1-204ENST00000459639 TOMM22Q9NS69 142 aa28.77■■■□□ 2.2
U2AF1-204ENST00000459639 ZSWIM5Q9P217 1185 aa28.77■■■□□ 2.2
U2AF1-204ENST00000459639 ANGEL1Q9UNK9 670 aaKnown RBP28.77■■■□□ 2.2
U2AF1-204ENST00000459639 SH2B2O14492 632 aaPredicted RBP28.76■■■□□ 2.19
U2AF1-204ENST00000459639 ESR2Q92731 530 aa28.76■■■□□ 2.19
U2AF1-204ENST00000459639 TAOK3Q9H2K8 898 aa28.76■■■□□ 2.19
U2AF1-204ENST00000459639 SCNN1DP51172 638 aa28.75■■■□□ 2.19
U2AF1-204ENST00000459639 STK3Q13188 491 aa28.75■■■□□ 2.19
U2AF1-204ENST00000459639 RRP12Q5JTH9 1297 aaKnown RBP28.75■■■□□ 2.19
U2AF1-204ENST00000459639 C12orf60Q5U649 245 aa28.75■■■□□ 2.19
U2AF1-204ENST00000459639 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.75■■■□□ 2.19
U2AF1-204ENST00000459639 MYO3BQ8WXR4 1341 aa28.75■■■□□ 2.19
U2AF1-204ENST00000459639 USP17L8P0C7I0 530 aa28.74■■■□□ 2.19
U2AF1-204ENST00000459639 CRKP46108 304 aa28.74■■■□□ 2.19
U2AF1-204ENST00000459639 KIAA0825Q8IV33 1275 aa28.74■■■□□ 2.19
U2AF1-204ENST00000459639 MAPKAPK5Q8IW41 473 aa28.74■■■□□ 2.19
U2AF1-204ENST00000459639 CHMP4CQ96CF2 233 aa28.74■■■□□ 2.19
U2AF1-204ENST00000459639 ZDHHC15Q96MV8 337 aa28.74■■■□□ 2.19
U2AF1-204ENST00000459639 GPHNQ9NQX3 736 aaPredicted RBP28.74■■■□□ 2.19
U2AF1-204ENST00000459639 FLT1P17948 1338 aa28.74■■■□□ 2.19
U2AF1-204ENST00000459639 ORC4O43929 436 aa28.74■■■□□ 2.19
U2AF1-204ENST00000459639 CYP2D6P10635 497 aa28.74■■■□□ 2.19
U2AF1-204ENST00000459639 NT5C2P49902 561 aa28.74■■■□□ 2.19
U2AF1-204ENST00000459639 NIM1KQ8IY84 436 aa28.74■■■□□ 2.19
U2AF1-204ENST00000459639 IGDCC4Q8TDY8 1250 aa28.74■■■□□ 2.19
U2AF1-204ENST00000459639 BCS1LQ9Y276 419 aa28.74■■■□□ 2.19
U2AF1-204ENST00000459639 SMIM22K7EJ46 135 aa28.73■■■□□ 2.19
U2AF1-204ENST00000459639 PDIA3P30101 505 aaKnown RBP28.73■■■□□ 2.19
U2AF1-204ENST00000459639 STK11IPQ8N1F8 1099 aa28.73■■■□□ 2.19
U2AF1-204ENST00000459639 SERPINA10Q9UK55 444 aa28.73■■■□□ 2.19
U2AF1-204ENST00000459639 LTBP3Q9NS15 1303 aa28.72■■■□□ 2.19
U2AF1-204ENST00000459639 SCRN1Q12765 414 aa28.72■■■□□ 2.19
U2AF1-204ENST00000459639 SART3Q15020 963 aaKnown RBP28.72■■■□□ 2.19
U2AF1-204ENST00000459639 ZNRF3Q9ULT6 936 aa28.72■■■□□ 2.19
U2AF1-204ENST00000459639 KLF18A0A0U1RQI7 1052 aa28.71■■■□□ 2.19
U2AF1-204ENST00000459639 LIFRP42702 1097 aa28.71■■■□□ 2.19
U2AF1-204ENST00000459639 PDE4BQ07343 736 aa28.71■■■□□ 2.19
U2AF1-204ENST00000459639 TMEM67Q5HYA8 995 aa28.71■■■□□ 2.19
U2AF1-204ENST00000459639 SGMS1Q86VZ5 419 aa28.71■■■□□ 2.19
U2AF1-204ENST00000459639 IFIT3O14879 490 aaKnown RBP28.7■■■□□ 2.19
U2AF1-204ENST00000459639 GJB2P29033 226 aa28.7■■■□□ 2.19
U2AF1-204ENST00000459639 NFKBIBQ15653 356 aa28.7■■■□□ 2.19
U2AF1-204ENST00000459639 APOBEC3HQ6NTF7 200 aaKnown RBP28.7■■■□□ 2.19
U2AF1-204ENST00000459639 RSBN1LQ6PCB5 846 aaPredicted RBP28.7■■■□□ 2.19
U2AF1-204ENST00000459639 NLGN2Q8NFZ4 835 aa28.7■■■□□ 2.19
U2AF1-204ENST00000459639 TNPO1Q92973 898 aaKnown RBP28.7■■■□□ 2.19
U2AF1-204ENST00000459639 LLPHQ9BRT6 129 aaKnown RBP28.7■■■□□ 2.19
U2AF1-204ENST00000459639 LY9Q9HBG7 655 aa28.7■■■□□ 2.19
U2AF1-204ENST00000459639 BRPF3Q9ULD4 1205 aa28.7■■■□□ 2.19
U2AF1-204ENST00000459639 NFKBIEO00221 500 aa28.7■■■□□ 2.18
U2AF1-204ENST00000459639 VIL1P09327 827 aaKnown RBP28.7■■■□□ 2.18
U2AF1-204ENST00000459639 POLR3DP05423 398 aaPredicted RBP28.69■■■□□ 2.18
U2AF1-204ENST00000459639 EVX2Q03828 476 aa28.69■■■□□ 2.18
U2AF1-204ENST00000459639 PKP1Q13835 747 aa28.69■■■□□ 2.18
U2AF1-204ENST00000459639 CDC42EP5Q6NZY7 148 aa28.69■■■□□ 2.18
U2AF1-204ENST00000459639 USP40Q9NVE5 1235 aa28.69■■■□□ 2.18
U2AF1-204ENST00000459639 NAP1L2Q9ULW6 460 aaPredicted RBP28.69■■■□□ 2.18
U2AF1-204ENST00000459639 ERICH2A1L162 156 aa28.68■■■□□ 2.18
U2AF1-204ENST00000459639 GOLGA8BA8MQT2 603 aa28.68■■■□□ 2.18
U2AF1-204ENST00000459639 UBAC1Q9BSL1 405 aa28.68■■■□□ 2.18
U2AF1-204ENST00000459639 PSMD14O00487 310 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms