RNA–Protein interactions for RNA: ENST00000458258.5

PTBP3-207, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene PTBP3, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-207ENST00000458258 CYTH3O43739 400 aa6.72□□□□□ -1.33
PTBP3-207ENST00000458258 TOB1P50616 345 aaPredicted RBP6.72□□□□□ -1.33
PTBP3-207ENST00000458258 TDRD7Q8NHU6 1098 aaKnown RBP6.72□□□□□ -1.33
PTBP3-207ENST00000458258 PP2D1A8MPX8 630 aa6.71□□□□□ -1.33
PTBP3-207ENST00000458258 TDO2P48775 406 aa6.71□□□□□ -1.33
PTBP3-207ENST00000458258 PKN1Q16512 942 aa6.71□□□□□ -1.33
PTBP3-207ENST00000458258 GPATCH3Q96I76 525 aa6.71□□□□□ -1.33
PTBP3-207ENST00000458258 GRPEL1Q9HAV7 217 aa6.71□□□□□ -1.33
PTBP3-207ENST00000458258 VPS54Q9P1Q0 977 aa6.71□□□□□ -1.33
PTBP3-207ENST00000458258 RXRBP28702 533 aa6.71□□□□□ -1.33
PTBP3-207ENST00000458258 R3HDM1Q15032 1099 aaKnown RBP6.71□□□□□ -1.33
PTBP3-207ENST00000458258 UBE3CQ15386 1083 aa6.71□□□□□ -1.33
PTBP3-207ENST00000458258 DOT1LQ8TEK3 1739 aa6.71□□□□□ -1.33
PTBP3-207ENST00000458258 RBM6P78332 1123 aaKnown RBP6.71□□□□□ -1.34
PTBP3-207ENST00000458258 AOC3Q16853 763 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 TTBK2Q6IQ55 1244 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 NAA16Q6N069 864 aaPredicted RBP6.71□□□□□ -1.34
PTBP3-207ENST00000458258 EEF2KMTQ96G04 330 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 ZNF277Q9NRM2 450 aaPredicted RBP6.71□□□□□ -1.34
PTBP3-207ENST00000458258 CLRN2A0PK11 232 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 RC3H1Q5TC82 1133 aaKnown RBP6.71□□□□□ -1.34
PTBP3-207ENST00000458258 LUZP1Q86V48 1076 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 RTFDC1Q9BY42 306 aaPredicted RBP6.71□□□□□ -1.34
PTBP3-207ENST00000458258 USP25Q9UHP3 1055 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 NRBP1Q9UHY1 535 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 AKAP2Q9Y2D5 859 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 DAGLAQ9Y4D2 1042 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 SCN11AQ9UI33 1791 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 PATL2C9JE40 543 aaKnown RBP6.71□□□□□ -1.34
PTBP3-207ENST00000458258 KCTD19Q17RG1 926 aaPredicted RBP6.71□□□□□ -1.34
PTBP3-207ENST00000458258 CRY2Q49AN0 593 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 SRBD1Q8N5C6 995 aaKnown RBP6.71□□□□□ -1.34
PTBP3-207ENST00000458258 MROH5Q6ZUA9 1318 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 RAD17O75943 681 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 UBE4AQ14139 1066 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 KRT40Q6A162 431 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 LEO1Q8WVC0 666 aaPredicted RBP6.71□□□□□ -1.34
PTBP3-207ENST00000458258 NUP88Q99567 741 aaPredicted RBP6.71□□□□□ -1.34
PTBP3-207ENST00000458258 MROH7-TTC4A0A0A0MT08 1334 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 SLC16A2P36021 539 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 FUT2Q10981 343 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 SLC15A2Q16348 729 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 C11orf57Q6ZUT1 292 aaPredicted RBP6.71□□□□□ -1.34
PTBP3-207ENST00000458258 SLC26A6Q9BXS9 759 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 MCM9Q9NXL9 1143 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 PCDHB6Q9Y5E3 794 aa6.71□□□□□ -1.34
PTBP3-207ENST00000458258 COL4A5P29400 1685 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 FAM170AA1A519 330 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 IFIT3O14879 490 aaKnown RBP6.7□□□□□ -1.34
PTBP3-207ENST00000458258 DPEP1P16444 411 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 NAPBQ9H115 298 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 V9GY48 417 aaPredicted RBP6.7□□□□□ -1.34
PTBP3-207ENST00000458258 BTDP43251 543 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 KLHL40Q2TBA0 621 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 PLIN2Q99541 437 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 KIAA1755Q5JYT7 1200 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 AKNAD1Q5T1N1 836 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 VPS37DQ86XT2 251 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 FUCA2Q9BTY2 467 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 TDRD3Q9H7E2 651 aaKnown RBP6.7□□□□□ -1.34
PTBP3-207ENST00000458258 VAT1LQ9HCJ6 419 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 AKR1B1P15121 316 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 PLCB2Q00722 1185 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 PDILTQ8N807 584 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 TAF1P21675 1872 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 MAGEB6P1A0A0J9YX57 407 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 SIAH1Q8IUQ4 282 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 PRMT6Q96LA8 375 aaPredicted RBP6.7□□□□□ -1.34
PTBP3-207ENST00000458258 ABCC6O95255 1503 aa6.7□□□□□ -1.34
PTBP3-207ENST00000458258 MCCP23508 829 aa6.69□□□□□ -1.34
PTBP3-207ENST00000458258 KIF23Q02241 960 aaPredicted RBP6.69□□□□□ -1.34
PTBP3-207ENST00000458258 TMEM67Q5HYA8 995 aa6.69□□□□□ -1.34
PTBP3-207ENST00000458258 MFSD14BQ5SR56 506 aa6.69□□□□□ -1.34
PTBP3-207ENST00000458258 SAMD1Q6SPF0 538 aaPredicted RBP6.69□□□□□ -1.34
PTBP3-207ENST00000458258 PCDHA7Q9UN72 937 aa6.69□□□□□ -1.34
PTBP3-207ENST00000458258 TFAP4Q01664 338 aa6.69□□□□□ -1.34
PTBP3-207ENST00000458258 TROAPQ12815 778 aa6.69□□□□□ -1.34
PTBP3-207ENST00000458258 USP17L2Q6R6M4 530 aa6.69□□□□□ -1.34
PTBP3-207ENST00000458258 CLEC17AQ6ZS10 378 aa6.69□□□□□ -1.34
PTBP3-207ENST00000458258 PARP4Q9UKK3 1724 aaKnown RBP6.69□□□□□ -1.34
PTBP3-207ENST00000458258 COL14A1Q05707 1796 aaKnown RBP6.69□□□□□ -1.34
PTBP3-207ENST00000458258 GDF11O95390 407 aa6.69□□□□□ -1.34
PTBP3-207ENST00000458258 TBC1D5Q92609 795 aa6.69□□□□□ -1.34
PTBP3-207ENST00000458258 CDC5LQ99459 802 aaKnown RBP6.69□□□□□ -1.34
PTBP3-207ENST00000458258 CIZ1Q9ULV3 898 aaPredicted RBP6.69□□□□□ -1.34
PTBP3-207ENST00000458258 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.69□□□□□ -1.342e-6■■■■□ 20.5
PTBP3-207ENST00000458258 CICQ96RK0 1608 aaPredicted RBP6.69□□□□□ -1.34
PTBP3-207ENST00000458258 NRAPQ86VF7 1730 aa6.69□□□□□ -1.34
PTBP3-207ENST00000458258 RASA1P20936 1047 aa6.69□□□□□ -1.34
PTBP3-207ENST00000458258 IMMTQ16891 758 aaKnown RBP6.69□□□□□ -1.34
PTBP3-207ENST00000458258 AXDND1Q5T1B0 1012 aaPredicted RBP6.69□□□□□ -1.34
PTBP3-207ENST00000458258 A0A1W2PRG0 241 aa6.68□□□□□ -1.34
PTBP3-207ENST00000458258 PRR29P0C7W0 189 aa6.68□□□□□ -1.34
PTBP3-207ENST00000458258 RBM26Q5T8P6 1007 aaKnown RBP6.68□□□□□ -1.34
PTBP3-207ENST00000458258 INTS4Q96HW7 963 aaKnown RBP6.68□□□□□ -1.34
PTBP3-207ENST00000458258 TMEM260Q9NX78 707 aa6.68□□□□□ -1.34
PTBP3-207ENST00000458258 PDE4BQ07343 736 aa6.68□□□□□ -1.34
PTBP3-207ENST00000458258 MAP3K12Q12852 859 aa6.68□□□□□ -1.34
PTBP3-207ENST00000458258 DPYDQ12882 1025 aa6.68□□□□□ -1.34
PTBP3-207ENST00000458258 C7orf43Q8WVR3 580 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms