RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 IFIT3O14879 490 aaKnown RBP12.65□□□□□ -0.38
RFX3-211ENST00000458034 MYO1BO43795 1136 aa12.65□□□□□ -0.38
RFX3-211ENST00000458034 CUTAO60888 179 aa12.65□□□□□ -0.38
RFX3-211ENST00000458034 ZNF202O95125 648 aa12.65□□□□□ -0.38
RFX3-211ENST00000458034 MBD4O95243 580 aa12.65□□□□□ -0.38
RFX3-211ENST00000458034 RCAN1P53805 252 aa12.65□□□□□ -0.38
RFX3-211ENST00000458034 EIF5P55010 431 aaKnown RBP12.65□□□□□ -0.38
RFX3-211ENST00000458034 TPD52L1Q16890 204 aaPredicted RBP12.65□□□□□ -0.38
RFX3-211ENST00000458034 KRT40Q6A162 431 aa12.65□□□□□ -0.38
RFX3-211ENST00000458034 OTUD7BQ6GQQ9 843 aa12.65□□□□□ -0.38
RFX3-211ENST00000458034 IFNL3Q8IZI9 196 aa12.65□□□□□ -0.38
RFX3-211ENST00000458034 TMTC2Q8N394 836 aa12.65□□□□□ -0.38
RFX3-211ENST00000458034 MAGEB6Q8N7X4 407 aa12.65□□□□□ -0.38
RFX3-211ENST00000458034 CCDC150Q8NCX0 1101 aa12.65□□□□□ -0.38
RFX3-211ENST00000458034 SLC4A9Q96Q91 983 aa12.65□□□□□ -0.38
RFX3-211ENST00000458034 CDC5LQ99459 802 aaKnown RBP12.65□□□□□ -0.38
RFX3-211ENST00000458034 NOL10Q9BSC4 688 aaKnown RBP12.65□□□□□ -0.38
RFX3-211ENST00000458034 NBPF3Q9H094 633 aa12.65□□□□□ -0.38
RFX3-211ENST00000458034 LY9Q9HBG7 655 aa12.65□□□□□ -0.38
RFX3-211ENST00000458034 HOOK1Q9UJC3 728 aaKnown RBP12.65□□□□□ -0.38
RFX3-211ENST00000458034 THRAP3Q9Y2W1 955 aaKnown RBP12.65□□□□□ -0.38
RFX3-211ENST00000458034 SLC12A7Q9Y666 1083 aa12.65□□□□□ -0.38
RFX3-211ENST00000458034 A0A1B0GUL6 1792 aa12.65□□□□□ -0.38
RFX3-211ENST00000458034 FAM237AA0A1B0GTK4 181 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 CCDC196A0A1B0GTZ2 297 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 KIF28PB7ZC32 967 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 FMNL1O95466 1100 aaPredicted RBP12.64□□□□□ -0.39
RFX3-211ENST00000458034 PFKFB1P16118 471 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 SYKP43405 635 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 TDO2P48775 406 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 SYCP1Q15431 976 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 AKNAD1Q5T1N1 836 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 MFSD6Q6ZSS7 791 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 MICU3Q86XE3 530 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 VPS37DQ86XT2 251 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 RAB11FIP4Q86YS3 637 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 LRRC8AQ8IWT6 810 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 TRIM22Q8IYM9 498 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 IGDCC4Q8TDY8 1250 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 CACTINQ8WUQ7 758 aaKnown RBP12.64□□□□□ -0.39
RFX3-211ENST00000458034 STAG1Q8WVM7 1258 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 NRBP1Q9UHY1 535 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 ZNF652Q9Y2D9 606 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 ROBO1Q9Y6N7 1651 aa12.64□□□□□ -0.39
RFX3-211ENST00000458034 NEDD4P46934 1319 aa12.63□□□□□ -0.39
RFX3-211ENST00000458034 POTEMA6NI47 508 aa12.63□□□□□ -0.39
RFX3-211ENST00000458034 RIOK3O14730 519 aaKnown RBP12.63□□□□□ -0.39
RFX3-211ENST00000458034 IKBKBO14920 756 aa12.63□□□□□ -0.39
RFX3-211ENST00000458034 CBFA2T2O43439 604 aa12.63□□□□□ -0.39
RFX3-211ENST00000458034 PPFIA3O75145 1194 aa12.63□□□□□ -0.39
RFX3-211ENST00000458034 TNNT1P13805 278 aa12.63□□□□□ -0.39
RFX3-211ENST00000458034 LRMPQ12912 555 aa12.63□□□□□ -0.39
RFX3-211ENST00000458034 AXDND1Q5T1B0 1012 aaPredicted RBP12.63□□□□□ -0.39
RFX3-211ENST00000458034 SUSD4Q5VX71 490 aa12.63□□□□□ -0.39
RFX3-211ENST00000458034 ELOA2Q8IYF1 753 aaPredicted RBP12.63□□□□□ -0.39
RFX3-211ENST00000458034 OSBPL5Q9H0X9 879 aaPredicted RBP12.63□□□□□ -0.39
RFX3-211ENST00000458034 GNL3LQ9NVN8 582 aaKnown RBP12.63□□□□□ -0.39
RFX3-211ENST00000458034 ZNF831Q5JPB2 1677 aa12.63□□□□□ -0.39
RFX3-211ENST00000458034 IFNAR1P17181 557 aa12.62□□□□□ -0.39
RFX3-211ENST00000458034 U2AF2P26368 475 aaKnown RBP eCLIP12.62□□□□□ -0.39
RFX3-211ENST00000458034 RASGRF1Q13972 1273 aa12.62□□□□□ -0.39
RFX3-211ENST00000458034 WTAPQ15007 396 aa12.62□□□□□ -0.39
RFX3-211ENST00000458034 PPP2R5BQ15173 497 aa12.62□□□□□ -0.39
RFX3-211ENST00000458034 RTN1Q16799 776 aa12.62□□□□□ -0.39
RFX3-211ENST00000458034 CCDC144BQ3MJ40 725 aa12.62□□□□□ -0.39
RFX3-211ENST00000458034 OLFM4Q6UX06 510 aa12.62□□□□□ -0.39
RFX3-211ENST00000458034 CCDC144CPQ8IYA2 1237 aa12.62□□□□□ -0.39
RFX3-211ENST00000458034 SMARCC1Q92922 1105 aaPredicted RBP12.62□□□□□ -0.39
RFX3-211ENST00000458034 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.62□□□□□ -0.39
RFX3-211ENST00000458034 SLC26A6Q9BXS9 759 aa12.62□□□□□ -0.39
RFX3-211ENST00000458034 ARMT1Q9H993 441 aa12.62□□□□□ -0.39
RFX3-211ENST00000458034 KCND1Q9NSA2 647 aa12.62□□□□□ -0.39
RFX3-211ENST00000458034 CEP131Q9UPN4 1083 aa12.62□□□□□ -0.39
RFX3-211ENST00000458034 SLC4A4Q9Y6R1 1079 aa12.62□□□□□ -0.39
RFX3-211ENST00000458034 MYH13Q9UKX3 1938 aa12.62□□□□□ -0.39
RFX3-211ENST00000458034 COL5A3P25940 1745 aaPredicted RBP12.62□□□□□ -0.39
RFX3-211ENST00000458034 SLIT2O94813 1529 aa12.62□□□□□ -0.39
RFX3-211ENST00000458034 CASZ1Q86V15 1759 aa12.61□□□□□ -0.39
RFX3-211ENST00000458034 DLEC1Q9Y238 1755 aa12.61□□□□□ -0.39
RFX3-211ENST00000458034 CCP110O43303 1012 aa12.61□□□□□ -0.39
RFX3-211ENST00000458034 SMC2O95347 1197 aa12.61□□□□□ -0.39
RFX3-211ENST00000458034 TUBB4AP04350 444 aa12.61□□□□□ -0.39
RFX3-211ENST00000458034 CDC27P30260 824 aa12.61□□□□□ -0.39
RFX3-211ENST00000458034 NTRK3Q16288 839 aa12.61□□□□□ -0.39
RFX3-211ENST00000458034 RESP18Q5W5W9 173 aa12.61□□□□□ -0.39
RFX3-211ENST00000458034 INTS5Q6P9B9 1019 aaKnown RBP12.61□□□□□ -0.39
RFX3-211ENST00000458034 HELBQ8NG08 1087 aaPredicted RBP12.61□□□□□ -0.39
RFX3-211ENST00000458034 CCDC34Q96HJ3 373 aa12.61□□□□□ -0.39
RFX3-211ENST00000458034 EPB41L4AQ9HCS5 686 aaPredicted RBP12.61□□□□□ -0.39
RFX3-211ENST00000458034 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.61□□□□□ -0.39
RFX3-211ENST00000458034 HPSEQ9Y251 543 aa12.61□□□□□ -0.39
RFX3-211ENST00000458034 GSG1L2A8MUP6 293 aa12.6□□□□□ -0.39
RFX3-211ENST00000458034 CTIFO43310 598 aaKnown RBP12.6□□□□□ -0.39
RFX3-211ENST00000458034 CAMTA2O94983 1202 aa12.6□□□□□ -0.39
RFX3-211ENST00000458034 DEXIO95424 95 aa12.6□□□□□ -0.39
RFX3-211ENST00000458034 SKILP12757 684 aa12.6□□□□□ -0.39
RFX3-211ENST00000458034 XBP1P17861 261 aa12.6□□□□□ -0.39
RFX3-211ENST00000458034 ATP6V1AP38606 617 aa12.6□□□□□ -0.39
RFX3-211ENST00000458034 CRKLP46109 303 aaKnown RBP12.6□□□□□ -0.39
RFX3-211ENST00000458034 KCNJ6P48051 423 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms