RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 USP17L4A6NCW7 530 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 GSG1L2A8MUP6 293 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 SNPHO15079 494 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 HSP90AA1P07900 732 aaKnown RBP10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 RPS6KB1P23443 525 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 TDO2P48775 406 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 TRDNQ13061 729 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 USP17L1Q7RTZ2 530 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 ADGRA1Q86SQ6 560 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 IFNL3Q8IZI9 196 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 MIGA1Q8NAN2 632 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 ZNF384Q8TF68 577 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 INTS4Q96HW7 963 aaKnown RBP10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 MTA3Q9BTC8 594 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 TMEM121BQ9BXQ6 578 aaPredicted RBP10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 UPF3BQ9BZI7 483 aaKnown RBP10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 TAOK3Q9H2K8 898 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 PDRG1Q9NUG6 133 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 ARPP21Q9UBL0 812 aaPredicted RBP10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 ANAPC4Q9UJX5 808 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 TAOK2Q9UL54 1235 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 CIZ1Q9ULV3 898 aaPredicted RBP10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 E7EWF7 191 aa10.56□□□□□ -0.72
CDC42EP3-204ENST00000457889 SLC3A2P08195 630 aaKnown RBP10.56□□□□□ -0.72
CDC42EP3-204ENST00000457889 ADCK5Q3MIX3 580 aa10.56□□□□□ -0.72
CDC42EP3-204ENST00000457889 HHIPL2Q6UWX4 724 aa10.56□□□□□ -0.72
CDC42EP3-204ENST00000457889 DHX32Q7L7V1 743 aaKnown RBP10.56□□□□□ -0.72
CDC42EP3-204ENST00000457889 RALYLQ86SE5 291 aaKnown RBP10.56□□□□□ -0.72
CDC42EP3-204ENST00000457889 SPNS2Q8IVW8 549 aa10.56□□□□□ -0.72
CDC42EP3-204ENST00000457889 AMOTL1Q8IY63 956 aa10.56□□□□□ -0.72
CDC42EP3-204ENST00000457889 NCOA7Q8NI08 942 aa10.56□□□□□ -0.72
CDC42EP3-204ENST00000457889 KRT23Q9C075 422 aa10.56□□□□□ -0.72
CDC42EP3-204ENST00000457889 CWC22Q9HCG8 908 aaKnown RBP10.56□□□□□ -0.72
CDC42EP3-204ENST00000457889 EPB41L4AQ9HCS5 686 aaPredicted RBP10.56□□□□□ -0.72
CDC42EP3-204ENST00000457889 LIMCH1Q9UPQ0 1083 aa10.56□□□□□ -0.72
CDC42EP3-204ENST00000457889 PSME4Q14997 1843 aa10.56□□□□□ -0.72
CDC42EP3-204ENST00000457889 ARFGEF1Q9Y6D6 1849 aa10.56□□□□□ -0.72
CDC42EP3-204ENST00000457889 CHD4Q14839 1912 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 POTEB3A0JP26 581 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 CD2BP2O95400 341 aaKnown RBP10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 MCM5P33992 734 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 MMRN1Q13201 1228 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 CUL4AQ13619 759 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 AOC3Q16853 763 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 DOK7Q18PE1 504 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 SBK1Q52WX2 424 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 DACT2Q5SW24 774 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 POTEBQ6S5H4 581 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 NIM1KQ8IY84 436 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 LARGE2Q8N3Y3 721 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 STAG1Q8WVM7 1258 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 TEKT1Q969V4 418 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 AGXT2Q9BYV1 514 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 AATFQ9NY61 560 aaKnown RBP eCLIP10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 SERPINA10Q9UK55 444 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 FER1L6Q2WGJ9 1857 aa10.55□□□□□ -0.72
CDC42EP3-204ENST00000457889 MYH2Q9UKX2 1941 aa10.54□□□□□ -0.72
CDC42EP3-204ENST00000457889 PDIA4P13667 645 aaKnown RBP10.54□□□□□ -0.72
CDC42EP3-204ENST00000457889 IARSP41252 1262 aaKnown RBP10.54□□□□□ -0.72
CDC42EP3-204ENST00000457889 BTDP43251 543 aa10.54□□□□□ -0.72
CDC42EP3-204ENST00000457889 AK2P54819 239 aa10.54□□□□□ -0.72
CDC42EP3-204ENST00000457889 AKNAD1Q5T1N1 836 aa10.54□□□□□ -0.72
CDC42EP3-204ENST00000457889 TMX3Q96JJ7 454 aa10.54□□□□□ -0.72
CDC42EP3-204ENST00000457889 L3MBTL3Q96JM7 780 aaPredicted RBP10.54□□□□□ -0.72
CDC42EP3-204ENST00000457889 DBNDD1Q9H9R9 158 aa10.54□□□□□ -0.72
CDC42EP3-204ENST00000457889 DCP1AQ9NPI6 582 aaPredicted RBP10.54□□□□□ -0.72
CDC42EP3-204ENST00000457889 PPP1R1BQ9UD71 204 aaPredicted RBP10.54□□□□□ -0.72
CDC42EP3-204ENST00000457889 ZNRF3Q9ULT6 936 aa10.54□□□□□ -0.72
CDC42EP3-204ENST00000457889 TTF2Q9UNY4 1162 aaKnown RBP10.54□□□□□ -0.72
CDC42EP3-204ENST00000457889 JAG2Q9Y219 1238 aa10.54□□□□□ -0.72
CDC42EP3-204ENST00000457889 ROBO3Q96MS0 1386 aa10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 FGD1P98174 961 aa10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 EXOSC10Q01780 885 aaKnown RBP10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 PPARAQ07869 468 aa10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 SART3Q15020 963 aaKnown RBP10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 DIXDC1Q155Q3 683 aa10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 MFSD6Q6ZSS7 791 aa10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 STOX1Q6ZVD7 989 aa10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 MB21D2Q8IYB1 491 aaPredicted RBP10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 CERS5Q8N5B7 392 aa10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 JDP2Q8WYK2 163 aa10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 FBXW7Q969H0 707 aa10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 TMEM87BQ96K49 555 aa10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 ZDHHC15Q96MV8 337 aa10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 ZNF287Q9HBT7 754 aa10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 MKRN1Q9UHC7 482 aaKnown RBP10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 DAGLAQ9Y4D2 1042 aa10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.53□□□□□ -0.72
CDC42EP3-204ENST00000457889 LAMB1P07942 1786 aa10.52□□□□□ -0.72
CDC42EP3-204ENST00000457889 SCN9AQ15858 1988 aa10.52□□□□□ -0.72
CDC42EP3-204ENST00000457889 ZNF646O15015 1829 aaPredicted RBP10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 PRKAB2O43741 272 aa10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 VIL1P09327 827 aaKnown RBP10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 FGRP09769 529 aa10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 RPS12P25398 132 aaKnown RBP10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 USP5P45974 858 aa10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 EVCP57679 992 aa10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 HAND2P61296 217 aa10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 DYNLL1P63167 89 aaKnown RBP10.52□□□□□ -0.73
CDC42EP3-204ENST00000457889 PDAP1Q13442 181 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms