RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 DEXIO95424 95 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 FMNL1O95466 1100 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 A1BGP04217 495 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 TUBBP07437 444 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 CCDC175P0C221 793 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 CALM1P0DP23 149 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 CALM2P0DP24 149 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 CALM3P0DP25 149 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 PDE6AP16499 860 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 TRHP20396 242 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 ITGA6P23229 1130 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 ERCC5P28715 1186 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 ADD2P35612 726 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 TDO2P48775 406 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 PLCD1P51178 756 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 ANTXR2P58335 489 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 SPAG1Q07617 926 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 PNOCQ13519 176 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 COL9A3Q14050 684 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 TRIM14Q14142 442 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 ARID5BQ14865 1188 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 WTAPQ15007 396 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 POSTNQ15063 836 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 NKX1-1Q15270 411 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 PUM3Q15397 648 aaKnown RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 CHRNA2Q15822 529 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 KMT5BQ4FZB7 885 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 ARHGAP29Q52LW3 1261 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 AXDND1Q5T1B0 1012 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 NBPF14Q5TI25 921 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 E4F1Q66K89 784 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 SPECC1LQ69YQ0 1117 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 ARMCX5Q6P1M9 558 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 NBPF10Q6P3W6 841 aaKnown RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 FBXO38Q6PIJ6 1188 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 APOA5Q6Q788 366 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 LDHAL6AQ6ZMR3 332 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 MFSD6Q6ZSS7 791 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 NBPF11Q86T75 865 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 SGMS1Q86VZ5 419 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 NOSTRINQ8IVI9 506 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 TXLNBQ8N3L3 684 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 NBPF15Q8N660 670 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 CEP112Q8N8E3 955 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 ZNF579Q8NAF0 562 aaKnown RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 ENOX1Q8TC92 643 aaKnown RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 LPIN2Q92539 896 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 ERCC4Q92889 916 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 CCDC51Q96ER9 411 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 AK7Q96M32 723 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 BAG1Q99933 345 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 UBAC1Q9BSL1 405 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 PUS3Q9BZE2 481 aaKnown RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 FOXP1Q9H334 677 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 CWC15Q9P013 229 aaKnown RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 RAI14Q9P0K7 980 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 HPS5Q9UPZ3 1129 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 HPSEQ9Y251 543 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 PPP2R2CQ9Y2T4 447 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 V9GYY5 206 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 TIAM2Q8IVF5 1701 aa3.81□□□□□ -1.8
HMGN1P18-201ENST00000457642 RIC1Q4ADV7 1423 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 MYH3P11055 1940 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 CHD4Q14839 1912 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 UBN2Q6ZU65 1347 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 ZNF532Q9HCE3 1301 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 SYNRGQ9UMZ2 1314 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 TRIM75PA6NK02 468 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 B4E1Z4 1266 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 PATL2C9JE40 543 aaKnown RBP3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 AKR1B15C9JRZ8 316 aaPredicted RBP3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 IRS4O14654 1257 aaPredicted RBP3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 NPHP1O15259 732 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 PDE8AO60658 829 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 PPFIA3O75145 1194 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 MBD4O95243 580 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 MMP1P03956 469 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 CHGBP05060 677 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 CSF1RP07333 972 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 H2AFXP16104 143 aaPredicted RBP3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 IFNAR1P17181 557 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 MCM3P25205 808 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 ARID4AP29374 1257 aaPredicted RBP3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 ADORA1P30542 326 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 KRT2P35908 639 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 TXLNAP40222 546 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 MCAMP43121 646 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 CTSWP56202 376 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 EVA1CP58658 441 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 GNG11P61952 73 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 PPP2R3AQ06190 1150 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 NCAPHQ15003 741 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 BRD3Q15059 726 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 PTPAQ15257 358 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 TERF2Q15554 542 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 ERCC6LQ2NKX8 1250 aa3.8□□□□□ -1.8
HMGN1P18-201ENST00000457642 TSR1Q2NL82 804 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms