RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 SMCR8Q8TEV9 937 aaPredicted RBP29.07■■■□□ 2.24
PTPRA-208ENST00000455631 LRCH3Q96II8 777 aa29.07■■■□□ 2.24
PTPRA-208ENST00000455631 TAOK2Q9UL54 1235 aa29.07■■■□□ 2.24
PTPRA-208ENST00000455631 ALPK3Q96L96 1907 aa29.06■■■□□ 2.24
PTPRA-208ENST00000455631 ATRNL1Q5VV63 1379 aa29.06■■■□□ 2.24
PTPRA-208ENST00000455631 LDHBP07195 334 aaKnown RBP29.06■■■□□ 2.24
PTPRA-208ENST00000455631 PTPRAP18433 802 aa29.06■■■□□ 2.24
PTPRA-208ENST00000455631 STAP2Q9UGK3 403 aa29.06■■■□□ 2.24
PTPRA-208ENST00000455631 DOCK1Q14185 1865 aa29.06■■■□□ 2.24
PTPRA-208ENST00000455631 PHF20L1A8MW92 1017 aa29.05■■■□□ 2.24
PTPRA-208ENST00000455631 EYA2O00167 538 aa29.05■■■□□ 2.24
PTPRA-208ENST00000455631 IRF5Q13568 498 aa29.05■■■□□ 2.24
PTPRA-208ENST00000455631 PAK6Q9NQU5 681 aaPredicted RBP29.04■■■□□ 2.24
PTPRA-208ENST00000455631 SLC45A1Q9Y2W3 748 aa29.04■■■□□ 2.24
PTPRA-208ENST00000455631 AFG3L2Q9Y4W6 797 aa29.04■■■□□ 2.24
PTPRA-208ENST00000455631 MYH2Q9UKX2 1941 aa29.03■■■□□ 2.24
PTPRA-208ENST00000455631 RGS3P49796 1198 aa29.03■■■□□ 2.24
PTPRA-208ENST00000455631 ZSCAN29Q8IWY8 852 aaPredicted RBP29.03■■■□□ 2.24
PTPRA-208ENST00000455631 PHIPQ8WWQ0 1821 aa29.02■■■□□ 2.24
PTPRA-208ENST00000455631 CAPN2P17655 700 aa29.02■■■□□ 2.24
PTPRA-208ENST00000455631 PAWRQ96IZ0 340 aaKnown RBP29.02■■■□□ 2.24
PTPRA-208ENST00000455631 LRRFIP2Q9Y608 721 aaKnown RBP29.02■■■□□ 2.24
PTPRA-208ENST00000455631 LAMA3Q16787 3333 aa29.01■■■□□ 2.23
PTPRA-208ENST00000455631 TRIM75PA6NK02 468 aa29.01■■■□□ 2.23
PTPRA-208ENST00000455631 COA7Q96BR5 231 aa29.01■■■□□ 2.23
PTPRA-208ENST00000455631 GNL3LQ9NVN8 582 aaKnown RBP29.01■■■□□ 2.23
PTPRA-208ENST00000455631 COL6A3P12111 3177 aa29.01■■■□□ 2.23
PTPRA-208ENST00000455631 ENTPD3O75355 529 aa29■■■□□ 2.23
PTPRA-208ENST00000455631 RFX5P48382 616 aaPredicted RBP29■■■□□ 2.23
PTPRA-208ENST00000455631 ANKRD13CQ8N6S4 541 aa29■■■□□ 2.23
PTPRA-208ENST00000455631 DIS3LQ8TF46 1054 aaKnown RBP29■■■□□ 2.23
PTPRA-208ENST00000455631 CRISPLD2Q9H0B8 497 aa29■■■□□ 2.23
PTPRA-208ENST00000455631 USP44Q9H0E7 712 aa29■■■□□ 2.23
PTPRA-208ENST00000455631 DOCK3Q8IZD9 2030 aa28.99■■■□□ 2.23
PTPRA-208ENST00000455631 SALL1Q9NSC2 1324 aa28.99■■■□□ 2.23
PTPRA-208ENST00000455631 ATP2B3Q16720 1220 aa28.99■■■□□ 2.23
PTPRA-208ENST00000455631 NECAB2Q7Z6G3 386 aa28.99■■■□□ 2.23
PTPRA-208ENST00000455631 IDI2Q9BXS1 227 aa28.99■■■□□ 2.23
PTPRA-208ENST00000455631 PTPRCP08575 1304 aa28.98■■■□□ 2.23
PTPRA-208ENST00000455631 SH3BP5LQ7L8J4 393 aa28.98■■■□□ 2.23
PTPRA-208ENST00000455631 ATG9AQ7Z3C6 839 aa28.98■■■□□ 2.23
PTPRA-208ENST00000455631 C7orf61Q8IZ16 206 aa28.98■■■□□ 2.23
PTPRA-208ENST00000455631 MRPL50Q8N5N7 158 aaKnown RBP28.98■■■□□ 2.23
PTPRA-208ENST00000455631 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.98■■■□□ 2.236e-7■□□□□ 10.8
PTPRA-208ENST00000455631 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.98■■■□□ 2.23
PTPRA-208ENST00000455631 AGTPBP1Q9UPW5 1226 aa28.98■■■□□ 2.23
PTPRA-208ENST00000455631 RFX7Q2KHR2 1363 aa28.98■■■□□ 2.23
PTPRA-208ENST00000455631 SLURP2P0DP57 97 aa28.97■■■□□ 2.23
PTPRA-208ENST00000455631 SIL1Q9H173 461 aa28.97■■■□□ 2.23
PTPRA-208ENST00000455631 DENND2AQ9ULE3 1009 aa28.97■■■□□ 2.23
PTPRA-208ENST00000455631 CTNND1O60716 968 aaKnown RBP28.96■■■□□ 2.23
PTPRA-208ENST00000455631 CCDC84Q86UT8 332 aaPredicted RBP28.96■■■□□ 2.23
PTPRA-208ENST00000455631 DDTLA6NHG4 134 aaPredicted RBP28.95■■■□□ 2.22
PTPRA-208ENST00000455631 PHKA1P46020 1223 aa28.95■■■□□ 2.22
PTPRA-208ENST00000455631 PICALMQ13492 652 aa28.95■■■□□ 2.22
PTPRA-208ENST00000455631 DZIP1Q86YF9 867 aaKnown RBP28.95■■■□□ 2.22
PTPRA-208ENST00000455631 PNMA3Q9UL41 463 aa28.95■■■□□ 2.22
PTPRA-208ENST00000455631 ZMYND8Q9ULU4 1186 aaPredicted RBP28.95■■■□□ 2.22
PTPRA-208ENST00000455631 GAKO14976 1311 aa28.94■■■□□ 2.22
PTPRA-208ENST00000455631 SEMA3EO15041 775 aa28.94■■■□□ 2.22
PTPRA-208ENST00000455631 FAM110CQ1W6H9 321 aa28.94■■■□□ 2.22
PTPRA-208ENST00000455631 TREML2Q5T2D2 321 aa28.94■■■□□ 2.22
PTPRA-208ENST00000455631 ZGPATQ8N5A5 531 aaKnown RBP28.94■■■□□ 2.22
PTPRA-208ENST00000455631 GDF15Q99988 308 aa28.94■■■□□ 2.22
PTPRA-208ENST00000455631 CEP126Q9P2H0 1117 aa28.94■■■□□ 2.22
PTPRA-208ENST00000455631 MAP3K10Q02779 954 aa28.93■■■□□ 2.22
PTPRA-208ENST00000455631 DDX4Q9NQI0 724 aaKnown RBP28.93■■■□□ 2.22
PTPRA-208ENST00000455631 DDX60LQ5H9U9 1706 aaKnown RBP28.92■■■□□ 2.22
PTPRA-208ENST00000455631 HMGCRP04035 888 aa28.92■■■□□ 2.22
PTPRA-208ENST00000455631 BMP8BP34820 402 aa28.92■■■□□ 2.22
PTPRA-208ENST00000455631 ANKLE1Q8NAG6 615 aa28.92■■■□□ 2.22
PTPRA-208ENST00000455631 LOC285556D6RIA3 1793 aa28.91■■■□□ 2.22
PTPRA-208ENST00000455631 CIAO1O76071 339 aa28.91■■■□□ 2.22
PTPRA-208ENST00000455631 BTDP43251 543 aa28.9■■■□□ 2.22
PTPRA-208ENST00000455631 MNX1P50219 401 aaPredicted RBP28.9■■■□□ 2.22
PTPRA-208ENST00000455631 DEFB123Q8N688 67 aa28.9■■■□□ 2.22
PTPRA-208ENST00000455631 ABCF2Q9UG63 623 aa28.9■■■□□ 2.22
PTPRA-208ENST00000455631 FBXO3Q9UK99 471 aa28.9■■■□□ 2.22
PTPRA-208ENST00000455631 SYN1P17600 705 aa28.89■■■□□ 2.22
PTPRA-208ENST00000455631 GPR153Q6NV75 609 aa28.89■■■□□ 2.22
PTPRA-208ENST00000455631 SLF2Q8IX21 1173 aa28.89■■■□□ 2.22
PTPRA-208ENST00000455631 PROCA1Q8NCQ7 364 aaPredicted RBP28.89■■■□□ 2.22
PTPRA-208ENST00000455631 ATAD5Q96QE3 1844 aa28.88■■■□□ 2.21
PTPRA-208ENST00000455631 ADORA1P30542 326 aa28.88■■■□□ 2.21
PTPRA-208ENST00000455631 CCDC102BQ68D86 513 aa28.88■■■□□ 2.21
PTPRA-208ENST00000455631 Q7L0L9 218 aa28.88■■■□□ 2.21
PTPRA-208ENST00000455631 NBPF3Q9H094 633 aa28.88■■■□□ 2.21
PTPRA-208ENST00000455631 HMX1Q9NP08 348 aaPredicted RBP28.88■■■□□ 2.21
PTPRA-208ENST00000455631 FAM196BA6NMK8 535 aa28.87■■■□□ 2.21
PTPRA-208ENST00000455631 GCLCP48506 637 aaPredicted RBP28.87■■■□□ 2.21
PTPRA-208ENST00000455631 RPTORQ8N122 1335 aa28.87■■■□□ 2.21
PTPRA-208ENST00000455631 TRIM32Q13049 653 aa28.86■■■□□ 2.21
PTPRA-208ENST00000455631 SPP2Q13103 211 aa28.86■■■□□ 2.21
PTPRA-208ENST00000455631 RASGRF1Q13972 1273 aa28.86■■■□□ 2.21
PTPRA-208ENST00000455631 SSH1Q8WYL5 1049 aa28.86■■■□□ 2.21
PTPRA-208ENST00000455631 C11orf49Q9H6J7 331 aa28.86■■■□□ 2.21
PTPRA-208ENST00000455631 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.86■■■□□ 2.21
PTPRA-208ENST00000455631 MROH7-TTC4A0A0A0MT08 1334 aa28.86■■■□□ 2.21
PTPRA-208ENST00000455631 IL15P40933 162 aaPredicted RBP28.85■■■□□ 2.21
PTPRA-208ENST00000455631 MAGEA10P43363 369 aaPredicted RBP28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms