RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 FYB2Q5VWT5 728 aa4.89□□□□□ -1.63
LINC02540-201ENST00000455554 TSPAN15O95858 294 aa4.88□□□□□ -1.63
LINC02540-201ENST00000455554 KRT1P04264 644 aa4.88□□□□□ -1.63
LINC02540-201ENST00000455554 NEFLP07196 543 aa4.88□□□□□ -1.63
LINC02540-201ENST00000455554 HCLS1P14317 486 aaPredicted RBP4.88□□□□□ -1.63
LINC02540-201ENST00000455554 ZNF157P51786 506 aaPredicted RBP4.88□□□□□ -1.63
LINC02540-201ENST00000455554 ZSCAN18Q8TBC5 510 aaPredicted RBP4.88□□□□□ -1.63
LINC02540-201ENST00000455554 LIN37Q96GY3 246 aaPredicted RBP4.88□□□□□ -1.63
LINC02540-201ENST00000455554 PPP1R16BQ96T49 567 aa4.88□□□□□ -1.63
LINC02540-201ENST00000455554 TNKS2Q9H2K2 1166 aa4.88□□□□□ -1.63
LINC02540-201ENST00000455554 ANO2Q9NQ90 1003 aa4.88□□□□□ -1.63
LINC02540-201ENST00000455554 KRT82Q9NSB4 513 aa4.88□□□□□ -1.63
LINC02540-201ENST00000455554 PCOLCE2Q9UKZ9 415 aa4.88□□□□□ -1.63
LINC02540-201ENST00000455554 PCDHGC5Q9Y5F6 944 aa4.88□□□□□ -1.63
LINC02540-201ENST00000455554 SNX11Q9Y5W9 270 aa4.88□□□□□ -1.63
LINC02540-201ENST00000455554 CARNS1A5YM72 827 aa4.87□□□□□ -1.63
LINC02540-201ENST00000455554 ABL1P00519 1130 aa4.87□□□□□ -1.63
LINC02540-201ENST00000455554 NEFMP07197 916 aa4.87□□□□□ -1.63
LINC02540-201ENST00000455554 GSTP1P09211 210 aaKnown RBP4.87□□□□□ -1.63
LINC02540-201ENST00000455554 FAAP100Q0VG06 881 aa4.87□□□□□ -1.63
LINC02540-201ENST00000455554 ZNF211Q13398 564 aaPredicted RBP4.87□□□□□ -1.63
LINC02540-201ENST00000455554 IKZF1Q13422 519 aa4.87□□□□□ -1.63
LINC02540-201ENST00000455554 PRPF40BQ6NWY9 871 aaKnown RBP4.87□□□□□ -1.63
LINC02540-201ENST00000455554 TOP6BLQ8N6T0 577 aa4.87□□□□□ -1.63
LINC02540-201ENST00000455554 ASB11Q8WXH4 323 aa4.87□□□□□ -1.63
LINC02540-201ENST00000455554 HEXIM2Q96MH2 286 aaKnown RBP4.87□□□□□ -1.63
LINC02540-201ENST00000455554 KCNK12Q9HB15 430 aa4.87□□□□□ -1.63
LINC02540-201ENST00000455554 ABCB6Q9NP58 842 aa4.87□□□□□ -1.63
LINC02540-201ENST00000455554 NPHS2Q9NP85 383 aa4.87□□□□□ -1.63
LINC02540-201ENST00000455554 SERPINA10Q9UK55 444 aa4.87□□□□□ -1.63
LINC02540-201ENST00000455554 TMEM88BA6NKF7 163 aa4.86□□□□□ -1.63
LINC02540-201ENST00000455554 ZP2Q05996 745 aa4.86□□□□□ -1.63
LINC02540-201ENST00000455554 LILRA6Q6PI73 481 aa4.86□□□□□ -1.63
LINC02540-201ENST00000455554 LRRC56Q8IYG6 542 aaPredicted RBP4.86□□□□□ -1.63
LINC02540-201ENST00000455554 SSU72Q9NP77 194 aaKnown RBP4.86□□□□□ -1.63
LINC02540-201ENST00000455554 BRPF3Q9ULD4 1205 aa4.86□□□□□ -1.63
LINC02540-201ENST00000455554 CTNND2Q9UQB3 1225 aa4.86□□□□□ -1.63
LINC02540-201ENST00000455554 TMEM238LA0A1B0GVL6 79 aa4.85□□□□□ -1.63
LINC02540-201ENST00000455554 CPNE3O75131 537 aaKnown RBP4.85□□□□□ -1.63
LINC02540-201ENST00000455554 BUD31P41223 144 aaPredicted RBP4.85□□□□□ -1.63
LINC02540-201ENST00000455554 ECM1Q16610 540 aa4.85□□□□□ -1.63
LINC02540-201ENST00000455554 PHLDB3Q6NSJ2 640 aa4.85□□□□□ -1.63
LINC02540-201ENST00000455554 PRR23BQ6ZRT6 265 aa4.85□□□□□ -1.63
LINC02540-201ENST00000455554 FAM214BQ7L5A3 538 aa4.85□□□□□ -1.63
LINC02540-201ENST00000455554 ANKLE2Q86XL3 938 aa4.85□□□□□ -1.63
LINC02540-201ENST00000455554 SIAH1Q8IUQ4 282 aa4.85□□□□□ -1.63
LINC02540-201ENST00000455554 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.85□□□□□ -1.63
LINC02540-201ENST00000455554 ISL2Q96A47 359 aa4.85□□□□□ -1.63
LINC02540-201ENST00000455554 AFMP43652 599 aa4.84□□□□□ -1.63
LINC02540-201ENST00000455554 ORC1Q13415 861 aa4.84□□□□□ -1.63
LINC02540-201ENST00000455554 SYDE1Q6ZW31 735 aaPredicted RBP4.84□□□□□ -1.63
LINC02540-201ENST00000455554 UBE3DQ7Z6J8 389 aa4.84□□□□□ -1.63
LINC02540-201ENST00000455554 SPACA3Q8IXA5 215 aa4.84□□□□□ -1.63
LINC02540-201ENST00000455554 STK35Q8TDR2 534 aa4.84□□□□□ -1.63
LINC02540-201ENST00000455554 LMCD1Q9NZU5 365 aa4.84□□□□□ -1.63
LINC02540-201ENST00000455554 GTF2IRD1Q9UHL9 959 aa4.84□□□□□ -1.63
LINC02540-201ENST00000455554 TRAK1Q9UPV9 953 aa4.84□□□□□ -1.63
LINC02540-201ENST00000455554 NCANO14594 1321 aa4.83□□□□□ -1.64
LINC02540-201ENST00000455554 IGF2BP3O00425 579 aaKnown RBP eCLIP4.83□□□□□ -1.64
LINC02540-201ENST00000455554 PRRG2O14669 202 aa4.83□□□□□ -1.64
LINC02540-201ENST00000455554 GADD45BO75293 160 aaPredicted RBP4.83□□□□□ -1.64
LINC02540-201ENST00000455554 GLI1P08151 1106 aa4.83□□□□□ -1.64
LINC02540-201ENST00000455554 ZSCAN22P10073 491 aaPredicted RBP4.83□□□□□ -1.64
LINC02540-201ENST00000455554 PPP2R3AQ06190 1150 aa4.83□□□□□ -1.64
LINC02540-201ENST00000455554 MPZL3Q6UWV2 235 aa4.83□□□□□ -1.64
LINC02540-201ENST00000455554 PDZD3Q86UT5 571 aa4.83□□□□□ -1.64
LINC02540-201ENST00000455554 RNF214Q8ND24 703 aa4.83□□□□□ -1.64
LINC02540-201ENST00000455554 KCNB2Q92953 911 aa4.83□□□□□ -1.64
LINC02540-201ENST00000455554 C1QTNF9P0C862 333 aa4.82□□□□□ -1.64
LINC02540-201ENST00000455554 ERVK-24P63145 666 aa4.82□□□□□ -1.64
LINC02540-201ENST00000455554 PDE3BQ13370 1112 aa4.82□□□□□ -1.64
LINC02540-201ENST00000455554 NKPD1Q17RQ9 610 aa4.82□□□□□ -1.64
LINC02540-201ENST00000455554 ZC3H12AQ5D1E8 599 aaKnown RBP4.82□□□□□ -1.64
LINC02540-201ENST00000455554 MPRIPQ6WCQ1 1025 aa4.82□□□□□ -1.64
LINC02540-201ENST00000455554 CCDC74AQ96AQ1 378 aa4.82□□□□□ -1.64
LINC02540-201ENST00000455554 KIRREL1Q96J84 757 aa4.82□□□□□ -1.64
LINC02540-201ENST00000455554 TMEM39AQ9NV64 488 aa4.82□□□□□ -1.64
LINC02540-201ENST00000455554 C19orf73Q9NVV2 129 aa4.82□□□□□ -1.64
LINC02540-201ENST00000455554 EGFL7Q9UHF1 273 aa4.82□□□□□ -1.64
LINC02540-201ENST00000455554 GPN3Q9UHW5 284 aaPredicted RBP4.82□□□□□ -1.64
LINC02540-201ENST00000455554 PITPNM2Q9BZ72 1349 aa4.81□□□□□ -1.64
LINC02540-201ENST00000455554 GNAT3A8MTJ3 354 aa4.81□□□□□ -1.64
LINC02540-201ENST00000455554 B8ZZF3 427 aa4.81□□□□□ -1.64
LINC02540-201ENST00000455554 NFIBO00712 420 aa4.81□□□□□ -1.64
LINC02540-201ENST00000455554 NDUFB5O43674 189 aa4.81□□□□□ -1.64
LINC02540-201ENST00000455554 ICMTO60725 284 aa4.81□□□□□ -1.64
LINC02540-201ENST00000455554 CLCN7P51798 805 aa4.81□□□□□ -1.64
LINC02540-201ENST00000455554 GRM2Q14416 872 aa4.81□□□□□ -1.64
LINC02540-201ENST00000455554 TMEM67Q5HYA8 995 aa4.81□□□□□ -1.64
LINC02540-201ENST00000455554 DTHD1Q6ZMT9 781 aa4.81□□□□□ -1.64
LINC02540-201ENST00000455554 TTLL10Q6ZVT0 673 aa4.81□□□□□ -1.64
LINC02540-201ENST00000455554 CYFIP1Q7L576 1253 aa4.81□□□□□ -1.64
LINC02540-201ENST00000455554 FAM129BQ96TA1 746 aa4.81□□□□□ -1.64
LINC02540-201ENST00000455554 DNAJC25Q9H1X3 360 aa4.81□□□□□ -1.64
LINC02540-201ENST00000455554 PRDM10Q9NQV6 1147 aa4.81□□□□□ -1.64
LINC02540-201ENST00000455554 RAPGEFL1Q9UHV5 662 aa4.81□□□□□ -1.64
LINC02540-201ENST00000455554 CNTNAP4Q9C0A0 1308 aa4.8□□□□□ -1.64
LINC02540-201ENST00000455554 H3BRB1 525 aa4.8□□□□□ -1.64
LINC02540-201ENST00000455554 EIF1AYO14602 144 aaKnown RBP4.8□□□□□ -1.64
LINC02540-201ENST00000455554 SULF2Q8IWU5 870 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms