RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 SKILP12757 684 aa14.15□□□□□ -0.14
SEMA4D-213ENST00000455551 GTF2F1P35269 517 aaKnown RBP eCLIP14.15□□□□□ -0.14
SEMA4D-213ENST00000455551 CHRNDQ07001 517 aa14.15□□□□□ -0.14
SEMA4D-213ENST00000455551 SSRP1Q08945 709 aaKnown RBP14.15□□□□□ -0.14
SEMA4D-213ENST00000455551 ALX1Q15699 326 aa14.15□□□□□ -0.14
SEMA4D-213ENST00000455551 SPECC1Q5M775 1068 aa14.15□□□□□ -0.14
SEMA4D-213ENST00000455551 SGMS1Q86VZ5 419 aa14.15□□□□□ -0.14
SEMA4D-213ENST00000455551 SHC4Q6S5L8 630 aa14.15□□□□□ -0.14
SEMA4D-213ENST00000455551 NUP133Q8WUM0 1156 aa14.15□□□□□ -0.14
SEMA4D-213ENST00000455551 SDR42E1Q8WUS8 393 aa14.15□□□□□ -0.14
SEMA4D-213ENST00000455551 COL14A1Q05707 1796 aaKnown RBP14.15□□□□□ -0.14
SEMA4D-213ENST00000455551 MINDY4BA8MYZ0 360 aa14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 TRMT1Q9NXH9 659 aaKnown RBP14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 IFNKQ9P0W0 207 aa14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 LRP5O75197 1615 aa14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 KCNQ4P56696 695 aa14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 NACAP1Q9BZK3 213 aa14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 BTBD18B2RXH4 712 aa14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 NTSR2O95665 410 aa14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 CYP7A1P22680 504 aa14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 LMOD1P29536 600 aaPredicted RBP14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 GYG1P46976 350 aa14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 PNOCQ13519 176 aa14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 PTPAQ15257 358 aa14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 SMIM5Q71RC9 77 aa14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 ADGRA1Q86SQ6 560 aa14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 XPO4Q9C0E2 1151 aaKnown RBP14.14□□□□□ -0.15
SEMA4D-213ENST00000455551 ATP2B1P20020 1258 aa14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 LIFRP42702 1097 aa14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 NLRP12P59046 1061 aa14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 WTAPQ15007 396 aa14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 NBPF11Q86T75 865 aa14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 MARCH10Q8NA82 808 aaPredicted RBP14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 RAI14Q9P0K7 980 aa14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 RTN1Q16799 776 aa14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 BICDL1Q6ZP65 573 aa14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 AK7Q96M32 723 aa14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 MAP3K14Q99558 947 aa14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 KRT23Q9C075 422 aa14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 CNNM2Q9H8M5 875 aa14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 TMC6Q7Z403 805 aa14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 JMYQ8N9B5 988 aa14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 CHD4Q14839 1912 aa14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 ECM29Q5VYK3 1845 aa14.13□□□□□ -0.15
SEMA4D-213ENST00000455551 NUTM2BA6NNL0 878 aaPredicted RBP14.12□□□□□ -0.15
SEMA4D-213ENST00000455551 NUTM2EB1AL46 878 aaPredicted RBP14.12□□□□□ -0.15
SEMA4D-213ENST00000455551 PARP10Q53GL7 1025 aa14.12□□□□□ -0.15
SEMA4D-213ENST00000455551 NUTM2AQ8IVF1 878 aaPredicted RBP14.12□□□□□ -0.15
SEMA4D-213ENST00000455551 MYH14Q7Z406 1995 aaKnown RBP14.12□□□□□ -0.15
SEMA4D-213ENST00000455551 KCNQ2O43526 872 aa14.12□□□□□ -0.15
SEMA4D-213ENST00000455551 U2AF2P26368 475 aaKnown RBP eCLIP14.12□□□□□ -0.15
SEMA4D-213ENST00000455551 CCZ1BP86790 482 aa14.12□□□□□ -0.15
SEMA4D-213ENST00000455551 CCZ1P86791 482 aaPredicted RBP14.12□□□□□ -0.15
SEMA4D-213ENST00000455551 C3orf67Q6ZVT6 689 aa14.12□□□□□ -0.15
SEMA4D-213ENST00000455551 COL4A1P02462 1669 aa14.12□□□□□ -0.15
SEMA4D-213ENST00000455551 ERICH2A1L162 156 aa14.12□□□□□ -0.15
SEMA4D-213ENST00000455551 FMNL1O95466 1100 aaPredicted RBP14.12□□□□□ -0.15
SEMA4D-213ENST00000455551 SART3Q15020 963 aaKnown RBP14.12□□□□□ -0.15
SEMA4D-213ENST00000455551 DIS3L2Q8IYB7 885 aaKnown RBP14.12□□□□□ -0.15
SEMA4D-213ENST00000455551 COL16A1Q07092 1604 aaPredicted RBP14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 ATP1A3P13637 1013 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 STAG1Q8WVM7 1258 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 ARAP2Q8WZ64 1704 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 CYP2D7A0A087X1C5 515 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 PPP6R2O75170 966 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 IFNAR1P17181 557 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 PPARAQ07869 468 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 NR5A1Q13285 461 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 NCAPHQ15003 741 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 PTPN21Q16825 1174 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 MTERF4Q7Z6M4 381 aaKnown RBP14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 NOSTRINQ8IVI9 506 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 TRIM22Q8IYM9 498 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 HPSEQ9Y251 543 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 FOXN1O15353 648 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 GRIN1Q05586 938 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 LONRF3Q496Y0 759 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 UBAC1Q9BSL1 405 aa14.11□□□□□ -0.15
SEMA4D-213ENST00000455551 SPATA31A1Q5TZJ5 1347 aa14.1□□□□□ -0.15
SEMA4D-213ENST00000455551 hCG_1642624A0A1W2PR95 340 aa14.1□□□□□ -0.15
SEMA4D-213ENST00000455551 GNAT2P19087 354 aa14.1□□□□□ -0.15
SEMA4D-213ENST00000455551 RBM6P78332 1123 aaKnown RBP14.1□□□□□ -0.15
SEMA4D-213ENST00000455551 SAFBQ15424 915 aaKnown RBP eCLIP14.1□□□□□ -0.15
SEMA4D-213ENST00000455551 ERFEQ4G0M1 354 aa14.1□□□□□ -0.15
SEMA4D-213ENST00000455551 NEMFO60524 1076 aa14.1□□□□□ -0.15
SEMA4D-213ENST00000455551 PRDM1O75626 825 aa14.1□□□□□ -0.15
SEMA4D-213ENST00000455551 TPM4P67936 248 aa14.1□□□□□ -0.15
SEMA4D-213ENST00000455551 RESP18Q5W5W9 173 aa14.1□□□□□ -0.15
SEMA4D-213ENST00000455551 CEP135Q66GS9 1140 aa14.1□□□□□ -0.15
SEMA4D-213ENST00000455551 CNNM3Q8NE01 707 aa14.1□□□□□ -0.15
SEMA4D-213ENST00000455551 KCNH3Q9ULD8 1083 aa14.1□□□□□ -0.15
SEMA4D-213ENST00000455551 PNPLA7Q6ZV29 1317 aa14.1□□□□□ -0.15
SEMA4D-213ENST00000455551 DOCK2Q92608 1830 aa14.1□□□□□ -0.15
SEMA4D-213ENST00000455551 MMP1P03956 469 aa14.09□□□□□ -0.15
SEMA4D-213ENST00000455551 DYNLL1P63167 89 aaKnown RBP14.09□□□□□ -0.15
SEMA4D-213ENST00000455551 HSP90AA4PQ58FG1 418 aa14.09□□□□□ -0.15
SEMA4D-213ENST00000455551 METTL16Q86W50 562 aaKnown RBP14.09□□□□□ -0.15
SEMA4D-213ENST00000455551 ZNF654Q8IZM8 581 aa14.09□□□□□ -0.15
SEMA4D-213ENST00000455551 BPIFA3Q9BQP9 254 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms