RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 GIMAP6Q6P9H5 292 aa18.69■□□□□ 0.58
SNX17-204ENST00000453453 RASEFQ8IZ41 740 aa18.69■□□□□ 0.58
SNX17-204ENST00000453453 MRIQ9BWK5 157 aa18.69■□□□□ 0.58
SNX17-204ENST00000453453 DAGLAQ9Y4D2 1042 aa18.69■□□□□ 0.58
SNX17-204ENST00000453453 ZNF213O14771 459 aa18.68■□□□□ 0.58
SNX17-204ENST00000453453 FOXP2O15409 715 aa18.68■□□□□ 0.58
SNX17-204ENST00000453453 PRKAB2O43741 272 aa18.68■□□□□ 0.58
SNX17-204ENST00000453453 TSGA10IPQ3SY00 556 aa18.68■□□□□ 0.58
SNX17-204ENST00000453453 ZMYND15Q9H091 742 aa18.68■□□□□ 0.58
SNX17-204ENST00000453453 ATP8A2Q9NTI2 1148 aa18.68■□□□□ 0.58
SNX17-204ENST00000453453 HDAC9Q9UKV0 1011 aa18.68■□□□□ 0.58
SNX17-204ENST00000453453 CYP21A2P08686 494 aa18.67■□□□□ 0.58
SNX17-204ENST00000453453 LMNB1P20700 586 aa18.67■□□□□ 0.58
SNX17-204ENST00000453453 USP5P45974 858 aa18.67■□□□□ 0.58
SNX17-204ENST00000453453 MCM2P49736 904 aa18.67■□□□□ 0.58
SNX17-204ENST00000453453 SCNN1DP51172 638 aa18.67■□□□□ 0.58
SNX17-204ENST00000453453 AGBL3Q8NEM8 1001 aa18.67■□□□□ 0.58
SNX17-204ENST00000453453 NAV1Q8NEY1 1877 aa18.67■□□□□ 0.58
SNX17-204ENST00000453453 JAKMIP1Q96N16 626 aaKnown RBP18.67■□□□□ 0.58
SNX17-204ENST00000453453 TM6SF1Q9BZW5 370 aa18.67■□□□□ 0.58
SNX17-204ENST00000453453 SERPINA10Q9UK55 444 aa18.67■□□□□ 0.58
SNX17-204ENST00000453453 SBF1O95248 1867 aa18.67■□□□□ 0.58
SNX17-204ENST00000453453 CDK5RAP2Q96SN8 1893 aa18.67■□□□□ 0.58
SNX17-204ENST00000453453 BAZ2AQ9UIF9 1905 aaKnown RBP18.67■□□□□ 0.58
SNX17-204ENST00000453453 CRKP46108 304 aa18.67■□□□□ 0.58
SNX17-204ENST00000453453 RBM5P52756 815 aaKnown RBP eCLIP18.67■□□□□ 0.58
SNX17-204ENST00000453453 CXCL9Q07325 125 aa18.67■□□□□ 0.58
SNX17-204ENST00000453453 MCTP1Q6DN14 999 aa18.67■□□□□ 0.58
SNX17-204ENST00000453453 SH3RF3Q8TEJ3 882 aaPredicted RBP18.67■□□□□ 0.58
SNX17-204ENST00000453453 SDR42E1Q8WUS8 393 aa18.67■□□□□ 0.58
SNX17-204ENST00000453453 EPB41L4AQ9HCS5 686 aaPredicted RBP18.67■□□□□ 0.58
SNX17-204ENST00000453453 CCDC39Q9UFE4 941 aa18.67■□□□□ 0.58
SNX17-204ENST00000453453 LAMB1P07942 1786 aa18.66■□□□□ 0.58
SNX17-204ENST00000453453 ADAMTSL1Q8N6G6 1762 aa18.66■□□□□ 0.58
SNX17-204ENST00000453453 ECM29Q5VYK3 1845 aa18.66■□□□□ 0.58
SNX17-204ENST00000453453 AMOTL1Q8IY63 956 aa18.66■□□□□ 0.58
SNX17-204ENST00000453453 TEX11Q8IYF3 940 aa18.66■□□□□ 0.58
SNX17-204ENST00000453453 OGFOD1Q8N543 542 aa18.66■□□□□ 0.58
SNX17-204ENST00000453453 ZKSCAN5Q9Y2L8 839 aa18.66■□□□□ 0.58
SNX17-204ENST00000453453 FOCADQ5VW36 1801 aa18.65■□□□□ 0.58
SNX17-204ENST00000453453 CASTP20810 708 aaKnown RBP18.65■□□□□ 0.58
SNX17-204ENST00000453453 NEK4P51957 841 aa18.65■□□□□ 0.58
SNX17-204ENST00000453453 LRSAM1Q6UWE0 723 aa18.65■□□□□ 0.58
SNX17-204ENST00000453453 ZDHHC15Q96MV8 337 aa18.65■□□□□ 0.58
SNX17-204ENST00000453453 CYP46A1Q9Y6A2 500 aa18.65■□□□□ 0.58
SNX17-204ENST00000453453 MMP14P50281 582 aa18.64■□□□□ 0.57
SNX17-204ENST00000453453 HAND2P61296 217 aa18.64■□□□□ 0.57
SNX17-204ENST00000453453 CAVIN1Q6NZI2 390 aaKnown RBP18.64■□□□□ 0.57
SNX17-204ENST00000453453 FZD9O00144 591 aa18.63■□□□□ 0.57
SNX17-204ENST00000453453 HMGB1P09429 215 aaKnown RBP18.63■□□□□ 0.57
SNX17-204ENST00000453453 YBX3P16989 372 aaKnown RBP eCLIP18.63■□□□□ 0.57
SNX17-204ENST00000453453 RPS12P25398 132 aaKnown RBP18.63■□□□□ 0.57
SNX17-204ENST00000453453 GPR162Q16538 588 aa18.63■□□□□ 0.57
SNX17-204ENST00000453453 BLOC1S2Q6QNY1 142 aa18.63■□□□□ 0.57
SNX17-204ENST00000453453 DCP1AQ9NPI6 582 aaPredicted RBP18.63■□□□□ 0.57
SNX17-204ENST00000453453 FOXD4L1Q9NU39 408 aa18.63■□□□□ 0.57
SNX17-204ENST00000453453 ARPP21Q9UBL0 812 aaPredicted RBP18.63■□□□□ 0.57
SNX17-204ENST00000453453 TIAM2Q8IVF5 1701 aa18.63■□□□□ 0.57
SNX17-204ENST00000453453 E7EWF7 191 aa18.63■□□□□ 0.57
SNX17-204ENST00000453453 DYNC1I1O14576 645 aa18.63■□□□□ 0.57
SNX17-204ENST00000453453 USP17L8P0C7I0 530 aa18.63■□□□□ 0.57
SNX17-204ENST00000453453 TRDNQ13061 729 aa18.63■□□□□ 0.57
SNX17-204ENST00000453453 ADCK5Q3MIX3 580 aa18.63■□□□□ 0.57
SNX17-204ENST00000453453 NEK1Q96PY6 1258 aa18.63■□□□□ 0.57
SNX17-204ENST00000453453 GMLQ99445 158 aa18.63■□□□□ 0.57
SNX17-204ENST00000453453 UPF3BQ9BZI7 483 aaKnown RBP18.63■□□□□ 0.57
SNX17-204ENST00000453453 ZSWIM6Q9HCJ5 1215 aa18.63■□□□□ 0.57
SNX17-204ENST00000453453 USP40Q9NVE5 1235 aa18.63■□□□□ 0.57
SNX17-204ENST00000453453 MYH1P12882 1939 aa18.62■□□□□ 0.57
SNX17-204ENST00000453453 SLC3A2P08195 630 aaKnown RBP18.62■□□□□ 0.57
SNX17-204ENST00000453453 PRELPP51888 382 aa18.62■□□□□ 0.57
SNX17-204ENST00000453453 CFAP100Q494V2 611 aa18.62■□□□□ 0.57
SNX17-204ENST00000453453 RUFY3Q7L099 469 aa18.62■□□□□ 0.57
SNX17-204ENST00000453453 RALYLQ86SE5 291 aaKnown RBP18.62■□□□□ 0.57
SNX17-204ENST00000453453 TGFBRAP1Q8WUH2 860 aa18.62■□□□□ 0.57
SNX17-204ENST00000453453 RBSNQ9H1K0 784 aa18.62■□□□□ 0.57
SNX17-204ENST00000453453 MINDY4BA8MYZ0 360 aa18.61■□□□□ 0.57
SNX17-204ENST00000453453 RHBDL3P58872 404 aa18.61■□□□□ 0.57
SNX17-204ENST00000453453 PPARAQ07869 468 aa18.61■□□□□ 0.57
SNX17-204ENST00000453453 RNF41Q9H4P4 317 aaPredicted RBP18.61■□□□□ 0.57
SNX17-204ENST00000453453 MCM9Q9NXL9 1143 aa18.61■□□□□ 0.57
SNX17-204ENST00000453453 ZBTB12Q9Y330 459 aaPredicted RBP18.61■□□□□ 0.57
SNX17-204ENST00000453453 TAF6LQ9Y6J9 622 aa18.61■□□□□ 0.57
SNX17-204ENST00000453453 GRIN3BO60391 1043 aa18.6■□□□□ 0.57
SNX17-204ENST00000453453 DLGAP5Q15398 846 aa18.6■□□□□ 0.57
SNX17-204ENST00000453453 SBK1Q52WX2 424 aa18.6■□□□□ 0.57
SNX17-204ENST00000453453 APOBEC3HQ6NTF7 200 aaKnown RBP18.6■□□□□ 0.57
SNX17-204ENST00000453453 MAPKAPK5Q8IW41 473 aa18.6■□□□□ 0.57
SNX17-204ENST00000453453 NCOA7Q8NI08 942 aa18.6■□□□□ 0.57
SNX17-204ENST00000453453 SYAP1Q96A49 352 aaPredicted RBP18.6■□□□□ 0.57
SNX17-204ENST00000453453 CNNM2Q9H8M5 875 aa18.6■□□□□ 0.57
SNX17-204ENST00000453453 PDRG1Q9NUG6 133 aa18.6■□□□□ 0.57
SNX17-204ENST00000453453 ANAPC4Q9UJX5 808 aa18.6■□□□□ 0.57
SNX17-204ENST00000453453 GJA3Q9Y6H8 435 aa18.6■□□□□ 0.57
SNX17-204ENST00000453453 USP17L12C9JPN9 530 aa18.6■□□□□ 0.57
SNX17-204ENST00000453453 USP17L21D6R901 530 aa18.6■□□□□ 0.57
SNX17-204ENST00000453453 RPS6KB1P23443 525 aa18.6■□□□□ 0.57
SNX17-204ENST00000453453 CDC42EP5Q6NZY7 148 aa18.6■□□□□ 0.57
SNX17-204ENST00000453453 CTR9Q6PD62 1173 aa18.6■□□□□ 0.57
SNX17-204ENST00000453453 MFSD6Q6ZSS7 791 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms