RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ZNF157P51786 506 aaPredicted RBP16.94■□□□□ 0.3
GTF3C3-206ENST00000448539 DYNLL1P63167 89 aaKnown RBP16.94■□□□□ 0.3
GTF3C3-206ENST00000448539 RGMBQ6NW40 437 aa16.94■□□□□ 0.3
GTF3C3-206ENST00000448539 MOB2Q70IA6 237 aa16.94■□□□□ 0.3
GTF3C3-206ENST00000448539 KBTBD3Q8NAB2 608 aa16.94■□□□□ 0.3
GTF3C3-206ENST00000448539 AIDAQ96BJ3 306 aa16.94■□□□□ 0.3
GTF3C3-206ENST00000448539 WBP1LQ9NX94 342 aa16.94■□□□□ 0.3
GTF3C3-206ENST00000448539 PAPPA2Q9BXP8 1791 aa16.94■□□□□ 0.3
GTF3C3-206ENST00000448539 THSD7BQ9C0I4 1608 aa16.93■□□□□ 0.3
GTF3C3-206ENST00000448539 CAPN15O75808 1086 aa16.93■□□□□ 0.3
GTF3C3-206ENST00000448539 USP5P45974 858 aa16.93■□□□□ 0.3
GTF3C3-206ENST00000448539 UBE3CQ15386 1083 aa16.93■□□□□ 0.3
GTF3C3-206ENST00000448539 CYP4F22Q6NT55 531 aa16.93■□□□□ 0.3
GTF3C3-206ENST00000448539 CDAN1Q8IWY9 1227 aa16.93■□□□□ 0.3
GTF3C3-206ENST00000448539 TGFBRAP1Q8WUH2 860 aa16.93■□□□□ 0.3
GTF3C3-206ENST00000448539 CAPNS2Q96L46 248 aa16.93■□□□□ 0.3
GTF3C3-206ENST00000448539 CSRNP1Q96S65 589 aa16.93■□□□□ 0.3
GTF3C3-206ENST00000448539 FSD1Q9BTV5 496 aa16.93■□□□□ 0.3
GTF3C3-206ENST00000448539 DDX4Q9NQI0 724 aaKnown RBP16.93■□□□□ 0.3
GTF3C3-206ENST00000448539 TCRBV5S4A2TA0A5A2 114 aa16.92■□□□□ 0.3
GTF3C3-206ENST00000448539 ZFYP08048 801 aaPredicted RBP16.92■□□□□ 0.3
GTF3C3-206ENST00000448539 CTCFP49711 727 aaPredicted RBP16.92■□□□□ 0.3
GTF3C3-206ENST00000448539 MAP3K11Q16584 847 aa16.92■□□□□ 0.3
GTF3C3-206ENST00000448539 MAPKAPK5Q8IW41 473 aa16.92■□□□□ 0.3
GTF3C3-206ENST00000448539 PLEKHM2Q8IWE5 1019 aa16.92■□□□□ 0.3
GTF3C3-206ENST00000448539 ZFPM1Q8IX07 1006 aa16.92■□□□□ 0.3
GTF3C3-206ENST00000448539 CCDC102AQ96A19 550 aa16.92■□□□□ 0.3
GTF3C3-206ENST00000448539 FZD1Q9UP38 647 aa16.92■□□□□ 0.3
GTF3C3-206ENST00000448539 DOCK2Q92608 1830 aa16.91■□□□□ 0.3
GTF3C3-206ENST00000448539 RFX7Q2KHR2 1363 aa16.91■□□□□ 0.3
GTF3C3-206ENST00000448539 MYO5AQ9Y4I1 1855 aaKnown RBP16.91■□□□□ 0.3
GTF3C3-206ENST00000448539 SSC5DA1L4H1 1573 aa16.91■□□□□ 0.3
GTF3C3-206ENST00000448539 USP2O75604 605 aaPredicted RBP16.91■□□□□ 0.3
GTF3C3-206ENST00000448539 CENPQQ7L2Z9 268 aaPredicted RBP16.91■□□□□ 0.3
GTF3C3-206ENST00000448539 MIGA2Q7L4E1 593 aa16.91■□□□□ 0.3
GTF3C3-206ENST00000448539 EVI5LQ96CN4 794 aa16.91■□□□□ 0.3
GTF3C3-206ENST00000448539 CCDC136Q96JN2 1154 aa16.91■□□□□ 0.3
GTF3C3-206ENST00000448539 RIOK1Q9BRS2 568 aaKnown RBP16.91■□□□□ 0.3
GTF3C3-206ENST00000448539 ZNF341Q9BYN7 854 aa16.91■□□□□ 0.3
GTF3C3-206ENST00000448539 CRNKL1Q9BZJ0 848 aaKnown RBP16.91■□□□□ 0.3
GTF3C3-206ENST00000448539 OSBPL5Q9H0X9 879 aaPredicted RBP16.91■□□□□ 0.3
GTF3C3-206ENST00000448539 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.91■□□□□ 0.3
GTF3C3-206ENST00000448539 UNCXA6NJT0 531 aa16.9■□□□□ 0.3
GTF3C3-206ENST00000448539 TRIM6-TRIM34B2RNG4 842 aa16.9■□□□□ 0.3
GTF3C3-206ENST00000448539 RNF113AO15541 343 aaKnown RBP16.9■□□□□ 0.3
GTF3C3-206ENST00000448539 ANKRD13AQ8IZ07 590 aa16.9■□□□□ 0.3
GTF3C3-206ENST00000448539 DHX36Q9H2U1 1008 aaKnown RBP16.9■□□□□ 0.3
GTF3C3-206ENST00000448539 PRDM10Q9NQV6 1147 aa16.9■□□□□ 0.3
GTF3C3-206ENST00000448539 CSADQ9Y600 493 aa16.9■□□□□ 0.3
GTF3C3-206ENST00000448539 FLT1P17948 1338 aa16.9■□□□□ 0.3
GTF3C3-206ENST00000448539 DDTLA6NHG4 134 aaPredicted RBP16.89■□□□□ 0.29
GTF3C3-206ENST00000448539 MBD4O95243 580 aa16.89■□□□□ 0.29
GTF3C3-206ENST00000448539 LBX1P52954 281 aa16.89■□□□□ 0.29
GTF3C3-206ENST00000448539 MAP2K1Q02750 393 aaPredicted RBP16.89■□□□□ 0.29
GTF3C3-206ENST00000448539 SLFNL1Q499Z3 407 aa16.89■□□□□ 0.29
GTF3C3-206ENST00000448539 LDLRAD1Q5T700 205 aa16.89■□□□□ 0.29
GTF3C3-206ENST00000448539 RILPL2Q969X0 211 aa16.89■□□□□ 0.29
GTF3C3-206ENST00000448539 SLC10A4Q96EP9 437 aa16.89■□□□□ 0.29
GTF3C3-206ENST00000448539 OSBPL3Q9H4L5 887 aa16.89■□□□□ 0.29
GTF3C3-206ENST00000448539 AOC2O75106 756 aa16.88■□□□□ 0.29
GTF3C3-206ENST00000448539 HLA-DOAP06340 250 aa16.88■□□□□ 0.29
GTF3C3-206ENST00000448539 HSPA8P11142 646 aaKnown RBP16.88■□□□□ 0.29
GTF3C3-206ENST00000448539 MAP3K9P80192 1104 aa16.88■□□□□ 0.29
GTF3C3-206ENST00000448539 NOGQ13253 232 aa16.88■□□□□ 0.29
GTF3C3-206ENST00000448539 SH3BP5LQ7L8J4 393 aa16.88■□□□□ 0.29
GTF3C3-206ENST00000448539 LCORLQ8N3X6 602 aa16.88■□□□□ 0.29
GTF3C3-206ENST00000448539 APPBP2Q92624 585 aa16.88■□□□□ 0.29
GTF3C3-206ENST00000448539 DDRGK1Q96HY6 314 aa16.88■□□□□ 0.29
GTF3C3-206ENST00000448539 WRNIP1Q96S55 665 aa16.88■□□□□ 0.29
GTF3C3-206ENST00000448539 TRIM34Q9BYJ4 488 aa16.88■□□□□ 0.29
GTF3C3-206ENST00000448539 ARMT1Q9H993 441 aa16.88■□□□□ 0.29
GTF3C3-206ENST00000448539 PI4KBQ9UBF8 816 aa16.88■□□□□ 0.29
GTF3C3-206ENST00000448539 SAP30BPQ9UHR5 308 aaKnown RBP16.88■□□□□ 0.29
GTF3C3-206ENST00000448539 ATRNL1Q5VV63 1379 aa16.88■□□□□ 0.29
GTF3C3-206ENST00000448539 CHGBP05060 677 aa16.87■□□□□ 0.29
GTF3C3-206ENST00000448539 SLC10A3P09131 477 aa16.87■□□□□ 0.29
GTF3C3-206ENST00000448539 RASAL3Q86YV0 1011 aa16.87■□□□□ 0.29
GTF3C3-206ENST00000448539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.87■□□□□ 0.29
GTF3C3-206ENST00000448539 AK9Q5TCS8 1911 aa16.87■□□□□ 0.29
GTF3C3-206ENST00000448539 COL2A1P02458 1487 aaPredicted RBP16.86■□□□□ 0.29
GTF3C3-206ENST00000448539 PDE4AP27815 886 aa16.86■□□□□ 0.29
GTF3C3-206ENST00000448539 MAP2K2P36507 400 aa16.86■□□□□ 0.29
GTF3C3-206ENST00000448539 MAPK8IP2Q13387 824 aaPredicted RBP16.86■□□□□ 0.29
GTF3C3-206ENST00000448539 ERICH6BQ5W0A0 696 aa16.86■□□□□ 0.29
GTF3C3-206ENST00000448539 CLMNQ96JQ2 1002 aa16.86■□□□□ 0.29
GTF3C3-206ENST00000448539 PUS7LQ9H0K6 701 aaKnown RBP16.86■□□□□ 0.29
GTF3C3-206ENST00000448539 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.86■□□□□ 0.29
GTF3C3-206ENST00000448539 PALD1Q9ULE6 856 aa16.86■□□□□ 0.29
GTF3C3-206ENST00000448539 FAM155AB1AL88 458 aaPredicted RBP16.85■□□□□ 0.29
GTF3C3-206ENST00000448539 TBC1D12O60347 775 aa16.85■□□□□ 0.29
GTF3C3-206ENST00000448539 POLR3DP05423 398 aaPredicted RBP16.85■□□□□ 0.29
GTF3C3-206ENST00000448539 VGLL4Q14135 290 aa16.85■□□□□ 0.29
GTF3C3-206ENST00000448539 TTC6Q86TZ1 520 aa16.85■□□□□ 0.29
GTF3C3-206ENST00000448539 AMOTL1Q8IY63 956 aa16.85■□□□□ 0.29
GTF3C3-206ENST00000448539 CRACR2BQ8N4Y2 399 aaPredicted RBP16.85■□□□□ 0.29
GTF3C3-206ENST00000448539 SDR42E1Q8WUS8 393 aa16.85■□□□□ 0.29
GTF3C3-206ENST00000448539 OSBP2Q969R2 916 aa16.85■□□□□ 0.29
GTF3C3-206ENST00000448539 ELP3Q9H9T3 547 aa16.85■□□□□ 0.29
GTF3C3-206ENST00000448539 ATP8A2Q9NTI2 1148 aa16.85■□□□□ 0.29
GTF3C3-206ENST00000448539 HERC5Q9UII4 1024 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms