RNA–Protein interactions for RNA: ENST00000448327.1

LINC01564-201, Transcript of long intergenic non-protein coding RNA 1564, humanhuman

TSL 3 BASIC

Gene LINC01564, Length 566 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01564-201ENST00000448327 EHD4Q9H223 541 aa5.93□□□□□ -1.46
LINC01564-201ENST00000448327 CCDC86Q9H6F5 360 aaKnown RBP5.93□□□□□ -1.46
LINC01564-201ENST00000448327 PCOLCE2Q9UKZ9 415 aa5.93□□□□□ -1.46
LINC01564-201ENST00000448327 NFIBO00712 420 aa5.92□□□□□ -1.46
LINC01564-201ENST00000448327 FZD6O60353 706 aa5.92□□□□□ -1.46
LINC01564-201ENST00000448327 ECM1Q16610 540 aa5.92□□□□□ -1.46
LINC01564-201ENST00000448327 PRR23BQ6ZRT6 265 aa5.92□□□□□ -1.46
LINC01564-201ENST00000448327 DISC1Q9NRI5 854 aa5.92□□□□□ -1.46
LINC01564-201ENST00000448327 CCDC87Q9NVE4 849 aa5.92□□□□□ -1.46
LINC01564-201ENST00000448327 CTNND2Q9UQB3 1225 aa5.92□□□□□ -1.46
LINC01564-201ENST00000448327 SNX11Q9Y5W9 270 aa5.92□□□□□ -1.46
LINC01564-201ENST00000448327 ITPKAP23677 461 aa5.91□□□□□ -1.46
LINC01564-201ENST00000448327 BUD31P41223 144 aaPredicted RBP5.91□□□□□ -1.46
LINC01564-201ENST00000448327 ZNF157P51786 506 aaPredicted RBP5.91□□□□□ -1.46
LINC01564-201ENST00000448327 GLI1P08151 1106 aa5.9□□□□□ -1.46
LINC01564-201ENST00000448327 C1QTNF9P0C862 333 aa5.9□□□□□ -1.46
LINC01564-201ENST00000448327 NPR3P17342 541 aa5.9□□□□□ -1.46
LINC01564-201ENST00000448327 KIAA0319Q5VV43 1072 aa5.9□□□□□ -1.46
LINC01564-201ENST00000448327 FYB2Q5VWT5 728 aa5.9□□□□□ -1.46
LINC01564-201ENST00000448327 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.9□□□□□ -1.46
LINC01564-201ENST00000448327 KIRREL1Q96J84 757 aa5.9□□□□□ -1.46
LINC01564-201ENST00000448327 TNKS2Q9H2K2 1166 aa5.9□□□□□ -1.46
LINC01564-201ENST00000448327 GTF2IRD1Q9UHL9 959 aa5.9□□□□□ -1.46
LINC01564-201ENST00000448327 MTMR7Q9Y216 660 aa5.9□□□□□ -1.46
LINC01564-201ENST00000448327 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.89□□□□□ -1.47
LINC01564-201ENST00000448327 ZNF862O60290 1169 aa5.89□□□□□ -1.47
LINC01564-201ENST00000448327 TMEM67Q5HYA8 995 aa5.89□□□□□ -1.47
LINC01564-201ENST00000448327 TTLL10Q6ZVT0 673 aa5.89□□□□□ -1.47
LINC01564-201ENST00000448327 ABL1P00519 1130 aa5.88□□□□□ -1.47
LINC01564-201ENST00000448327 NEFLP07196 543 aa5.88□□□□□ -1.47
LINC01564-201ENST00000448327 GSTP1P09211 210 aaKnown RBP5.88□□□□□ -1.47
LINC01564-201ENST00000448327 SF3B2Q13435 895 aaKnown RBP5.88□□□□□ -1.47
LINC01564-201ENST00000448327 KIF4BQ2VIQ3 1234 aa5.88□□□□□ -1.47
LINC01564-201ENST00000448327 USPL1Q5W0Q7 1092 aa5.88□□□□□ -1.47
LINC01564-201ENST00000448327 CYFIP1Q7L576 1253 aa5.88□□□□□ -1.47
LINC01564-201ENST00000448327 FBXO15Q8NCQ5 510 aaPredicted RBP5.88□□□□□ -1.47
LINC01564-201ENST00000448327 KCNB2Q92953 911 aa5.88□□□□□ -1.47
LINC01564-201ENST00000448327 DIRC2Q96SL1 478 aa5.88□□□□□ -1.47
LINC01564-201ENST00000448327 NPHS2Q9NP85 383 aa5.88□□□□□ -1.47
LINC01564-201ENST00000448327 GNAT3A8MTJ3 354 aa5.87□□□□□ -1.47
LINC01564-201ENST00000448327 NPIPB6E9PJ23 425 aa5.87□□□□□ -1.47
LINC01564-201ENST00000448327 FKBP4Q02790 459 aaKnown RBP eCLIP5.87□□□□□ -1.47
LINC01564-201ENST00000448327 PTPN12Q05209 780 aaKnown RBP5.87□□□□□ -1.47
LINC01564-201ENST00000448327 ISL2Q96A47 359 aa5.87□□□□□ -1.47
LINC01564-201ENST00000448327 HEXIM2Q96MH2 286 aaKnown RBP5.87□□□□□ -1.47
LINC01564-201ENST00000448327 NSUN3Q9H649 340 aaKnown RBP5.87□□□□□ -1.47
LINC01564-201ENST00000448327 ANO2Q9NQ90 1003 aa5.87□□□□□ -1.47
LINC01564-201ENST00000448327 KRT82Q9NSB4 513 aa5.87□□□□□ -1.47
LINC01564-201ENST00000448327 RAPGEFL1Q9UHV5 662 aa5.87□□□□□ -1.47
LINC01564-201ENST00000448327 PCDHGC5Q9Y5F6 944 aa5.87□□□□□ -1.47
LINC01564-201ENST00000448327 NEFMP07197 916 aa5.86□□□□□ -1.47
LINC01564-201ENST00000448327 INHBBP09529 407 aa5.86□□□□□ -1.47
LINC01564-201ENST00000448327 TMEM253P0C7T8 217 aa5.86□□□□□ -1.47
LINC01564-201ENST00000448327 SSFA2P28290 1259 aa5.86□□□□□ -1.47
LINC01564-201ENST00000448327 CTSWP56202 376 aa5.86□□□□□ -1.47
LINC01564-201ENST00000448327 RPS26P11Q5JNZ5 115 aaPredicted RBP5.86□□□□□ -1.47
LINC01564-201ENST00000448327 SPACA3Q8IXA5 215 aa5.86□□□□□ -1.47
LINC01564-201ENST00000448327 ABCB6Q9NP58 842 aa5.86□□□□□ -1.47
LINC01564-201ENST00000448327 GADD45BO75293 160 aaPredicted RBP5.85□□□□□ -1.47
LINC01564-201ENST00000448327 ZNF211Q13398 564 aaPredicted RBP5.85□□□□□ -1.47
LINC01564-201ENST00000448327 CIAPIN1Q6FI81 312 aa5.85□□□□□ -1.47
LINC01564-201ENST00000448327 CCDC97Q96F63 343 aaPredicted RBP5.85□□□□□ -1.47
LINC01564-201ENST00000448327 GPN3Q9UHW5 284 aaPredicted RBP5.85□□□□□ -1.47
LINC01564-201ENST00000448327 IGF2BP3O00425 579 aaKnown RBP eCLIP5.84□□□□□ -1.47
LINC01564-201ENST00000448327 CPNE3O75131 537 aaKnown RBP5.84□□□□□ -1.47
LINC01564-201ENST00000448327 CLCN7P51798 805 aa5.84□□□□□ -1.47
LINC01564-201ENST00000448327 PPP2R3AQ06190 1150 aa5.84□□□□□ -1.47
LINC01564-201ENST00000448327 FAAP100Q0VG06 881 aa5.84□□□□□ -1.47
LINC01564-201ENST00000448327 RNF214Q8ND24 703 aa5.84□□□□□ -1.47
LINC01564-201ENST00000448327 CARS2Q9HA77 564 aaKnown RBP5.84□□□□□ -1.47
LINC01564-201ENST00000448327 PRDM10Q9NQV6 1147 aa5.84□□□□□ -1.47
LINC01564-201ENST00000448327 PICK1Q9NRD5 415 aa5.84□□□□□ -1.47
LINC01564-201ENST00000448327 BRPF3Q9ULD4 1205 aa5.84□□□□□ -1.47
LINC01564-201ENST00000448327 PITPNM2Q9BZ72 1349 aa5.83□□□□□ -1.48
LINC01564-201ENST00000448327 TMEM238LA0A1B0GVL6 79 aa5.83□□□□□ -1.48
LINC01564-201ENST00000448327 TCAF2A6NFQ2 919 aa5.83□□□□□ -1.48
LINC01564-201ENST00000448327 KRT1P04264 644 aa5.83□□□□□ -1.48
LINC01564-201ENST00000448327 ORC1Q13415 861 aa5.83□□□□□ -1.48
LINC01564-201ENST00000448327 KCNA10Q16322 511 aa5.83□□□□□ -1.48
LINC01564-201ENST00000448327 NKPD1Q17RQ9 610 aa5.83□□□□□ -1.48
LINC01564-201ENST00000448327 PRPF40BQ6NWY9 871 aaKnown RBP5.83□□□□□ -1.48
LINC01564-201ENST00000448327 AMIGO3Q86WK7 504 aa5.83□□□□□ -1.48
LINC01564-201ENST00000448327 DCP1AQ9NPI6 582 aaPredicted RBP5.83□□□□□ -1.48
LINC01564-201ENST00000448327 TRAK1Q9UPV9 953 aa5.83□□□□□ -1.48
LINC01564-201ENST00000448327 DTHD1Q6ZMT9 781 aa5.82□□□□□ -1.48
LINC01564-201ENST00000448327 ATG14Q6ZNE5 492 aa5.82□□□□□ -1.48
LINC01564-201ENST00000448327 ACSBG1Q96GR2 724 aa5.82□□□□□ -1.48
LINC01564-201ENST00000448327 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
LINC01564-201ENST00000448327 EPB41L4BQ9H329 900 aa5.82□□□□□ -1.48
LINC01564-201ENST00000448327 TMEM39AQ9NV64 488 aa5.82□□□□□ -1.48
LINC01564-201ENST00000448327 NUAK1O60285 661 aa5.81□□□□□ -1.48
LINC01564-201ENST00000448327 GDNFP39905 211 aa5.81□□□□□ -1.48
LINC01564-201ENST00000448327 ERVK-24P63145 666 aa5.81□□□□□ -1.48
LINC01564-201ENST00000448327 ZC3H12AQ5D1E8 599 aaKnown RBP5.81□□□□□ -1.48
LINC01564-201ENST00000448327 MAP1SQ66K74 1059 aaPredicted RBP5.81□□□□□ -1.48
LINC01564-201ENST00000448327 FAM214BQ7L5A3 538 aa5.81□□□□□ -1.48
LINC01564-201ENST00000448327 FOXQ1Q9C009 403 aa5.81□□□□□ -1.48
LINC01564-201ENST00000448327 PRDM5Q9NQX1 630 aaPredicted RBP5.81□□□□□ -1.48
LINC01564-201ENST00000448327 FAM155AB1AL88 458 aaPredicted RBP5.8□□□□□ -1.48
LINC01564-201ENST00000448327 PDZD3Q86UT5 571 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms