RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 USP17L21D6R901 530 aa23.22■■□□□ 1.31
SGCE-207ENST00000447873 WNT10BO00744 389 aa23.22■■□□□ 1.31
SGCE-207ENST00000447873 LMOD1P29536 600 aaPredicted RBP23.22■■□□□ 1.31
SGCE-207ENST00000447873 CACNB3P54284 484 aa23.22■■□□□ 1.31
SGCE-207ENST00000447873 KRT32Q14532 448 aa23.22■■□□□ 1.31
SGCE-207ENST00000447873 TSGA10IPQ3SY00 556 aa23.22■■□□□ 1.31
SGCE-207ENST00000447873 CTR9Q6PD62 1173 aa23.22■■□□□ 1.31
SGCE-207ENST00000447873 SAMD7Q7Z3H4 446 aa23.22■■□□□ 1.31
SGCE-207ENST00000447873 AMOTL1Q8IY63 956 aa23.22■■□□□ 1.31
SGCE-207ENST00000447873 ZBED3Q96IU2 234 aaPredicted RBP23.22■■□□□ 1.31
SGCE-207ENST00000447873 KIF2CQ99661 725 aa23.22■■□□□ 1.31
SGCE-207ENST00000447873 TBC1D10BQ4KMP7 808 aaPredicted RBP23.21■■□□□ 1.31
SGCE-207ENST00000447873 IDI2Q9BXS1 227 aa23.21■■□□□ 1.31
SGCE-207ENST00000447873 TAF6LQ9Y6J9 622 aa23.21■■□□□ 1.31
SGCE-207ENST00000447873 LAMB1P07942 1786 aa23.21■■□□□ 1.31
SGCE-207ENST00000447873 GLTPD2A6NH11 291 aa23.2■■□□□ 1.3
SGCE-207ENST00000447873 EGFRP00533 1210 aa23.2■■□□□ 1.3
SGCE-207ENST00000447873 PPARAQ07869 468 aa23.2■■□□□ 1.3
SGCE-207ENST00000447873 NFIAQ12857 509 aa23.2■■□□□ 1.3
SGCE-207ENST00000447873 KIF4BQ2VIQ3 1234 aa23.2■■□□□ 1.3
SGCE-207ENST00000447873 NBPF9Q3BBW0 867 aa23.2■■□□□ 1.3
SGCE-207ENST00000447873 SBK1Q52WX2 424 aa23.2■■□□□ 1.3
SGCE-207ENST00000447873 IL17RAQ96F46 866 aa23.2■■□□□ 1.3
SGCE-207ENST00000447873 DDX4Q9NQI0 724 aaKnown RBP23.2■■□□□ 1.3
SGCE-207ENST00000447873 ZNF70Q9UC06 446 aaPredicted RBP23.2■■□□□ 1.3
SGCE-207ENST00000447873 SAP30BPQ9UHR5 308 aaKnown RBP23.2■■□□□ 1.3
SGCE-207ENST00000447873 CLRN2A0PK11 232 aa23.19■■□□□ 1.3
SGCE-207ENST00000447873 POLR3DP05423 398 aaPredicted RBP23.19■■□□□ 1.3
SGCE-207ENST00000447873 EPS15P42566 896 aa23.19■■□□□ 1.3
SGCE-207ENST00000447873 SPDYE2Q495Y8 402 aa23.19■■□□□ 1.3
SGCE-207ENST00000447873 DDX60LQ5H9U9 1706 aaKnown RBP23.19■■□□□ 1.3
SGCE-207ENST00000447873 CYP2D7A0A087X1C5 515 aa23.18■■□□□ 1.3
SGCE-207ENST00000447873 CTDSPL2Q05D32 466 aa23.18■■□□□ 1.3
SGCE-207ENST00000447873 ADCK5Q3MIX3 580 aa23.18■■□□□ 1.3
SGCE-207ENST00000447873 JAKMIP1Q96N16 626 aaKnown RBP23.18■■□□□ 1.3
SGCE-207ENST00000447873 OSBPL5Q9H0X9 879 aaPredicted RBP23.18■■□□□ 1.3
SGCE-207ENST00000447873 VEZTQ9HBM0 779 aa23.18■■□□□ 1.3
SGCE-207ENST00000447873 ANAPC4Q9UJX5 808 aa23.18■■□□□ 1.3
SGCE-207ENST00000447873 E7EWF7 191 aa23.18■■□□□ 1.3
SGCE-207ENST00000447873 NPM3O75607 178 aaKnown RBP23.18■■□□□ 1.3
SGCE-207ENST00000447873 RABEP1Q15276 862 aa23.18■■□□□ 1.3
SGCE-207ENST00000447873 SLC4A8Q2Y0W8 1093 aa23.18■■□□□ 1.3
SGCE-207ENST00000447873 L3MBTL3Q96JM7 780 aaPredicted RBP23.18■■□□□ 1.3
SGCE-207ENST00000447873 FAM198AQ9UFP1 575 aa23.18■■□□□ 1.3
SGCE-207ENST00000447873 SLC3A2P08195 630 aaKnown RBP23.17■■□□□ 1.3
SGCE-207ENST00000447873 CYP2D6P10635 497 aa23.17■■□□□ 1.3
SGCE-207ENST00000447873 PSMA5P28066 241 aa23.17■■□□□ 1.3
SGCE-207ENST00000447873 TCP10Q12799 353 aa23.17■■□□□ 1.3
SGCE-207ENST00000447873 C12orf60Q5U649 245 aa23.17■■□□□ 1.3
SGCE-207ENST00000447873 NBPF3Q9H094 633 aa23.17■■□□□ 1.3
SGCE-207ENST00000447873 ENTPD3O75355 529 aa23.16■■□□□ 1.3
SGCE-207ENST00000447873 CASTP20810 708 aaKnown RBP23.16■■□□□ 1.3
SGCE-207ENST00000447873 FKBP1CQ5VVH2 108 aa23.16■■□□□ 1.3
SGCE-207ENST00000447873 STOX1Q6ZVD7 989 aa23.16■■□□□ 1.3
SGCE-207ENST00000447873 TBC1D10CQ8IV04 446 aa23.16■■□□□ 1.3
SGCE-207ENST00000447873 NEK1Q96PY6 1258 aa23.16■■□□□ 1.3
SGCE-207ENST00000447873 TM6SF1Q9BZW5 370 aa23.16■■□□□ 1.3
SGCE-207ENST00000447873 ADARB2Q9NS39 739 aaKnown RBP23.16■■□□□ 1.3
SGCE-207ENST00000447873 TCP10L2B9ZVM9 353 aa23.15■■□□□ 1.3
SGCE-207ENST00000447873 TRDNQ13061 729 aa23.15■■□□□ 1.3
SGCE-207ENST00000447873 AKNAD1Q5T1N1 836 aa23.15■■□□□ 1.3
SGCE-207ENST00000447873 MFSD6Q6ZSS7 791 aa23.15■■□□□ 1.3
SGCE-207ENST00000447873 TTC6Q86TZ1 520 aa23.15■■□□□ 1.3
SGCE-207ENST00000447873 STK11IPQ8N1F8 1099 aa23.15■■□□□ 1.3
SGCE-207ENST00000447873 RNF41Q9H4P4 317 aaPredicted RBP23.15■■□□□ 1.3
SGCE-207ENST00000447873 ANP32AP39687 249 aaKnown RBP23.14■■□□□ 1.3
SGCE-207ENST00000447873 ZFPM1Q8IX07 1006 aa23.14■■□□□ 1.3
SGCE-207ENST00000447873 TRPM4Q8TD43 1214 aa23.14■■□□□ 1.3
SGCE-207ENST00000447873 UPF3BQ9BZI7 483 aaKnown RBP23.14■■□□□ 1.3
SGCE-207ENST00000447873 SMIM22K7EJ46 135 aa23.14■■□□□ 1.29
SGCE-207ENST00000447873 PLCD1P51178 756 aa23.14■■□□□ 1.29
SGCE-207ENST00000447873 BLOC1S2Q6QNY1 142 aa23.14■■□□□ 1.29
SGCE-207ENST00000447873 RALYLQ86SE5 291 aaKnown RBP23.14■■□□□ 1.29
SGCE-207ENST00000447873 ZSCAN29Q8IWY8 852 aaPredicted RBP23.14■■□□□ 1.29
SGCE-207ENST00000447873 NCOA7Q8NI08 942 aa23.14■■□□□ 1.29
SGCE-207ENST00000447873 STAG1Q8WVM7 1258 aa23.14■■□□□ 1.29
SGCE-207ENST00000447873 DHX36Q9H2U1 1008 aaKnown RBP23.14■■□□□ 1.29
SGCE-207ENST00000447873 ZSWIM6Q9HCJ5 1215 aa23.14■■□□□ 1.29
SGCE-207ENST00000447873 HACL1Q9UJ83 578 aa23.14■■□□□ 1.29
SGCE-207ENST00000447873 SCN4AP35499 1836 aa23.13■■□□□ 1.29
SGCE-207ENST00000447873 HLA-DOAP06340 250 aa23.13■■□□□ 1.29
SGCE-207ENST00000447873 HMGB1P09429 215 aaKnown RBP23.13■■□□□ 1.29
SGCE-207ENST00000447873 TNNI2P48788 182 aa23.13■■□□□ 1.29
SGCE-207ENST00000447873 NEK4P51957 841 aa23.13■■□□□ 1.29
SGCE-207ENST00000447873 EVX2Q03828 476 aa23.13■■□□□ 1.29
SGCE-207ENST00000447873 CNNM2Q9H8M5 875 aa23.13■■□□□ 1.29
SGCE-207ENST00000447873 CYP46A1Q9Y6A2 500 aa23.13■■□□□ 1.29
SGCE-207ENST00000447873 PDE4BQ07343 736 aa23.12■■□□□ 1.29
SGCE-207ENST00000447873 RUFY3Q7L099 469 aa23.12■■□□□ 1.29
SGCE-207ENST00000447873 FAM83AQ86UY5 434 aa23.12■■□□□ 1.29
SGCE-207ENST00000447873 FAM151AQ8WW52 585 aa23.12■■□□□ 1.29
SGCE-207ENST00000447873 INCENPQ9NQS7 918 aa23.12■■□□□ 1.29
SGCE-207ENST00000447873 TOMM22Q9NS69 142 aa23.12■■□□□ 1.29
SGCE-207ENST00000447873 ROBO3Q96MS0 1386 aa23.11■■□□□ 1.29
SGCE-207ENST00000447873 ASTN2O75129 1339 aaPredicted RBP23.11■■□□□ 1.29
SGCE-207ENST00000447873 NEDD4P46934 1319 aa23.11■■□□□ 1.29
SGCE-207ENST00000447873 IQCA1LA6NCM1 817 aa23.11■■□□□ 1.29
SGCE-207ENST00000447873 PCP11498 1178 aaKnown RBP23.11■■□□□ 1.29
SGCE-207ENST00000447873 CPA1P15085 419 aa23.11■■□□□ 1.29
SGCE-207ENST00000447873 HIRAP54198 1017 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms