RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 CYP2D7A0A087X1C5 515 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 GSG1L2A8MUP6 293 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 MINDY4BA8MYZ0 360 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 IGSF3O75054 1194 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 CMA1P23946 247 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 NLRP12P59046 1061 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 NR5A1Q13285 461 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 ZNF827Q17R98 1081 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.91□□□□□ -0.66
KLHL3-202ENST00000447439 HSD3B7Q9H2F3 369 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 ABCF2Q9UG63 623 aa10.91□□□□□ -0.66
KLHL3-202ENST00000447439 BCL9O00512 1426 aa10.9□□□□□ -0.66
KLHL3-202ENST00000447439 AKAP11Q9UKA4 1901 aa10.9□□□□□ -0.66
KLHL3-202ENST00000447439 SMTNL1A8MU46 457 aa10.9□□□□□ -0.66
KLHL3-202ENST00000447439 EXOC5O00471 708 aa10.9□□□□□ -0.66
KLHL3-202ENST00000447439 CTIFO43310 598 aaKnown RBP10.9□□□□□ -0.66
KLHL3-202ENST00000447439 PTPN14Q15678 1187 aa10.9□□□□□ -0.66
KLHL3-202ENST00000447439 FOXP4Q8IVH2 680 aaPredicted RBP10.9□□□□□ -0.66
KLHL3-202ENST00000447439 ZNF34Q8IZ26 560 aa10.9□□□□□ -0.66
KLHL3-202ENST00000447439 OXER1Q8TDS5 423 aa10.9□□□□□ -0.66
KLHL3-202ENST00000447439 DDX60Q8IY21 1712 aaKnown RBP10.9□□□□□ -0.67
KLHL3-202ENST00000447439 FAM205CA6NFA0 338 aa10.9□□□□□ -0.67
KLHL3-202ENST00000447439 PATL2C9JE40 543 aaKnown RBP10.9□□□□□ -0.67
KLHL3-202ENST00000447439 TMEM232C9JQI7 657 aa10.9□□□□□ -0.67
KLHL3-202ENST00000447439 ADAMTS2O95450 1211 aa10.9□□□□□ -0.67
KLHL3-202ENST00000447439 SLC5A1P13866 664 aa10.9□□□□□ -0.67
KLHL3-202ENST00000447439 PDE4BQ07343 736 aa10.9□□□□□ -0.67
KLHL3-202ENST00000447439 TRIM29Q14134 588 aa10.9□□□□□ -0.67
KLHL3-202ENST00000447439 SLC4A8Q2Y0W8 1093 aa10.9□□□□□ -0.67
KLHL3-202ENST00000447439 METTL16Q86W50 562 aaKnown RBP10.9□□□□□ -0.67
KLHL3-202ENST00000447439 CCAR2Q8N163 923 aaKnown RBP10.9□□□□□ -0.67
KLHL3-202ENST00000447439 PDILTQ8N807 584 aa10.9□□□□□ -0.67
KLHL3-202ENST00000447439 PRDM1O75626 825 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 UQCRFS1P1P0C7P4 283 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 PRR29P0C7W0 189 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 ATP6V1AP38606 617 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 GYG1P46976 350 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 RBM6P78332 1123 aaKnown RBP10.89□□□□□ -0.67
KLHL3-202ENST00000447439 SSRP1Q08945 709 aaKnown RBP10.89□□□□□ -0.67
KLHL3-202ENST00000447439 MAP3K12Q12852 859 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 MFSD6Q6ZSS7 791 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 C3orf67Q6ZVT6 689 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 MTERF4Q7Z6M4 381 aaKnown RBP10.89□□□□□ -0.67
KLHL3-202ENST00000447439 LRRN4CLQ8ND94 238 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 ANKRD7Q92527 254 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 PKNOX2Q96KN3 472 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 LRP2BPQ9P2M1 347 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 ZNF215Q9UL58 517 aaPredicted RBP10.89□□□□□ -0.67
KLHL3-202ENST00000447439 TOB1P50616 345 aaPredicted RBP10.89□□□□□ -0.67
KLHL3-202ENST00000447439 FANCCQ00597 558 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 AKNAD1Q5T1N1 836 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 E4F1Q66K89 784 aaPredicted RBP10.89□□□□□ -0.67
KLHL3-202ENST00000447439 INTS5Q6P9B9 1019 aaKnown RBP10.89□□□□□ -0.67
KLHL3-202ENST00000447439 USP49Q70CQ1 688 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 CCDC24Q8N4L8 307 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 TMX1Q9H3N1 280 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 C4AP0C0L4 1744 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 C4BP0C0L5 1744 aa10.89□□□□□ -0.67
KLHL3-202ENST00000447439 CDKL5O76039 1030 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 BMP6P22004 513 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 CRKLP46109 303 aaKnown RBP10.88□□□□□ -0.67
KLHL3-202ENST00000447439 CPLX2Q6PUV4 134 aaKnown RBP10.88□□□□□ -0.67
KLHL3-202ENST00000447439 BICDL1Q6ZP65 573 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 NYAP1Q6ZVC0 841 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 DIS3L2Q8IYB7 885 aaKnown RBP10.88□□□□□ -0.67
KLHL3-202ENST00000447439 TRMT44Q8IYL2 757 aaKnown RBP10.88□□□□□ -0.67
KLHL3-202ENST00000447439 JAG2Q9Y219 1238 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 NIP7Q9Y221 180 aaKnown RBP eCLIP10.88□□□□□ -0.67
KLHL3-202ENST00000447439 PCDHB6Q9Y5E3 794 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 PCDHA5Q9Y5H7 936 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 COL4A1P02462 1669 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 MROH5Q6ZUA9 1318 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 ABCC12Q96J65 1359 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 SERPINC1P01008 464 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 ITPK1Q13572 414 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 CNNM3Q8NE01 707 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 SHISA4Q96DD7 197 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 TMEM87BQ96K49 555 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 ZNF512BQ96KM6 892 aaPredicted RBP10.88□□□□□ -0.67
KLHL3-202ENST00000447439 FANCLQ9NW38 375 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 KCNH3Q9ULD8 1083 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 HPSEQ9Y251 543 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 MYH7P12883 1935 aa10.88□□□□□ -0.67
KLHL3-202ENST00000447439 ATRNO75882 1429 aa10.87□□□□□ -0.67
KLHL3-202ENST00000447439 WDR19Q8NEZ3 1342 aa10.87□□□□□ -0.67
KLHL3-202ENST00000447439 CYP7A1P22680 504 aa10.87□□□□□ -0.67
KLHL3-202ENST00000447439 CASP1P29466 404 aa10.87□□□□□ -0.67
KLHL3-202ENST00000447439 IL6STP40189 918 aaPredicted RBP10.87□□□□□ -0.67
KLHL3-202ENST00000447439 DYNLL1P63167 89 aaKnown RBP10.87□□□□□ -0.67
KLHL3-202ENST00000447439 CHRNDQ07001 517 aa10.87□□□□□ -0.67
KLHL3-202ENST00000447439 WTAPQ15007 396 aa10.87□□□□□ -0.67
KLHL3-202ENST00000447439 NOM1Q5C9Z4 860 aaKnown RBP10.87□□□□□ -0.67
KLHL3-202ENST00000447439 UTP14AQ9BVJ6 771 aaKnown RBP10.87□□□□□ -0.67
KLHL3-202ENST00000447439 ABCA3Q99758 1704 aa10.87□□□□□ -0.67
KLHL3-202ENST00000447439 LRP6O75581 1613 aa10.87□□□□□ -0.67
KLHL3-202ENST00000447439 COBLO75128 1261 aa10.87□□□□□ -0.67
KLHL3-202ENST00000447439 RTN1Q16799 776 aa10.87□□□□□ -0.67
KLHL3-202ENST00000447439 CFAP100Q494V2 611 aa10.87□□□□□ -0.67
KLHL3-202ENST00000447439 RESP18Q5W5W9 173 aa10.87□□□□□ -0.67
KLHL3-202ENST00000447439 SYT10Q6XYQ8 523 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms