RNA–Protein interactions for RNA: ENST00000445998.1

UBQLN3-202, Transcript of ubiquilin 3, humanhuman

TSL 3

Gene UBQLN3, Length 817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3-202ENST00000445998 TMEM39BQ9GZU3 492 aa16.54■□□□□ 0.24
UBQLN3-202ENST00000445998 PUS7LQ9H0K6 701 aaKnown RBP16.54■□□□□ 0.24
UBQLN3-202ENST00000445998 ZNF408Q9H9D4 720 aa16.54■□□□□ 0.24
UBQLN3-202ENST00000445998 DIAPH3Q9NSV4 1193 aa16.54■□□□□ 0.24
UBQLN3-202ENST00000445998 SCAF8Q9UPN6 1271 aaKnown RBP16.54■□□□□ 0.24
UBQLN3-202ENST00000445998 COL2A1P02458 1487 aaPredicted RBP16.54■□□□□ 0.24
UBQLN3-202ENST00000445998 GSPT1P15170 499 aaKnown RBP16.53■□□□□ 0.24
UBQLN3-202ENST00000445998 MCMDC2Q4G0Z9 681 aa16.53■□□□□ 0.24
UBQLN3-202ENST00000445998 ARMC9Q7Z3E5 817 aa16.53■□□□□ 0.24
UBQLN3-202ENST00000445998 AMOTL1Q8IY63 956 aa16.53■□□□□ 0.24
UBQLN3-202ENST00000445998 RUFY2Q8WXA3 655 aa16.53■□□□□ 0.24
UBQLN3-202ENST00000445998 TEPSINQ96N21 525 aa16.53■□□□□ 0.24
UBQLN3-202ENST00000445998 STRBPQ96SI9 672 aaKnown RBP16.53■□□□□ 0.24
UBQLN3-202ENST00000445998 OSBPL5Q9H0X9 879 aaPredicted RBP16.53■□□□□ 0.24
UBQLN3-202ENST00000445998 ARMT1Q9H993 441 aa16.53■□□□□ 0.24
UBQLN3-202ENST00000445998 GBA2Q9HCG7 927 aaPredicted RBP16.53■□□□□ 0.24
UBQLN3-202ENST00000445998 UNCXA6NJT0 531 aa16.52■□□□□ 0.24
UBQLN3-202ENST00000445998 HSPA6P17066 643 aa16.52■□□□□ 0.24
UBQLN3-202ENST00000445998 NBPF12Q5TAG4 269 aaPredicted RBP16.52■□□□□ 0.24
UBQLN3-202ENST00000445998 PRAMEF18Q5VWM3 479 aa16.52■□□□□ 0.24
UBQLN3-202ENST00000445998 CST9Q5W186 159 aa16.52■□□□□ 0.24
UBQLN3-202ENST00000445998 GIMAP6Q6P9H5 292 aa16.52■□□□□ 0.24
UBQLN3-202ENST00000445998 TTC6Q86TZ1 520 aa16.52■□□□□ 0.24
UBQLN3-202ENST00000445998 LCORLQ8N3X6 602 aa16.52■□□□□ 0.24
UBQLN3-202ENST00000445998 DDX4Q9NQI0 724 aaKnown RBP16.52■□□□□ 0.24
UBQLN3-202ENST00000445998 CREBZFQ9NS37 354 aa16.52■□□□□ 0.24
UBQLN3-202ENST00000445998 PI4KBQ9UBF8 816 aa16.52■□□□□ 0.24
UBQLN3-202ENST00000445998 SLC4A4Q9Y6R1 1079 aa16.52■□□□□ 0.24
UBQLN3-202ENST00000445998 ATRNL1Q5VV63 1379 aa16.51■□□□□ 0.23
UBQLN3-202ENST00000445998 FLT1P17948 1338 aa16.51■□□□□ 0.23
UBQLN3-202ENST00000445998 GPAA1O43292 621 aa16.51■□□□□ 0.23
UBQLN3-202ENST00000445998 HLA-DOAP06340 250 aa16.51■□□□□ 0.23
UBQLN3-202ENST00000445998 TTLL12Q14166 644 aaPredicted RBP16.51■□□□□ 0.23
UBQLN3-202ENST00000445998 SLFNL1Q499Z3 407 aa16.51■□□□□ 0.23
UBQLN3-202ENST00000445998 FOXP4Q8IVH2 680 aaPredicted RBP16.51■□□□□ 0.23
UBQLN3-202ENST00000445998 MAPKAPK5Q8IW41 473 aa16.51■□□□□ 0.23
UBQLN3-202ENST00000445998 CSRNP1Q96S65 589 aa16.51■□□□□ 0.23
UBQLN3-202ENST00000445998 NACAP1Q9BZK3 213 aa16.51■□□□□ 0.23
UBQLN3-202ENST00000445998 TAOK2Q9UL54 1235 aa16.51■□□□□ 0.23
UBQLN3-202ENST00000445998 PATL2C9JE40 543 aaKnown RBP16.5■□□□□ 0.23
UBQLN3-202ENST00000445998 TBC1D12O60347 775 aa16.5■□□□□ 0.23
UBQLN3-202ENST00000445998 IREB2P48200 963 aaKnown RBP16.5■□□□□ 0.23
UBQLN3-202ENST00000445998 FMR1Q06787 632 aaKnown RBP eCLIP16.5■□□□□ 0.23
UBQLN3-202ENST00000445998 CASC1Q6TDU7 716 aa16.5■□□□□ 0.23
UBQLN3-202ENST00000445998 PAPPA2Q9BXP8 1791 aa16.5■□□□□ 0.23
UBQLN3-202ENST00000445998 BAZ2AQ9UIF9 1905 aaKnown RBP16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 M0R2C6 588 aa16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 CHGBP05060 677 aa16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 APPP05067 770 aa16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 POLR3DP05423 398 aaPredicted RBP16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 NMIQ13287 307 aaPredicted RBP16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 MAP3K11Q16584 847 aa16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 CWC27Q6UX04 472 aaKnown RBP16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 DLK2Q6UY11 383 aa16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 ZFPM1Q8IX07 1006 aa16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 NAV1Q8NEY1 1877 aa16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 HHIPL1Q96JK4 782 aa16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 TRIM34Q9BYJ4 488 aa16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 ZNF341Q9BYN7 854 aa16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 DCP1AQ9NPI6 582 aaPredicted RBP16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 MCM9Q9NXL9 1143 aa16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 HERC5Q9UII4 1024 aaKnown RBP16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 ABT1Q9ULW3 272 aaKnown RBP16.49■□□□□ 0.23
UBQLN3-202ENST00000445998 DDTLA6NHG4 134 aaPredicted RBP16.48■□□□□ 0.23
UBQLN3-202ENST00000445998 MAP3K10Q02779 954 aa16.48■□□□□ 0.23
UBQLN3-202ENST00000445998 SDR42E1Q8WUS8 393 aa16.48■□□□□ 0.23
UBQLN3-202ENST00000445998 FAM227BQ96M60 508 aa16.48■□□□□ 0.23
UBQLN3-202ENST00000445998 SEC62Q99442 399 aaKnown RBP16.48■□□□□ 0.23
UBQLN3-202ENST00000445998 MKRN1Q9UHC7 482 aaKnown RBP16.48■□□□□ 0.23
UBQLN3-202ENST00000445998 PALD1Q9ULE6 856 aa16.48■□□□□ 0.23
UBQLN3-202ENST00000445998 ANGEL1Q9UNK9 670 aaKnown RBP16.48■□□□□ 0.23
UBQLN3-202ENST00000445998 TLL2Q9Y6L7 1015 aa16.48■□□□□ 0.23
UBQLN3-202ENST00000445998 RAD50Q92878 1312 aa16.47■□□□□ 0.23
UBQLN3-202ENST00000445998 A0A0D9SFI3 127 aa16.47■□□□□ 0.23
UBQLN3-202ENST00000445998 GSG1L2A8MUP6 293 aa16.47■□□□□ 0.23
UBQLN3-202ENST00000445998 USP2O75604 605 aaPredicted RBP16.47■□□□□ 0.23
UBQLN3-202ENST00000445998 CHMLP26374 656 aa16.47■□□□□ 0.23
UBQLN3-202ENST00000445998 SH3BP5LQ7L8J4 393 aa16.47■□□□□ 0.23
UBQLN3-202ENST00000445998 SAPCD2Q86UD0 394 aa16.47■□□□□ 0.23
UBQLN3-202ENST00000445998 CRACR2BQ8N4Y2 399 aaPredicted RBP16.47■□□□□ 0.23
UBQLN3-202ENST00000445998 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.47■□□□□ 0.23
UBQLN3-202ENST00000445998 ARPP21Q9UBL0 812 aaPredicted RBP16.47■□□□□ 0.23
UBQLN3-202ENST00000445998 CCDC171Q6TFL3 1326 aa16.46■□□□□ 0.23
UBQLN3-202ENST00000445998 PRKAB2O43741 272 aa16.46■□□□□ 0.23
UBQLN3-202ENST00000445998 HUNKP57058 714 aa16.46■□□□□ 0.23
UBQLN3-202ENST00000445998 MAP3K9P80192 1104 aa16.46■□□□□ 0.23
UBQLN3-202ENST00000445998 PRKG1Q13976 671 aa16.46■□□□□ 0.23
UBQLN3-202ENST00000445998 DEFB115Q30KQ5 88 aa16.46■□□□□ 0.23
UBQLN3-202ENST00000445998 SBK1Q52WX2 424 aa16.46■□□□□ 0.23
UBQLN3-202ENST00000445998 ANKRD13AQ8IZ07 590 aa16.46■□□□□ 0.23
UBQLN3-202ENST00000445998 EHD4Q9H223 541 aa16.46■□□□□ 0.23
UBQLN3-202ENST00000445998 SAP30BPQ9UHR5 308 aaKnown RBP16.46■□□□□ 0.23
UBQLN3-202ENST00000445998 GTF3C3Q9Y5Q9 886 aa16.46■□□□□ 0.23
UBQLN3-202ENST00000445998 TDO2P48775 406 aa16.45■□□□□ 0.22
UBQLN3-202ENST00000445998 ALX1Q15699 326 aa16.45■□□□□ 0.22
UBQLN3-202ENST00000445998 LDLRAD1Q5T700 205 aa16.45■□□□□ 0.22
UBQLN3-202ENST00000445998 MIGA2Q7L4E1 593 aa16.45■□□□□ 0.22
UBQLN3-202ENST00000445998 METTL16Q86W50 562 aaKnown RBP16.45■□□□□ 0.22
UBQLN3-202ENST00000445998 SKAP1Q86WV1 359 aa16.45■□□□□ 0.22
UBQLN3-202ENST00000445998 IFNL3Q8IZI9 196 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms