RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 MYH1P12882 1939 aa15.74■□□□□ 0.11
TIMP1-204ENST00000445623 ASTN2O75129 1339 aaPredicted RBP15.74■□□□□ 0.11
TIMP1-204ENST00000445623 COL2A1P02458 1487 aaPredicted RBP15.74■□□□□ 0.11
TIMP1-204ENST00000445623 PRKAB2O43741 272 aa15.74■□□□□ 0.11
TIMP1-204ENST00000445623 REC8O95072 547 aa15.74■□□□□ 0.11
TIMP1-204ENST00000445623 HSPD1P10809 573 aaKnown RBP15.74■□□□□ 0.11
TIMP1-204ENST00000445623 TDO2P48775 406 aa15.74■□□□□ 0.11
TIMP1-204ENST00000445623 TCP10Q12799 353 aa15.74■□□□□ 0.11
TIMP1-204ENST00000445623 NFIAQ12857 509 aa15.74■□□□□ 0.11
TIMP1-204ENST00000445623 CDC37L1Q7L3B6 337 aa15.74■□□□□ 0.11
TIMP1-204ENST00000445623 KRT26Q7Z3Y9 468 aa15.74■□□□□ 0.11
TIMP1-204ENST00000445623 ZNF784Q8NCA9 323 aaPredicted RBP15.74■□□□□ 0.11
TIMP1-204ENST00000445623 DSCC1Q9BVC3 393 aa15.74■□□□□ 0.11
TIMP1-204ENST00000445623 NAPBQ9H115 298 aa15.74■□□□□ 0.11
TIMP1-204ENST00000445623 DHX36Q9H2U1 1008 aaKnown RBP15.74■□□□□ 0.11
TIMP1-204ENST00000445623 DCP1AQ9NPI6 582 aaPredicted RBP15.74■□□□□ 0.11
TIMP1-204ENST00000445623 ANO2Q9NQ90 1003 aa15.74■□□□□ 0.11
TIMP1-204ENST00000445623 FAM198AQ9UFP1 575 aa15.74■□□□□ 0.11
TIMP1-204ENST00000445623 GSG1L2A8MUP6 293 aa15.73■□□□□ 0.11
TIMP1-204ENST00000445623 HLA-DOAP06340 250 aa15.73■□□□□ 0.11
TIMP1-204ENST00000445623 RASA3Q14644 834 aa15.73■□□□□ 0.11
TIMP1-204ENST00000445623 CHADLQ6NUI6 762 aa15.73■□□□□ 0.11
TIMP1-204ENST00000445623 ZSCAN29Q8IWY8 852 aaPredicted RBP15.73■□□□□ 0.11
TIMP1-204ENST00000445623 IFNL3Q8IZI9 196 aa15.73■□□□□ 0.11
TIMP1-204ENST00000445623 HOOK2Q96ED9 719 aa15.73■□□□□ 0.11
TIMP1-204ENST00000445623 DEFB129Q9H1M3 183 aa15.73■□□□□ 0.11
TIMP1-204ENST00000445623 DDX4Q9NQI0 724 aaKnown RBP15.73■□□□□ 0.11
TIMP1-204ENST00000445623 MCM9Q9NXL9 1143 aa15.73■□□□□ 0.11
TIMP1-204ENST00000445623 ARPP21Q9UBL0 812 aaPredicted RBP15.73■□□□□ 0.11
TIMP1-204ENST00000445623 BAZ2AQ9UIF9 1905 aaKnown RBP15.72■□□□□ 0.11
TIMP1-204ENST00000445623 ZMYM6O95789 1325 aa15.72■□□□□ 0.11
TIMP1-204ENST00000445623 DDX60LQ5H9U9 1706 aaKnown RBP15.72■□□□□ 0.11
TIMP1-204ENST00000445623 KIF3CO14782 793 aa15.72■□□□□ 0.11
TIMP1-204ENST00000445623 POLR3DP05423 398 aaPredicted RBP15.72■□□□□ 0.11
TIMP1-204ENST00000445623 POTEIP0CG38 1075 aa15.72■□□□□ 0.11
TIMP1-204ENST00000445623 POTEJP0CG39 1038 aa15.72■□□□□ 0.11
TIMP1-204ENST00000445623 ALX1Q15699 326 aa15.72■□□□□ 0.11
TIMP1-204ENST00000445623 VPS53Q5VIR6 699 aa15.72■□□□□ 0.11
TIMP1-204ENST00000445623 TTC6Q86TZ1 520 aa15.72■□□□□ 0.11
TIMP1-204ENST00000445623 IL25Q9H293 177 aa15.72■□□□□ 0.11
TIMP1-204ENST00000445623 CTNNA3Q9UI47 895 aa15.72■□□□□ 0.11
TIMP1-204ENST00000445623 CNTNAP1P78357 1384 aa15.72■□□□□ 0.11
TIMP1-204ENST00000445623 ATRNL1Q5VV63 1379 aa15.72■□□□□ 0.11
TIMP1-204ENST00000445623 LAMB1P07942 1786 aa15.72■□□□□ 0.11
TIMP1-204ENST00000445623 NF2P35240 595 aa15.71■□□□□ 0.11
TIMP1-204ENST00000445623 MAP1SQ66K74 1059 aaPredicted RBP15.71■□□□□ 0.11
TIMP1-204ENST00000445623 TMEM39BQ9GZU3 492 aa15.71■□□□□ 0.11
TIMP1-204ENST00000445623 EPB41L4AQ9HCS5 686 aaPredicted RBP15.71■□□□□ 0.11
TIMP1-204ENST00000445623 MKRN1Q9UHC7 482 aaKnown RBP15.71■□□□□ 0.11
TIMP1-204ENST00000445623 SAP30BPQ9UHR5 308 aaKnown RBP15.71■□□□□ 0.11
TIMP1-204ENST00000445623 U3KPZ7 1027 aaPredicted RBP15.71■□□□□ 0.11
TIMP1-204ENST00000445623 EPB41L2O43491 1005 aaKnown RBP15.7■□□□□ 0.1
TIMP1-204ENST00000445623 SUPT20HL1Q3ZLR7 823 aa15.7■□□□□ 0.1
TIMP1-204ENST00000445623 C8orf34Q49A92 452 aa15.7■□□□□ 0.1
TIMP1-204ENST00000445623 SBK1Q52WX2 424 aa15.7■□□□□ 0.1
TIMP1-204ENST00000445623 USP48Q86UV5 1035 aa15.7■□□□□ 0.1
TIMP1-204ENST00000445623 SMC1BQ8NDV3 1235 aa15.7■□□□□ 0.1
TIMP1-204ENST00000445623 RBM46Q8TBY0 533 aaKnown RBP15.7■□□□□ 0.1
TIMP1-204ENST00000445623 CSRNP1Q96S65 589 aa15.7■□□□□ 0.1
TIMP1-204ENST00000445623 TRIM34Q9BYJ4 488 aa15.7■□□□□ 0.1
TIMP1-204ENST00000445623 PI4KBQ9UBF8 816 aa15.7■□□□□ 0.1
TIMP1-204ENST00000445623 USP17L12C9JPN9 530 aa15.69■□□□□ 0.1
TIMP1-204ENST00000445623 ADM5C9JUS6 153 aa15.69■□□□□ 0.1
TIMP1-204ENST00000445623 USP17L21D6R901 530 aa15.69■□□□□ 0.1
TIMP1-204ENST00000445623 TOMM70O94826 608 aa15.69■□□□□ 0.1
TIMP1-204ENST00000445623 FGAP02671 866 aa15.69■□□□□ 0.1
TIMP1-204ENST00000445623 SLC3A2P08195 630 aaKnown RBP15.69■□□□□ 0.1
TIMP1-204ENST00000445623 IMMTQ16891 758 aaKnown RBP15.69■□□□□ 0.1
TIMP1-204ENST00000445623 MAP4K1Q92918 833 aa15.69■□□□□ 0.1
TIMP1-204ENST00000445623 GLIS2Q9BZE0 524 aaPredicted RBP15.69■□□□□ 0.1
TIMP1-204ENST00000445623 LSG1Q9H089 658 aaKnown RBP15.69■□□□□ 0.1
TIMP1-204ENST00000445623 TAOK2Q9UL54 1235 aa15.69■□□□□ 0.1
TIMP1-204ENST00000445623 PALD1Q9ULE6 856 aa15.69■□□□□ 0.1
TIMP1-204ENST00000445623 SCAF8Q9UPN6 1271 aaKnown RBP15.69■□□□□ 0.1
TIMP1-204ENST00000445623 LAMA4Q16363 1823 aa15.68■□□□□ 0.1
TIMP1-204ENST00000445623 DDTLA6NHG4 134 aaPredicted RBP15.68■□□□□ 0.1
TIMP1-204ENST00000445623 MINDY4BA8MYZ0 360 aa15.68■□□□□ 0.1
TIMP1-204ENST00000445623 FOXP2O15409 715 aa15.68■□□□□ 0.1
TIMP1-204ENST00000445623 PTH1RQ03431 593 aa15.68■□□□□ 0.1
TIMP1-204ENST00000445623 DCAF15Q66K64 600 aa15.68■□□□□ 0.1
TIMP1-204ENST00000445623 CTR9Q6PD62 1173 aa15.68■□□□□ 0.1
TIMP1-204ENST00000445623 ZFPM1Q8IX07 1006 aa15.68■□□□□ 0.1
TIMP1-204ENST00000445623 CRACR2BQ8N4Y2 399 aaPredicted RBP15.68■□□□□ 0.1
TIMP1-204ENST00000445623 EHD4Q9H223 541 aa15.68■□□□□ 0.1
TIMP1-204ENST00000445623 ZNF213O14771 459 aa15.67■□□□□ 0.1
TIMP1-204ENST00000445623 MCCP23508 829 aa15.67■□□□□ 0.1
TIMP1-204ENST00000445623 PPARAQ07869 468 aa15.67■□□□□ 0.1
TIMP1-204ENST00000445623 C12orf60Q5U649 245 aa15.67■□□□□ 0.1
TIMP1-204ENST00000445623 RNF20Q5VTR2 975 aa15.67■□□□□ 0.1
TIMP1-204ENST00000445623 SH3BP5LQ7L8J4 393 aa15.67■□□□□ 0.1
TIMP1-204ENST00000445623 FOXP4Q8IVH2 680 aaPredicted RBP15.67■□□□□ 0.1
TIMP1-204ENST00000445623 CDCA5Q96FF9 252 aa15.67■□□□□ 0.1
TIMP1-204ENST00000445623 TEPSINQ96N21 525 aa15.67■□□□□ 0.1
TIMP1-204ENST00000445623 ZNF287Q9HBT7 754 aa15.67■□□□□ 0.1
TIMP1-204ENST00000445623 HERC5Q9UII4 1024 aaKnown RBP15.67■□□□□ 0.1
TIMP1-204ENST00000445623 SERPINB13Q9UIV8 391 aa15.67■□□□□ 0.1
TIMP1-204ENST00000445623 RBM8AQ9Y5S9 174 aaKnown RBP15.67■□□□□ 0.1
TIMP1-204ENST00000445623 FSTL1Q12841 308 aa15.66■□□□□ 0.1
TIMP1-204ENST00000445623 SLC4A8Q2Y0W8 1093 aa15.66■□□□□ 0.1
TIMP1-204ENST00000445623 NBPF12Q5TAG4 269 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 355.8 ms