RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 PICALMQ13492 652 aa11.3□□□□□ -0.6
NPHP1-207ENST00000445609 STOX1Q6ZVD7 989 aa11.3□□□□□ -0.6
NPHP1-207ENST00000445609 IDI2Q9BXS1 227 aa11.3□□□□□ -0.6
NPHP1-207ENST00000445609 UPF3BQ9BZI7 483 aaKnown RBP11.3□□□□□ -0.6
NPHP1-207ENST00000445609 NBPF3Q9H094 633 aa11.3□□□□□ -0.6
NPHP1-207ENST00000445609 CYP46A1Q9Y6A2 500 aa11.3□□□□□ -0.6
NPHP1-207ENST00000445609 SHTN1A0MZ66 631 aa11.3□□□□□ -0.6
NPHP1-207ENST00000445609 H7C1D1 291 aa11.3□□□□□ -0.6
NPHP1-207ENST00000445609 MYO1BO43795 1136 aa11.3□□□□□ -0.6
NPHP1-207ENST00000445609 HMGB1P09429 215 aaKnown RBP11.3□□□□□ -0.6
NPHP1-207ENST00000445609 CTDSPL2Q05D32 466 aa11.3□□□□□ -0.6
NPHP1-207ENST00000445609 C12orf60Q5U649 245 aa11.3□□□□□ -0.6
NPHP1-207ENST00000445609 DPY19L2Q6NUT2 758 aa11.3□□□□□ -0.6
NPHP1-207ENST00000445609 BLOC1S2Q6QNY1 142 aa11.3□□□□□ -0.6
NPHP1-207ENST00000445609 TBC1D10CQ8IV04 446 aa11.3□□□□□ -0.6
NPHP1-207ENST00000445609 ZBED3Q96IU2 234 aaPredicted RBP11.3□□□□□ -0.6
NPHP1-207ENST00000445609 TMOD2Q9NZR1 351 aa11.3□□□□□ -0.6
NPHP1-207ENST00000445609 CYP2D7A0A087X1C5 515 aa11.29□□□□□ -0.6
NPHP1-207ENST00000445609 ST18O60284 1047 aa11.29□□□□□ -0.6
NPHP1-207ENST00000445609 NPM3O75607 178 aaKnown RBP11.29□□□□□ -0.6
NPHP1-207ENST00000445609 DDNO94850 711 aaPredicted RBP11.29□□□□□ -0.6
NPHP1-207ENST00000445609 POLR3DP05423 398 aaPredicted RBP11.29□□□□□ -0.6
NPHP1-207ENST00000445609 TRDNQ13061 729 aa11.29□□□□□ -0.6
NPHP1-207ENST00000445609 AKNAD1Q5T1N1 836 aa11.29□□□□□ -0.6
NPHP1-207ENST00000445609 MFSD6Q6ZSS7 791 aa11.29□□□□□ -0.6
NPHP1-207ENST00000445609 RUFY3Q7L099 469 aa11.29□□□□□ -0.6
NPHP1-207ENST00000445609 RNF41Q9H4P4 317 aaPredicted RBP11.29□□□□□ -0.6
NPHP1-207ENST00000445609 DDX4Q9NQI0 724 aaKnown RBP11.29□□□□□ -0.6
NPHP1-207ENST00000445609 GPRC5DQ9NZD1 345 aa11.29□□□□□ -0.6
NPHP1-207ENST00000445609 SAP30BPQ9UHR5 308 aaKnown RBP11.29□□□□□ -0.6
NPHP1-207ENST00000445609 ZC3H4Q9UPT8 1303 aaKnown RBP11.29□□□□□ -0.6
NPHP1-207ENST00000445609 WNT10BO00744 389 aa11.29□□□□□ -0.6
NPHP1-207ENST00000445609 SLC3A2P08195 630 aaKnown RBP11.29□□□□□ -0.6
NPHP1-207ENST00000445609 CYP2D6P10635 497 aa11.29□□□□□ -0.6
NPHP1-207ENST00000445609 CACNB3P54284 484 aa11.29□□□□□ -0.6
NPHP1-207ENST00000445609 NFIAQ12857 509 aa11.29□□□□□ -0.6
NPHP1-207ENST00000445609 RBM26Q5T8P6 1007 aaKnown RBP11.29□□□□□ -0.6
NPHP1-207ENST00000445609 NCOA7Q8NI08 942 aa11.29□□□□□ -0.6
NPHP1-207ENST00000445609 STAG1Q8WVM7 1258 aa11.29□□□□□ -0.6
NPHP1-207ENST00000445609 OSBPL5Q9H0X9 879 aaPredicted RBP11.29□□□□□ -0.6
NPHP1-207ENST00000445609 ZNF70Q9UC06 446 aaPredicted RBP11.29□□□□□ -0.6
NPHP1-207ENST00000445609 CPA1P15085 419 aa11.28□□□□□ -0.6
NPHP1-207ENST00000445609 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
NPHP1-207ENST00000445609 SAMD7Q7Z3H4 446 aa11.28□□□□□ -0.6
NPHP1-207ENST00000445609 RALYLQ86SE5 291 aaKnown RBP11.28□□□□□ -0.6
NPHP1-207ENST00000445609 CNNM2Q9H8M5 875 aa11.28□□□□□ -0.6
NPHP1-207ENST00000445609 SBF1O95248 1867 aa11.28□□□□□ -0.6
NPHP1-207ENST00000445609 CLRN2A0PK11 232 aa11.28□□□□□ -0.6
NPHP1-207ENST00000445609 SMIM22K7EJ46 135 aa11.28□□□□□ -0.6
NPHP1-207ENST00000445609 PCP11498 1178 aaKnown RBP11.28□□□□□ -0.6
NPHP1-207ENST00000445609 RPS6KB1P23443 525 aa11.28□□□□□ -0.6
NPHP1-207ENST00000445609 NBPF9Q3BBW0 867 aa11.28□□□□□ -0.6
NPHP1-207ENST00000445609 DHX32Q7L7V1 743 aaKnown RBP11.28□□□□□ -0.6
NPHP1-207ENST00000445609 TTC6Q86TZ1 520 aa11.28□□□□□ -0.6
NPHP1-207ENST00000445609 STK11IPQ8N1F8 1099 aa11.28□□□□□ -0.6
NPHP1-207ENST00000445609 SNX21Q969T3 373 aa11.28□□□□□ -0.6
NPHP1-207ENST00000445609 PDRG1Q9NUG6 133 aa11.28□□□□□ -0.6
NPHP1-207ENST00000445609 FAM198AQ9UFP1 575 aa11.28□□□□□ -0.6
NPHP1-207ENST00000445609 DICER1Q9UPY3 1922 aaKnown RBP11.27□□□□□ -0.61
NPHP1-207ENST00000445609 DCAF8L1A6NGE4 600 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 ENTPD3O75355 529 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 EGFRP00533 1210 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 PLCD1P51178 756 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 TCP10Q12799 353 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 SLC4A8Q2Y0W8 1093 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 TBC1D10BQ4KMP7 808 aaPredicted RBP11.27□□□□□ -0.61
NPHP1-207ENST00000445609 FKBP1CQ5VVH2 108 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 KRT23Q9C075 422 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 INCENPQ9NQS7 918 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 ADAMTSL1Q8N6G6 1762 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 FGRP09769 529 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 LMOD1P29536 600 aaPredicted RBP11.27□□□□□ -0.61
NPHP1-207ENST00000445609 EPS15P42566 896 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 EVX2Q03828 476 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 PDE4BQ07343 736 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 COL9A3Q14050 684 aaPredicted RBP11.27□□□□□ -0.61
NPHP1-207ENST00000445609 BECN1Q14457 450 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 KIF4BQ2VIQ3 1234 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 ZFPM1Q8IX07 1006 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 TTC14Q96N46 770 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 DHX36Q9H2U1 1008 aaKnown RBP11.27□□□□□ -0.61
NPHP1-207ENST00000445609 TOMM22Q9NS69 142 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 TACC3Q9Y6A5 838 aa11.27□□□□□ -0.61
NPHP1-207ENST00000445609 TCP10L2B9ZVM9 353 aa11.26□□□□□ -0.61
NPHP1-207ENST00000445609 MCM5P33992 734 aa11.26□□□□□ -0.61
NPHP1-207ENST00000445609 EXOSC10Q01780 885 aaKnown RBP11.26□□□□□ -0.61
NPHP1-207ENST00000445609 MB21D2Q8IYB1 491 aaPredicted RBP11.26□□□□□ -0.61
NPHP1-207ENST00000445609 VEZTQ9HBM0 779 aa11.26□□□□□ -0.61
NPHP1-207ENST00000445609 NEDD4P46934 1319 aa11.26□□□□□ -0.61
NPHP1-207ENST00000445609 UTRNP46939 3433 aa11.26□□□□□ -0.61
NPHP1-207ENST00000445609 GLTPD2A6NH11 291 aa11.26□□□□□ -0.61
NPHP1-207ENST00000445609 B4E1Z4 1266 aa11.26□□□□□ -0.61
NPHP1-207ENST00000445609 CD2BP2O95400 341 aaKnown RBP11.26□□□□□ -0.61
NPHP1-207ENST00000445609 HLA-DOAP06340 250 aa11.26□□□□□ -0.61
NPHP1-207ENST00000445609 MCM2P49736 904 aa11.26□□□□□ -0.61
NPHP1-207ENST00000445609 RRP12Q5JTH9 1297 aaKnown RBP11.26□□□□□ -0.61
NPHP1-207ENST00000445609 HSCBQ8IWL3 235 aa11.26□□□□□ -0.61
NPHP1-207ENST00000445609 ZSCAN29Q8IWY8 852 aaPredicted RBP11.26□□□□□ -0.61
NPHP1-207ENST00000445609 IPO9Q96P70 1041 aaKnown RBP11.26□□□□□ -0.61
NPHP1-207ENST00000445609 TBC1D2Q9BYX2 928 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms