RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-208ENST00000441141 BCL11AQ9H165 835 aa5.69□□□□□ -1.5
VPS8-208ENST00000441141 EHD4Q9H223 541 aa5.69□□□□□ -1.5
VPS8-208ENST00000441141 MBNL3Q9NUK0 354 aaKnown RBP5.69□□□□□ -1.5
VPS8-208ENST00000441141 ITPKAP23677 461 aa5.68□□□□□ -1.5
VPS8-208ENST00000441141 FGD1P98174 961 aa5.68□□□□□ -1.5
VPS8-208ENST00000441141 ID3Q02535 119 aa5.68□□□□□ -1.5
VPS8-208ENST00000441141 ECM1Q16610 540 aa5.68□□□□□ -1.5
VPS8-208ENST00000441141 SPOCD1Q6ZMY3 1216 aa5.68□□□□□ -1.5
VPS8-208ENST00000441141 SMYD4Q8IYR2 804 aaPredicted RBP5.68□□□□□ -1.5
VPS8-208ENST00000441141 LRRN4CLQ8ND94 238 aa5.68□□□□□ -1.5
VPS8-208ENST00000441141 ASB16Q96NS5 453 aa5.68□□□□□ -1.5
VPS8-208ENST00000441141 MKNK2Q9HBH9 465 aa5.68□□□□□ -1.5
VPS8-208ENST00000441141 CRIM1Q9NZV1 1036 aa5.68□□□□□ -1.5
VPS8-208ENST00000441141 ADAMTS6Q9UKP5 1117 aa5.68□□□□□ -1.5
VPS8-208ENST00000441141 TMPRSS2O15393 492 aa5.67□□□□□ -1.5
VPS8-208ENST00000441141 PTPN12Q05209 780 aaKnown RBP5.67□□□□□ -1.5
VPS8-208ENST00000441141 AOC3Q16853 763 aa5.67□□□□□ -1.5
VPS8-208ENST00000441141 ANGEL2Q5VTE6 544 aaKnown RBP5.67□□□□□ -1.5
VPS8-208ENST00000441141 TMEM265A0A087WTH1 108 aa5.66□□□□□ -1.5
VPS8-208ENST00000441141 RNGTTO60942 597 aaKnown RBP5.66□□□□□ -1.5
VPS8-208ENST00000441141 LIG1P18858 919 aa5.66□□□□□ -1.5
VPS8-208ENST00000441141 CD96P40200 585 aa5.66□□□□□ -1.5
VPS8-208ENST00000441141 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
VPS8-208ENST00000441141 RPS26P11Q5JNZ5 115 aaPredicted RBP5.66□□□□□ -1.5
VPS8-208ENST00000441141 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
VPS8-208ENST00000441141 BHLHE22Q8NFJ8 381 aaPredicted RBP5.66□□□□□ -1.5
VPS8-208ENST00000441141 FAM84AQ96KN4 292 aa5.66□□□□□ -1.5
VPS8-208ENST00000441141 FANCD2OSQ96PS1 177 aa5.66□□□□□ -1.5
VPS8-208ENST00000441141 CCDC86Q9H6F5 360 aaKnown RBP5.66□□□□□ -1.5
VPS8-208ENST00000441141 LRRC10BA6NIK2 292 aa5.65□□□□□ -1.5
VPS8-208ENST00000441141 CEACAM5P06731 702 aa5.65□□□□□ -1.5
VPS8-208ENST00000441141 ITGAEP38570 1179 aa5.65□□□□□ -1.5
VPS8-208ENST00000441141 PLCB3Q01970 1234 aa5.65□□□□□ -1.5
VPS8-208ENST00000441141 SLC23A3Q6PIS1 610 aa5.65□□□□□ -1.5
VPS8-208ENST00000441141 ALKBH8Q96BT7 664 aaKnown RBP5.65□□□□□ -1.5
VPS8-208ENST00000441141 WDR89Q96FK6 387 aaPredicted RBP5.65□□□□□ -1.5
VPS8-208ENST00000441141 FAM129BQ96TA1 746 aa5.65□□□□□ -1.5
VPS8-208ENST00000441141 ZC3H12CQ9C0D7 883 aaKnown RBP5.65□□□□□ -1.5
VPS8-208ENST00000441141 NPHS2Q9NP85 383 aa5.65□□□□□ -1.5
VPS8-208ENST00000441141 FAM53CQ9NYF3 392 aa5.65□□□□□ -1.5
VPS8-208ENST00000441141 PCOLCE2Q9UKZ9 415 aa5.65□□□□□ -1.5
VPS8-208ENST00000441141 ANKRD33BA6NCL7 494 aa5.64□□□□□ -1.51
VPS8-208ENST00000441141 CPNE3O75131 537 aaKnown RBP5.64□□□□□ -1.51
VPS8-208ENST00000441141 ATP2B2Q01814 1243 aa5.64□□□□□ -1.51
VPS8-208ENST00000441141 TTLL4Q14679 1199 aa5.64□□□□□ -1.51
VPS8-208ENST00000441141 USPL1Q5W0Q7 1092 aa5.64□□□□□ -1.51
VPS8-208ENST00000441141 TMC7Q7Z402 723 aa5.64□□□□□ -1.51
VPS8-208ENST00000441141 ZSWIM9Q86XI8 627 aa5.64□□□□□ -1.51
VPS8-208ENST00000441141 FLAD1Q8NFF5 587 aa5.64□□□□□ -1.51
VPS8-208ENST00000441141 DUSP23Q9BVJ7 150 aa5.64□□□□□ -1.51
VPS8-208ENST00000441141 KRTAP9-8Q9BYQ0 159 aa5.64□□□□□ -1.51
VPS8-208ENST00000441141 SSU72Q9NP77 194 aaKnown RBP5.64□□□□□ -1.51
VPS8-208ENST00000441141 DISC1Q9NRI5 854 aa5.64□□□□□ -1.51
VPS8-208ENST00000441141 TREHO43280 583 aa5.63□□□□□ -1.51
VPS8-208ENST00000441141 LEFTY1O75610 366 aa5.63□□□□□ -1.51
VPS8-208ENST00000441141 GSTP1P09211 210 aaKnown RBP5.63□□□□□ -1.51
VPS8-208ENST00000441141 HCLS1P14317 486 aaPredicted RBP5.63□□□□□ -1.51
VPS8-208ENST00000441141 ITIH2P19823 946 aa5.63□□□□□ -1.51
VPS8-208ENST00000441141 OXCT1P55809 520 aa5.63□□□□□ -1.51
VPS8-208ENST00000441141 KCNMB1Q16558 191 aa5.63□□□□□ -1.51
VPS8-208ENST00000441141 KIF4BQ2VIQ3 1234 aa5.63□□□□□ -1.51
VPS8-208ENST00000441141 TOX2Q96NM4 488 aa5.63□□□□□ -1.51
VPS8-208ENST00000441141 DNAJC25Q9H1X3 360 aa5.63□□□□□ -1.51
VPS8-208ENST00000441141 ABCB6Q9NP58 842 aa5.63□□□□□ -1.51
VPS8-208ENST00000441141 KRT82Q9NSB4 513 aa5.63□□□□□ -1.51
VPS8-208ENST00000441141 TRAK1Q9UPV9 953 aa5.63□□□□□ -1.51
VPS8-208ENST00000441141 ZNF862O60290 1169 aa5.62□□□□□ -1.51
VPS8-208ENST00000441141 GADD45BO75293 160 aaPredicted RBP5.62□□□□□ -1.51
VPS8-208ENST00000441141 RAP1GAPP47736 663 aa5.62□□□□□ -1.51
VPS8-208ENST00000441141 ZNF157P51786 506 aaPredicted RBP5.62□□□□□ -1.51
VPS8-208ENST00000441141 PPP2R3AQ06190 1150 aa5.62□□□□□ -1.51
VPS8-208ENST00000441141 MESP2Q0VG99 397 aa5.62□□□□□ -1.51
VPS8-208ENST00000441141 PRPF40BQ6NWY9 871 aaKnown RBP5.62□□□□□ -1.51
VPS8-208ENST00000441141 ASB11Q8WXH4 323 aa5.62□□□□□ -1.51
VPS8-208ENST00000441141 NIF3L1Q9GZT8 377 aa5.62□□□□□ -1.51
VPS8-208ENST00000441141 SNX11Q9Y5W9 270 aa5.62□□□□□ -1.51
VPS8-208ENST00000441141 U3KQE9 123 aa5.62□□□□□ -1.51
VPS8-208ENST00000441141 TMEM238LA0A1B0GVL6 79 aa5.61□□□□□ -1.51
VPS8-208ENST00000441141 IKZF1Q13422 519 aa5.61□□□□□ -1.51
VPS8-208ENST00000441141 MLANAQ16655 118 aa5.61□□□□□ -1.51
VPS8-208ENST00000441141 EAPPQ56P03 285 aaPredicted RBP5.61□□□□□ -1.51
VPS8-208ENST00000441141 ZNF326Q5BKZ1 582 aaKnown RBP5.61□□□□□ -1.51
VPS8-208ENST00000441141 DNAJC14Q6Y2X3 702 aaPredicted RBP5.61□□□□□ -1.51
VPS8-208ENST00000441141 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.61□□□□□ -1.51
VPS8-208ENST00000441141 TOP6BLQ8N6T0 577 aa5.61□□□□□ -1.51
VPS8-208ENST00000441141 PPP1R16BQ96T49 567 aa5.61□□□□□ -1.51
VPS8-208ENST00000441141 PLAGL2Q9UPG8 496 aa5.61□□□□□ -1.51
VPS8-208ENST00000441141 GPR182O15218 404 aa5.6□□□□□ -1.51
VPS8-208ENST00000441141 MAPK8P45983 427 aa5.6□□□□□ -1.51
VPS8-208ENST00000441141 ORC1Q13415 861 aa5.6□□□□□ -1.51
VPS8-208ENST00000441141 ALG1LQ6GMV1 187 aa5.6□□□□□ -1.51
VPS8-208ENST00000441141 ZSCAN18Q8TBC5 510 aaPredicted RBP5.6□□□□□ -1.51
VPS8-208ENST00000441141 KCNB2Q92953 911 aa5.6□□□□□ -1.51
VPS8-208ENST00000441141 CCDC74AQ96AQ1 378 aa5.6□□□□□ -1.51
VPS8-208ENST00000441141 CSRNP1Q96S65 589 aa5.6□□□□□ -1.51
VPS8-208ENST00000441141 TNKS2Q9H2K2 1166 aa5.6□□□□□ -1.51
VPS8-208ENST00000441141 GTF2IRD1Q9UHL9 959 aa5.6□□□□□ -1.51
VPS8-208ENST00000441141 PCDHGC5Q9Y5F6 944 aa5.6□□□□□ -1.51
VPS8-208ENST00000441141 ZP2Q05996 745 aa5.59□□□□□ -1.51
VPS8-208ENST00000441141 FMR1Q06787 632 aaKnown RBP eCLIP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms