RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 LY9Q9HBG7 655 aa17.5■□□□□ 0.39
IFT140-204ENST00000439987 H0YIN7 160 aa17.5■□□□□ 0.39
IFT140-204ENST00000439987 LIFRP42702 1097 aa17.5■□□□□ 0.39
IFT140-204ENST00000439987 DPP8Q6V1X1 898 aaPredicted RBP17.5■□□□□ 0.39
IFT140-204ENST00000439987 STK11IPQ8N1F8 1099 aa17.5■□□□□ 0.39
IFT140-204ENST00000439987 IFIT3O14879 490 aaKnown RBP17.49■□□□□ 0.39
IFT140-204ENST00000439987 DIXDC1Q155Q3 683 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 APOA5Q6Q788 366 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 TMEM87AQ8NBN3 555 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 TBC1D22AQ8WUA7 517 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 MTA3Q9BTC8 594 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 COA1Q9GZY4 146 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 SENP2Q9HC62 589 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 GDPD2Q9HCC8 539 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 CNPY2Q9Y2B0 182 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 CYP2D7A0A087X1C5 515 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 USP17L12C9JPN9 530 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 USP17L21D6R901 530 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 RIMBP2O15034 1052 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 LDHCP07864 332 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 MFSD14BQ5SR56 506 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 STYK1Q6J9G0 422 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 FERMT3Q86UX7 667 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 GPT2Q8TD30 523 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 FAM205AQ6ZU69 1335 aa17.49■□□□□ 0.39
IFT140-204ENST00000439987 SMIM22K7EJ46 135 aa17.48■□□□□ 0.39
IFT140-204ENST00000439987 SART3Q15020 963 aaKnown RBP17.48■□□□□ 0.39
IFT140-204ENST00000439987 DEFB132Q7Z7B7 95 aa17.48■□□□□ 0.39
IFT140-204ENST00000439987 USP48Q86UV5 1035 aa17.48■□□□□ 0.39
IFT140-204ENST00000439987 RAB11FIP4Q86YS3 637 aa17.48■□□□□ 0.39
IFT140-204ENST00000439987 ZC3H12CQ9C0D7 883 aaKnown RBP17.48■□□□□ 0.39
IFT140-204ENST00000439987 H3BQV1 296 aa17.48■□□□□ 0.39
IFT140-204ENST00000439987 BAG3O95817 575 aa17.48■□□□□ 0.39
IFT140-204ENST00000439987 PCP11498 1178 aaKnown RBP17.48■□□□□ 0.39
IFT140-204ENST00000439987 PPP4CP60510 307 aa17.48■□□□□ 0.39
IFT140-204ENST00000439987 DNM1Q05193 864 aaKnown RBP17.48■□□□□ 0.39
IFT140-204ENST00000439987 IFFO2Q5TF58 517 aa17.48■□□□□ 0.39
IFT140-204ENST00000439987 NFXL1Q6ZNB6 911 aa17.48■□□□□ 0.39
IFT140-204ENST00000439987 ESR2Q92731 530 aa17.48■□□□□ 0.39
IFT140-204ENST00000439987 MROH7-TTC4A0A0A0MT08 1334 aa17.48■□□□□ 0.39
IFT140-204ENST00000439987 CPLX1O14810 134 aa17.47■□□□□ 0.39
IFT140-204ENST00000439987 FGRP09769 529 aa17.47■□□□□ 0.39
IFT140-204ENST00000439987 NCLP19338 710 aaKnown RBP17.47■□□□□ 0.39
IFT140-204ENST00000439987 METAP2P50579 478 aaKnown RBP eCLIP17.47■□□□□ 0.39
IFT140-204ENST00000439987 ARPP21Q9UBL0 812 aaPredicted RBP17.47■□□□□ 0.39
IFT140-204ENST00000439987 MYH2Q9UKX2 1941 aa17.47■□□□□ 0.39
IFT140-204ENST00000439987 FDPSP14324 419 aaKnown RBP17.47■□□□□ 0.39
IFT140-204ENST00000439987 SBK1Q52WX2 424 aa17.47■□□□□ 0.39
IFT140-204ENST00000439987 NOL10Q9BSC4 688 aaKnown RBP17.47■□□□□ 0.39
IFT140-204ENST00000439987 ZBTB43O43298 467 aa17.46■□□□□ 0.39
IFT140-204ENST00000439987 PPFIA3O75145 1194 aa17.46■□□□□ 0.39
IFT140-204ENST00000439987 MBD3O95983 291 aa17.46■□□□□ 0.39
IFT140-204ENST00000439987 ZKSCAN3Q9BRR0 538 aa17.46■□□□□ 0.39
IFT140-204ENST00000439987 RTFDC1Q9BY42 306 aaPredicted RBP17.46■□□□□ 0.39
IFT140-204ENST00000439987 LAMB1P07942 1786 aa17.46■□□□□ 0.39
IFT140-204ENST00000439987 ERICH2A1L162 156 aa17.46■□□□□ 0.39
IFT140-204ENST00000439987 CCDC69A6NI79 296 aa17.46■□□□□ 0.39
IFT140-204ENST00000439987 GTF2IP78347 998 aa17.46■□□□□ 0.39
IFT140-204ENST00000439987 CERS3Q8IU89 383 aa17.46■□□□□ 0.39
IFT140-204ENST00000439987 SH3RF3Q8TEJ3 882 aaPredicted RBP17.46■□□□□ 0.39
IFT140-204ENST00000439987 MKRN1Q9UHC7 482 aaKnown RBP17.46■□□□□ 0.39
IFT140-204ENST00000439987 SLC12A7Q9Y666 1083 aa17.46■□□□□ 0.39
IFT140-204ENST00000439987 WTAPQ15007 396 aa17.45■□□□□ 0.38
IFT140-204ENST00000439987 MICU3Q86XE3 530 aa17.45■□□□□ 0.38
IFT140-204ENST00000439987 UBAC1Q9BSL1 405 aa17.45■□□□□ 0.38
IFT140-204ENST00000439987 PDGFDQ9GZP0 370 aaPredicted RBP17.45■□□□□ 0.38
IFT140-204ENST00000439987 FIBPO43427 364 aa17.45■□□□□ 0.38
IFT140-204ENST00000439987 CHRNA5P30532 468 aa17.45■□□□□ 0.38
IFT140-204ENST00000439987 USP5P45974 858 aa17.45■□□□□ 0.38
IFT140-204ENST00000439987 CAVIN1Q6NZI2 390 aaKnown RBP17.45■□□□□ 0.38
IFT140-204ENST00000439987 TMTC2Q8N394 836 aa17.45■□□□□ 0.38
IFT140-204ENST00000439987 EYA3Q99504 573 aa17.45■□□□□ 0.38
IFT140-204ENST00000439987 MCM9Q9NXL9 1143 aa17.45■□□□□ 0.38
IFT140-204ENST00000439987 RXRAP19793 462 aa17.44■□□□□ 0.38
IFT140-204ENST00000439987 CSPP1Q1MSJ5 1256 aa17.44■□□□□ 0.38
IFT140-204ENST00000439987 SLF2Q8IX21 1173 aa17.44■□□□□ 0.38
IFT140-204ENST00000439987 CNKSR1Q969H4 720 aa17.44■□□□□ 0.38
IFT140-204ENST00000439987 FAM163AQ96GL9 167 aaPredicted RBP17.44■□□□□ 0.38
IFT140-204ENST00000439987 ZSCAN16Q9H4T2 348 aaPredicted RBP17.44■□□□□ 0.38
IFT140-204ENST00000439987 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.44■□□□□ 0.38
IFT140-204ENST00000439987 GPR75-ASB3A0A0A6YYF3 556 aa17.44■□□□□ 0.38
IFT140-204ENST00000439987 SLC3A2P08195 630 aaKnown RBP17.44■□□□□ 0.38
IFT140-204ENST00000439987 ADD1P35611 737 aaKnown RBP17.44■□□□□ 0.38
IFT140-204ENST00000439987 KRT85P78386 507 aa17.44■□□□□ 0.38
IFT140-204ENST00000439987 RESTQ13127 1097 aa17.44■□□□□ 0.38
IFT140-204ENST00000439987 FAM173BQ6P4H8 233 aa17.44■□□□□ 0.38
IFT140-204ENST00000439987 ORC3Q9UBD5 711 aaPredicted RBP17.44■□□□□ 0.38
IFT140-204ENST00000439987 SLX4Q8IY92 1834 aa17.44■□□□□ 0.38
IFT140-204ENST00000439987 GOLGA8AA7E2F4 631 aa17.43■□□□□ 0.38
IFT140-204ENST00000439987 ORC4O43929 436 aa17.43■□□□□ 0.38
IFT140-204ENST00000439987 GADD45BO75293 160 aaPredicted RBP17.43■□□□□ 0.38
IFT140-204ENST00000439987 PRDM1O75626 825 aa17.43■□□□□ 0.38
IFT140-204ENST00000439987 CDKL5O76039 1030 aa17.43■□□□□ 0.38
IFT140-204ENST00000439987 CYP2D6P10635 497 aa17.43■□□□□ 0.38
IFT140-204ENST00000439987 CDC27P30260 824 aa17.43■□□□□ 0.38
IFT140-204ENST00000439987 BTDP43251 543 aa17.43■□□□□ 0.38
IFT140-204ENST00000439987 EVX2Q03828 476 aa17.43■□□□□ 0.38
IFT140-204ENST00000439987 SYNE3Q6ZMZ3 975 aa17.43■□□□□ 0.38
IFT140-204ENST00000439987 MYL10Q9BUA6 226 aa17.43■□□□□ 0.38
IFT140-204ENST00000439987 RANBP6O60518 1105 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms