RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 IL17RAQ96F46 866 aa11.88□□□□□ -0.51
CBX5-202ENST00000439541 DDX4Q9NQI0 724 aaKnown RBP11.88□□□□□ -0.51
CBX5-202ENST00000439541 USP40Q9NVE5 1235 aa11.88□□□□□ -0.51
CBX5-202ENST00000439541 CTNNA3Q9UI47 895 aa11.88□□□□□ -0.51
CBX5-202ENST00000439541 SERPINA10Q9UK55 444 aa11.88□□□□□ -0.51
CBX5-202ENST00000439541 ECM29Q5VYK3 1845 aa11.88□□□□□ -0.51
CBX5-202ENST00000439541 NEDD4P46934 1319 aa11.88□□□□□ -0.51
CBX5-202ENST00000439541 MINDY4BA8MYZ0 360 aa11.88□□□□□ -0.51
CBX5-202ENST00000439541 E7EWF7 191 aa11.88□□□□□ -0.51
CBX5-202ENST00000439541 ZNF213O14771 459 aa11.88□□□□□ -0.51
CBX5-202ENST00000439541 WDHD1O75717 1129 aaPredicted RBP11.88□□□□□ -0.51
CBX5-202ENST00000439541 TNIP1Q15025 636 aa11.88□□□□□ -0.51
CBX5-202ENST00000439541 CTR9Q6PD62 1173 aa11.88□□□□□ -0.51
CBX5-202ENST00000439541 NOL8Q76FK4 1167 aaKnown RBP11.88□□□□□ -0.51
CBX5-202ENST00000439541 AGBL3Q8NEM8 1001 aa11.88□□□□□ -0.51
CBX5-202ENST00000439541 TBC1D2Q9BYX2 928 aa11.88□□□□□ -0.51
CBX5-202ENST00000439541 MCM9Q9NXL9 1143 aa11.88□□□□□ -0.51
CBX5-202ENST00000439541 MKRN1Q9UHC7 482 aaKnown RBP11.88□□□□□ -0.51
CBX5-202ENST00000439541 CLRN2A0PK11 232 aa11.87□□□□□ -0.51
CBX5-202ENST00000439541 USP17L12C9JPN9 530 aa11.87□□□□□ -0.51
CBX5-202ENST00000439541 USP17L21D6R901 530 aa11.87□□□□□ -0.51
CBX5-202ENST00000439541 NEK4P51957 841 aa11.87□□□□□ -0.51
CBX5-202ENST00000439541 PPARAQ07869 468 aa11.87□□□□□ -0.51
CBX5-202ENST00000439541 PRMT6Q96LA8 375 aaPredicted RBP11.87□□□□□ -0.51
CBX5-202ENST00000439541 TDRD3Q9H7E2 651 aaKnown RBP11.87□□□□□ -0.51
CBX5-202ENST00000439541 ATP8A2Q9NTI2 1148 aa11.87□□□□□ -0.51
CBX5-202ENST00000439541 SPDYE2BA6NHP3 402 aa11.86□□□□□ -0.51
CBX5-202ENST00000439541 SPDYE6P0CI01 402 aa11.86□□□□□ -0.51
CBX5-202ENST00000439541 PLCG2P16885 1265 aa11.86□□□□□ -0.51
CBX5-202ENST00000439541 HDLBPQ00341 1268 aaKnown RBP11.86□□□□□ -0.51
CBX5-202ENST00000439541 TSGA10IPQ3SY00 556 aa11.86□□□□□ -0.51
CBX5-202ENST00000439541 L1TD1Q5T7N2 865 aaKnown RBP11.86□□□□□ -0.51
CBX5-202ENST00000439541 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
CBX5-202ENST00000439541 CHST3Q7LGC8 479 aa11.86□□□□□ -0.51
CBX5-202ENST00000439541 OGFOD1Q8N543 542 aa11.86□□□□□ -0.51
CBX5-202ENST00000439541 LARP6Q9BRS8 491 aaKnown RBP11.86□□□□□ -0.51
CBX5-202ENST00000439541 LRRC2Q9BYS8 371 aa11.86□□□□□ -0.51
CBX5-202ENST00000439541 SLKQ9H2G2 1235 aaPredicted RBP11.86□□□□□ -0.51
CBX5-202ENST00000439541 ZSWIM6Q9HCJ5 1215 aa11.86□□□□□ -0.51
CBX5-202ENST00000439541 ARPP21Q9UBL0 812 aaPredicted RBP11.86□□□□□ -0.51
CBX5-202ENST00000439541 HDAC9Q9UKV0 1011 aa11.86□□□□□ -0.51
CBX5-202ENST00000439541 PRDM1O75626 825 aa11.85□□□□□ -0.51
CBX5-202ENST00000439541 DDNO94850 711 aaPredicted RBP11.85□□□□□ -0.51
CBX5-202ENST00000439541 TCP10Q12799 353 aa11.85□□□□□ -0.51
CBX5-202ENST00000439541 KRT32Q14532 448 aa11.85□□□□□ -0.51
CBX5-202ENST00000439541 DLGAP5Q15398 846 aa11.85□□□□□ -0.51
CBX5-202ENST00000439541 RBM26Q5T8P6 1007 aaKnown RBP11.85□□□□□ -0.51
CBX5-202ENST00000439541 GIMAP6Q6P9H5 292 aa11.85□□□□□ -0.51
CBX5-202ENST00000439541 BLOC1S2Q6QNY1 142 aa11.85□□□□□ -0.51
CBX5-202ENST00000439541 SAMD7Q7Z3H4 446 aa11.85□□□□□ -0.51
CBX5-202ENST00000439541 ZFPM1Q8IX07 1006 aa11.85□□□□□ -0.51
CBX5-202ENST00000439541 NEK1Q96PY6 1258 aa11.85□□□□□ -0.51
CBX5-202ENST00000439541 MYOZ2Q9NPC6 264 aa11.85□□□□□ -0.51
CBX5-202ENST00000439541 SCAF8Q9UPN6 1271 aaKnown RBP11.85□□□□□ -0.51
CBX5-202ENST00000439541 ASTN2O75129 1339 aaPredicted RBP11.85□□□□□ -0.51
CBX5-202ENST00000439541 B4E1Z4 1266 aa11.84□□□□□ -0.51
CBX5-202ENST00000439541 SLURP2P0DP57 97 aa11.84□□□□□ -0.51
CBX5-202ENST00000439541 RPS6KB1P23443 525 aa11.84□□□□□ -0.51
CBX5-202ENST00000439541 RPS12P25398 132 aaKnown RBP11.84□□□□□ -0.51
CBX5-202ENST00000439541 PLCD1P51178 756 aa11.84□□□□□ -0.51
CBX5-202ENST00000439541 NBPF9Q3BBW0 867 aa11.84□□□□□ -0.51
CBX5-202ENST00000439541 TBC1D10BQ4KMP7 808 aaPredicted RBP11.84□□□□□ -0.51
CBX5-202ENST00000439541 RRP12Q5JTH9 1297 aaKnown RBP11.84□□□□□ -0.51
CBX5-202ENST00000439541 RUFY3Q7L099 469 aa11.84□□□□□ -0.51
CBX5-202ENST00000439541 CERS3Q8IU89 383 aa11.84□□□□□ -0.51
CBX5-202ENST00000439541 SLC44A5Q8NCS7 719 aa11.84□□□□□ -0.51
CBX5-202ENST00000439541 DYNLL2Q96FJ2 89 aa11.84□□□□□ -0.51
CBX5-202ENST00000439541 TTC14Q96N46 770 aa11.84□□□□□ -0.51
CBX5-202ENST00000439541 MRIQ9BWK5 157 aa11.84□□□□□ -0.51
CBX5-202ENST00000439541 TM6SF1Q9BZW5 370 aa11.84□□□□□ -0.51
CBX5-202ENST00000439541 FAM198AQ9UFP1 575 aa11.84□□□□□ -0.51
CBX5-202ENST00000439541 CYP46A1Q9Y6A2 500 aa11.84□□□□□ -0.51
CBX5-202ENST00000439541 AK2P54819 239 aa11.83□□□□□ -0.51
CBX5-202ENST00000439541 ANTXR2P58335 489 aa11.83□□□□□ -0.51
CBX5-202ENST00000439541 ZNF280AP59817 542 aaPredicted RBP11.83□□□□□ -0.51
CBX5-202ENST00000439541 AKNAD1Q5T1N1 836 aa11.83□□□□□ -0.51
CBX5-202ENST00000439541 C12orf60Q5U649 245 aa11.83□□□□□ -0.51
CBX5-202ENST00000439541 MB21D2Q8IYB1 491 aaPredicted RBP11.83□□□□□ -0.51
CBX5-202ENST00000439541 GPC2Q8N158 579 aa11.83□□□□□ -0.51
CBX5-202ENST00000439541 STAG1Q8WVM7 1258 aa11.83□□□□□ -0.51
CBX5-202ENST00000439541 OSBPL5Q9H0X9 879 aaPredicted RBP11.83□□□□□ -0.51
CBX5-202ENST00000439541 GPHNQ9NQX3 736 aaPredicted RBP11.83□□□□□ -0.51
CBX5-202ENST00000439541 TOMM22Q9NS69 142 aa11.83□□□□□ -0.51
CBX5-202ENST00000439541 PDRG1Q9NUG6 133 aa11.83□□□□□ -0.51
CBX5-202ENST00000439541 CHMP5Q9NZZ3 219 aa11.83□□□□□ -0.51
CBX5-202ENST00000439541 CNOT7Q9UIV1 285 aaKnown RBP11.83□□□□□ -0.51
CBX5-202ENST00000439541 MYH1P12882 1939 aa11.83□□□□□ -0.52
CBX5-202ENST00000439541 SIPA1L1O43166 1804 aa11.83□□□□□ -0.52
CBX5-202ENST00000439541 ROBO3Q96MS0 1386 aa11.83□□□□□ -0.52
CBX5-202ENST00000439541 TCP10L2B9ZVM9 353 aa11.83□□□□□ -0.52
CBX5-202ENST00000439541 WNT10BO00744 389 aa11.83□□□□□ -0.52
CBX5-202ENST00000439541 ST18O60284 1047 aa11.83□□□□□ -0.52
CBX5-202ENST00000439541 POLR3DP05423 398 aaPredicted RBP11.83□□□□□ -0.52
CBX5-202ENST00000439541 PSMA5P28066 241 aa11.83□□□□□ -0.52
CBX5-202ENST00000439541 SBK1Q52WX2 424 aa11.83□□□□□ -0.52
CBX5-202ENST00000439541 CYB5R4Q7L1T6 521 aa11.83□□□□□ -0.52
CBX5-202ENST00000439541 RALYLQ86SE5 291 aaKnown RBP11.83□□□□□ -0.52
CBX5-202ENST00000439541 HSCBQ8IWL3 235 aa11.83□□□□□ -0.52
CBX5-202ENST00000439541 TRPM4Q8TD43 1214 aa11.83□□□□□ -0.52
CBX5-202ENST00000439541 ZBED3Q96IU2 234 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms