RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 KIF6Q6ZMV9 814 aa17.97■□□□□ 0.47
DHFR-201ENST00000439211 OTUD6BQ8N6M0 293 aa17.97■□□□□ 0.47
DHFR-201ENST00000439211 KCNB2Q92953 911 aa17.97■□□□□ 0.47
DHFR-201ENST00000439211 CRACR2AQ9BSW2 395 aa17.97■□□□□ 0.47
DHFR-201ENST00000439211 AKAP12Q02952 1782 aa17.96■□□□□ 0.47
DHFR-201ENST00000439211 PLCD4Q9BRC7 762 aa17.96■□□□□ 0.47
DHFR-201ENST00000439211 CPSF2Q9P2I0 782 aaKnown RBP17.96■□□□□ 0.47
DHFR-201ENST00000439211 PCDHA7Q9UN72 937 aa17.96■□□□□ 0.47
DHFR-201ENST00000439211 AKAP2Q9Y2D5 859 aa17.96■□□□□ 0.47
DHFR-201ENST00000439211 TOP1P11387 765 aaKnown RBP17.96■□□□□ 0.47
DHFR-201ENST00000439211 TBC1D2BQ9UPU7 963 aa17.96■□□□□ 0.47
DHFR-201ENST00000439211 CHMP4BP1P59074 171 aa17.96■□□□□ 0.47
DHFR-201ENST00000439211 BRD3Q15059 726 aa17.96■□□□□ 0.47
DHFR-201ENST00000439211 MED23Q9ULK4 1368 aa17.96■□□□□ 0.46
DHFR-201ENST00000439211 CCDC151A5D8V7 595 aa17.95■□□□□ 0.46
DHFR-201ENST00000439211 HNRNPH1P31943 449 aaKnown RBP17.95■□□□□ 0.46
DHFR-201ENST00000439211 SAFBQ15424 915 aaKnown RBP eCLIP17.95■□□□□ 0.461e-6■■■■□ 20.9
DHFR-201ENST00000439211 SWT1Q5T5J6 900 aaKnown RBP17.95■□□□□ 0.46
DHFR-201ENST00000439211 JMYQ8N9B5 988 aa17.95■□□□□ 0.46
DHFR-201ENST00000439211 KCNG4Q8TDN1 519 aa17.95■□□□□ 0.46
DHFR-201ENST00000439211 RABGGTAQ92696 567 aa17.95■□□□□ 0.46
DHFR-201ENST00000439211 GOLPH3LQ9H4A5 285 aa17.95■□□□□ 0.46
DHFR-201ENST00000439211 CTCFLQ8NI51 663 aaPredicted RBP17.95■□□□□ 0.46
DHFR-201ENST00000439211 GBP2P32456 591 aaPredicted RBP17.95■□□□□ 0.46
DHFR-201ENST00000439211 NDUFA8P51970 172 aa17.95■□□□□ 0.46
DHFR-201ENST00000439211 RCOR1Q9UKL0 485 aa17.95■□□□□ 0.46
DHFR-201ENST00000439211 ODF2LQ9ULJ1 636 aa17.95■□□□□ 0.46
DHFR-201ENST00000439211 PEX19P40855 299 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 AP1ARQ63HQ0 302 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 POTEDQ86YR6 584 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 ALG1Q9BT22 464 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 DSCC1Q9BVC3 393 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 FUT8Q9BYC5 575 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 CLIC4Q9Y696 253 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 A0A1B0GUA9 196 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 POTEB2H3BUK9 544 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 N4BP1O75113 896 aaKnown RBP17.94■□□□□ 0.46
DHFR-201ENST00000439211 SYKP43405 635 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 SLC9C2Q5TAH2 1124 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 NAIF1Q69YI7 327 aaPredicted RBP17.94■□□□□ 0.46
DHFR-201ENST00000439211 PI16Q6UXB8 463 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 NOC3LQ8WTT2 800 aaKnown RBP17.94■□□□□ 0.46
DHFR-201ENST00000439211 MPHOSPH8Q99549 860 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 GNL3LQ9NVN8 582 aaKnown RBP17.94■□□□□ 0.46
DHFR-201ENST00000439211 IMPACTQ9P2X3 320 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 MAST3O60307 1309 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 TXLNAP40222 546 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 METAP2P50579 478 aaKnown RBP eCLIP17.94■□□□□ 0.46
DHFR-201ENST00000439211 NUP133Q8WUM0 1156 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 PHLPP2Q6ZVD8 1323 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 ZNF609O15014 1411 aa17.94■□□□□ 0.46
DHFR-201ENST00000439211 XAGE2Q96GT9 111 aa17.93■□□□□ 0.46
DHFR-201ENST00000439211 CYP27B1O15528 508 aa17.93■□□□□ 0.46
DHFR-201ENST00000439211 ADORA1P30542 326 aa17.93■□□□□ 0.46
DHFR-201ENST00000439211 GCKP35557 465 aa17.93■□□□□ 0.46
DHFR-201ENST00000439211 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.93■□□□□ 0.467e-18■■■■□ 26.7
DHFR-201ENST00000439211 AIDAQ96BJ3 306 aa17.93■□□□□ 0.46
DHFR-201ENST00000439211 PXDNQ92626 1479 aa17.93■□□□□ 0.46
DHFR-201ENST00000439211 SSBP05455 408 aaKnown RBP eCLIP17.93■□□□□ 0.46
DHFR-201ENST00000439211 ZAP70P43403 619 aa17.93■□□□□ 0.46
DHFR-201ENST00000439211 OSBP2Q969R2 916 aa17.93■□□□□ 0.46
DHFR-201ENST00000439211 FGAP02671 866 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 HSPA2P54652 639 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 DPCR1Q3MIW9 517 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 ZMYM1Q5SVZ6 1142 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 ZCRB1Q8TBF4 217 aaKnown RBP17.92■□□□□ 0.46
DHFR-201ENST00000439211 CABS1Q96KC9 395 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 RUFY1Q96T51 708 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 M0R2C6 588 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 ZNF202O95125 648 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 TSGA10IPQ3SY00 556 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 IQUBQ8NA54 791 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 PRPF38AQ8NAV1 312 aaKnown RBP17.92■□□□□ 0.46
DHFR-201ENST00000439211 HELBQ8NG08 1087 aaPredicted RBP17.92■□□□□ 0.46
DHFR-201ENST00000439211 PHKBQ93100 1093 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 PTPN21Q16825 1174 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 USPL1Q5W0Q7 1092 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 HOMEZQ8IX15 550 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 FAM71BQ8TC56 605 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 SGSM3Q96HU1 749 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 MYL10Q9BUA6 226 aa17.92■□□□□ 0.46
DHFR-201ENST00000439211 UBR1Q8IWV7 1749 aa17.91■□□□□ 0.46
DHFR-201ENST00000439211 SARM1Q6SZW1 724 aa17.91■□□□□ 0.46
DHFR-201ENST00000439211 LRRC31Q6UY01 552 aa17.91■□□□□ 0.46
DHFR-201ENST00000439211 TRIM6Q9C030 488 aaPredicted RBP17.91■□□□□ 0.46
DHFR-201ENST00000439211 FAM169AQ9Y6X4 670 aa17.91■□□□□ 0.46
DHFR-201ENST00000439211 GPAA1O43292 621 aa17.91■□□□□ 0.46
DHFR-201ENST00000439211 PDE6BP35913 854 aa17.91■□□□□ 0.46
DHFR-201ENST00000439211 UBASH3AP57075 661 aa17.91■□□□□ 0.46
DHFR-201ENST00000439211 BCAS4Q8TDM0 211 aa17.91■□□□□ 0.46
DHFR-201ENST00000439211 ERICH2A1L162 156 aa17.91■□□□□ 0.46
DHFR-201ENST00000439211 CDKL5O76039 1030 aa17.91■□□□□ 0.46
DHFR-201ENST00000439211 ELF1P32519 619 aa17.91■□□□□ 0.46
DHFR-201ENST00000439211 ADD1P35611 737 aaKnown RBP17.91■□□□□ 0.46
DHFR-201ENST00000439211 IARSP41252 1262 aaKnown RBP17.91■□□□□ 0.46
DHFR-201ENST00000439211 KIAA1468Q9P260 1216 aa17.91■□□□□ 0.46
DHFR-201ENST00000439211 SPECC1Q5M775 1068 aa17.9■□□□□ 0.46
DHFR-201ENST00000439211 ADALQ6DHV7 355 aa17.9■□□□□ 0.46
DHFR-201ENST00000439211 ZNF274Q96GC6 653 aaPredicted RBP17.9■□□□□ 0.46
DHFR-201ENST00000439211 SCLT1Q96NL6 688 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms