RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 KAZALD1Q96I82 304 aa13.27□□□□□ -0.29
TRAPPC9-202ENST00000438773 BMP2KQ9NSY1 1161 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC9-202ENST00000438773 UBA7P41226 1012 aa13.26□□□□□ -0.29
TRAPPC9-202ENST00000438773 GTF2IP78347 998 aa13.26□□□□□ -0.29
TRAPPC9-202ENST00000438773 TTC6Q86TZ1 520 aa13.26□□□□□ -0.29
TRAPPC9-202ENST00000438773 MAPKAPK5Q8IW41 473 aa13.26□□□□□ -0.29
TRAPPC9-202ENST00000438773 NOC3LQ8WTT2 800 aaKnown RBP13.26□□□□□ -0.29
TRAPPC9-202ENST00000438773 ZFP91Q96JP5 570 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-202ENST00000438773 NARFQ9UHQ1 456 aa13.26□□□□□ -0.29
TRAPPC9-202ENST00000438773 H0YIN7 160 aa13.26□□□□□ -0.29
TRAPPC9-202ENST00000438773 WDHD1O75717 1129 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-202ENST00000438773 PIH1D3Q9NQM4 214 aaKnown RBP13.26□□□□□ -0.29
TRAPPC9-202ENST00000438773 PFKFB2O60825 505 aa13.26□□□□□ -0.29
TRAPPC9-202ENST00000438773 ANO6Q4KMQ2 910 aa13.26□□□□□ -0.29
TRAPPC9-202ENST00000438773 NLGN1Q8N2Q7 840 aa13.26□□□□□ -0.29
TRAPPC9-202ENST00000438773 TGFBRAP1Q8WUH2 860 aa13.26□□□□□ -0.29
TRAPPC9-202ENST00000438773 V9GY48 417 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-202ENST00000438773 CBFA2T2O43439 604 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 LARGE1O95461 756 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 ZNF710Q8N1W2 664 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 JDP2Q8WYK2 163 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 EPS15P42566 896 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 FAM200AQ8TCP9 573 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 LEO1Q8WVC0 666 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 FEZ1Q99689 392 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 UTYO14607 1347 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 TYRO3Q06418 890 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 VPS72Q15906 364 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 UVSSAQ2YD98 709 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 ATL3Q6DD88 541 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 CCDC148Q8NFR7 591 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 DNAJC25Q9H1X3 360 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 CLEC11AQ9Y240 323 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 SALL3Q9BXA9 1300 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 A0A1B0GVL5 298 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 CAVIN2O95810 425 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 PDIA3P30101 505 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 TCP11L1Q9NUJ3 509 aa13.25□□□□□ -0.29
TRAPPC9-202ENST00000438773 DEXIO95424 95 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 ATP2B4P23634 1241 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 NAPAP54920 295 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 SCRN1Q12765 414 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 FAM47AQ5JRC9 791 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 TBC1D9BQ66K14 1250 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 PPFIBP1Q86W92 1011 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 MYRIPQ8NFW9 859 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 TBC1D22AQ8WUA7 517 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 RAB34Q9BZG1 259 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 HDAC9Q9UKV0 1011 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 BMP15O95972 392 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 CALML3P27482 149 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 ALDH1B1P30837 517 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 DIS3L2Q8IYB7 885 aaKnown RBP13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 SMARCE1Q969G3 411 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 BSDC1Q9NW68 430 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 TCHHQ07283 1943 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 PRKAB2O43741 272 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 MYO1BO43795 1136 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 SCARF1Q14162 830 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 TTLL12Q14166 644 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 KRT40Q6A162 431 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 ARHGEF1Q92888 912 aaKnown RBP13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 RBM28Q9NW13 759 aaKnown RBP13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 CLIP2Q9UDT6 1046 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 SPATA31A5Q5VU36 1347 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 SPATA31A7Q8IWB4 1347 aa13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 RPAP1Q9BWH6 1393 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC9-202ENST00000438773 hCG_1642624A0A1W2PR95 340 aa13.23□□□□□ -0.29
TRAPPC9-202ENST00000438773 AP5Z1O43299 807 aa13.23□□□□□ -0.29
TRAPPC9-202ENST00000438773 TFAP4Q01664 338 aa13.23□□□□□ -0.29
TRAPPC9-202ENST00000438773 NRXN3Q9Y4C0 1643 aa13.23□□□□□ -0.29
TRAPPC9-202ENST00000438773 RIPOR2Q9Y4F9 1068 aa13.23□□□□□ -0.29
TRAPPC9-202ENST00000438773 KRT2P35908 639 aa13.23□□□□□ -0.29
TRAPPC9-202ENST00000438773 RFX5P48382 616 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC9-202ENST00000438773 ITPK1Q13572 414 aa13.23□□□□□ -0.29
TRAPPC9-202ENST00000438773 TMEM266Q2M3C6 531 aa13.23□□□□□ -0.29
TRAPPC9-202ENST00000438773 ZNF654Q8IZM8 581 aa13.23□□□□□ -0.29
TRAPPC9-202ENST00000438773 VEZTQ9HBM0 779 aa13.23□□□□□ -0.29
TRAPPC9-202ENST00000438773 XDHP47989 1333 aa13.23□□□□□ -0.29
TRAPPC9-202ENST00000438773 CELF1Q92879 486 aaKnown RBP13.23□□□□□ -0.29
TRAPPC9-202ENST00000438773 LEMD3Q9Y2U8 911 aa13.23□□□□□ -0.29
TRAPPC9-202ENST00000438773 USP42Q9H9J4 1324 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-202ENST00000438773 ANO1Q5XXA6 986 aa13.22□□□□□ -0.29
TRAPPC9-202ENST00000438773 PDE6BP35913 854 aa13.22□□□□□ -0.29
TRAPPC9-202ENST00000438773 AFMP43652 599 aa13.22□□□□□ -0.29
TRAPPC9-202ENST00000438773 EIF6P56537 245 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-202ENST00000438773 DYNLL1P63167 89 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-202ENST00000438773 TEX35Q5T0J7 233 aa13.22□□□□□ -0.29
TRAPPC9-202ENST00000438773 KANK3Q6NY19 840 aa13.22□□□□□ -0.29
TRAPPC9-202ENST00000438773 ZNF34Q8IZ26 560 aa13.22□□□□□ -0.29
TRAPPC9-202ENST00000438773 CMTR1Q8N1G2 835 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-202ENST00000438773 LCORLQ8N3X6 602 aa13.22□□□□□ -0.29
TRAPPC9-202ENST00000438773 PLA2G12BQ9BX93 195 aa13.22□□□□□ -0.29
TRAPPC9-202ENST00000438773 TNKSO95271 1327 aa13.22□□□□□ -0.29
TRAPPC9-202ENST00000438773 POLR3GO15318 223 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-202ENST00000438773 CHGBP05060 677 aa13.22□□□□□ -0.29
TRAPPC9-202ENST00000438773 BARGINQ6ZT62 677 aa13.22□□□□□ -0.29
TRAPPC9-202ENST00000438773 SEMA3EO15041 775 aa13.21□□□□□ -0.29
TRAPPC9-202ENST00000438773 SFPQP23246 707 aaKnown RBP eCLIP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms