RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 NBPF3Q9H094 633 aa16.18■□□□□ 0.18
PTCHD3-201ENST00000438700 DDX19AQ9NUU7 478 aaKnown RBP16.18■□□□□ 0.18
PTCHD3-201ENST00000438700 LEMD3Q9Y2U8 911 aa16.18■□□□□ 0.18
PTCHD3-201ENST00000438700 NRXN2Q9P2S2 1712 aa16.18■□□□□ 0.18
PTCHD3-201ENST00000438700 GPSM2P81274 684 aa16.18■□□□□ 0.18
PTCHD3-201ENST00000438700 EPB41L4AQ9HCS5 686 aaPredicted RBP16.18■□□□□ 0.18
PTCHD3-201ENST00000438700 HOXA10P31260 410 aaPredicted RBP16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 CHAF1AQ13111 956 aaPredicted RBP16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 LUZP1Q86V48 1076 aa16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 TBC1D10CQ8IV04 446 aa16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 GPR101Q96P66 508 aaPredicted RBP16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 CLSTN2Q9H4D0 955 aa16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 TAOK2Q9UL54 1235 aa16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 PYCARDQ9ULZ3 195 aa16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 MYH15Q9Y2K3 1946 aa16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 KLRG2A4D1S0 409 aaPredicted RBP16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 PATL2C9JE40 543 aaKnown RBP16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 PRKAB2O43741 272 aa16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 ANO6Q4KMQ2 910 aa16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 MSL1Q68DK7 614 aa16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 SPC24Q8NBT2 197 aa16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 FAM200AQ8TCP9 573 aa16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 HPS5Q9UPZ3 1129 aa16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 PDS5AQ29RF7 1337 aaKnown RBP16.17■□□□□ 0.18
PTCHD3-201ENST00000438700 SPDYE4A6NLX3 237 aa16.16■□□□□ 0.18
PTCHD3-201ENST00000438700 MMP10P09238 476 aa16.16■□□□□ 0.18
PTCHD3-201ENST00000438700 EVCP57679 992 aa16.16■□□□□ 0.18
PTCHD3-201ENST00000438700 PPP4R3BQ5MIZ7 849 aa16.16■□□□□ 0.18
PTCHD3-201ENST00000438700 IFNL3Q8IZI9 196 aa16.16■□□□□ 0.18
PTCHD3-201ENST00000438700 KCNF1Q9H3M0 494 aa16.16■□□□□ 0.18
PTCHD3-201ENST00000438700 GJB4Q9NTQ9 266 aa16.16■□□□□ 0.18
PTCHD3-201ENST00000438700 JAG2Q9Y219 1238 aa16.16■□□□□ 0.18
PTCHD3-201ENST00000438700 GSG1L2A8MUP6 293 aa16.16■□□□□ 0.18
PTCHD3-201ENST00000438700 ALX1Q15699 326 aa16.16■□□□□ 0.18
PTCHD3-201ENST00000438700 FBXL16Q8N461 479 aa16.16■□□□□ 0.18
PTCHD3-201ENST00000438700 CRAMP1Q96RY5 1269 aa16.16■□□□□ 0.18
PTCHD3-201ENST00000438700 NAPBQ9H115 298 aa16.16■□□□□ 0.18
PTCHD3-201ENST00000438700 SLC4A4Q9Y6R1 1079 aa16.16■□□□□ 0.18
PTCHD3-201ENST00000438700 CHD4Q14839 1912 aa16.16■□□□□ 0.18
PTCHD3-201ENST00000438700 CPLX1O14810 134 aa16.15■□□□□ 0.18
PTCHD3-201ENST00000438700 BBOX1O75936 387 aa16.15■□□□□ 0.18
PTCHD3-201ENST00000438700 TRDNQ13061 729 aa16.15■□□□□ 0.18
PTCHD3-201ENST00000438700 EZH2Q15910 746 aaKnown RBP16.15■□□□□ 0.18
PTCHD3-201ENST00000438700 ZNF384Q8TF68 577 aa16.15■□□□□ 0.18
PTCHD3-201ENST00000438700 BRIP1Q9BX63 1249 aa16.15■□□□□ 0.18
PTCHD3-201ENST00000438700 ZMYM6O95789 1325 aa16.15■□□□□ 0.18
PTCHD3-201ENST00000438700 UFL1O94874 794 aa16.15■□□□□ 0.18
PTCHD3-201ENST00000438700 GNAT2P19087 354 aa16.15■□□□□ 0.18
PTCHD3-201ENST00000438700 RXRAP19793 462 aa16.15■□□□□ 0.18
PTCHD3-201ENST00000438700 EN1Q05925 392 aaPredicted RBP16.15■□□□□ 0.18
PTCHD3-201ENST00000438700 PRIMPOLQ96LW4 560 aa16.15■□□□□ 0.18
PTCHD3-201ENST00000438700 MAGEB6P1A0A0J9YX57 407 aa16.14■□□□□ 0.17
PTCHD3-201ENST00000438700 CCAR1Q8IX12 1150 aaKnown RBP16.14■□□□□ 0.17
PTCHD3-201ENST00000438700 GOLPH3LQ9H4A5 285 aa16.14■□□□□ 0.17
PTCHD3-201ENST00000438700 INCENPQ9NQS7 918 aa16.14■□□□□ 0.17
PTCHD3-201ENST00000438700 ORC3Q9UBD5 711 aaPredicted RBP16.14■□□□□ 0.17
PTCHD3-201ENST00000438700 PARP3Q9Y6F1 533 aa16.14■□□□□ 0.17
PTCHD3-201ENST00000438700 B4E1Z4 1266 aa16.14■□□□□ 0.17
PTCHD3-201ENST00000438700 POLR3DP05423 398 aaPredicted RBP16.14■□□□□ 0.17
PTCHD3-201ENST00000438700 ME1P48163 572 aa16.14■□□□□ 0.17
PTCHD3-201ENST00000438700 CCDC88AQ3V6T2 1871 aa16.14■□□□□ 0.17
PTCHD3-201ENST00000438700 CYB5R4Q7L1T6 521 aa16.14■□□□□ 0.17
PTCHD3-201ENST00000438700 C8orf76Q96K31 380 aa16.14■□□□□ 0.17
PTCHD3-201ENST00000438700 RCOR1Q9UKL0 485 aa16.14■□□□□ 0.17
PTCHD3-201ENST00000438700 MAST2Q6P0Q8 1798 aa16.14■□□□□ 0.17
PTCHD3-201ENST00000438700 LRRC37AA6NMS7 1700 aa16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 IGSF3O75054 1194 aa16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 PRDX5P30044 214 aa16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 GTF2F1P35269 517 aaKnown RBP eCLIP16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 TDO2P48775 406 aa16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 MECOMQ03112 1051 aa16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 RBM43Q6ZSC3 357 aaKnown RBP16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 ZNF804AQ7Z570 1209 aa16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 KLHL34Q8N239 644 aa16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 NSUN4Q96CB9 384 aaKnown RBP16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 ZNF396Q96N95 335 aaPredicted RBP16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 CAMKK2Q96RR4 588 aa16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 NACAP1Q9BZK3 213 aa16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 DNAJC25Q9H1X3 360 aa16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 CBX8Q9HC52 389 aa16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 GGA1Q9UJY5 639 aa16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 COL11A2P13942 1736 aaPredicted RBP16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 DHX16O60231 1041 aaKnown RBP16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 ATP2B4P23634 1241 aa16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 DMTNQ08495 405 aa16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 RIOK1Q9BRS2 568 aaKnown RBP16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 SENP2Q9HC62 589 aa16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 SPTLC3Q9NUV7 552 aa16.13■□□□□ 0.17
PTCHD3-201ENST00000438700 PPEF1O14829 653 aaPredicted RBP16.12■□□□□ 0.17
PTCHD3-201ENST00000438700 DYNLL1P63167 89 aaKnown RBP16.12■□□□□ 0.17
PTCHD3-201ENST00000438700 C15orf52Q6ZUT6 534 aaKnown RBP16.12■□□□□ 0.17
PTCHD3-201ENST00000438700 CCDC144CPQ8IYA2 1237 aa16.12■□□□□ 0.17
PTCHD3-201ENST00000438700 SDR42E1Q8WUS8 393 aa16.12■□□□□ 0.17
PTCHD3-201ENST00000438700 ANGEL1Q9UNK9 670 aaKnown RBP16.12■□□□□ 0.17
PTCHD3-201ENST00000438700 NEDD4P46934 1319 aa16.12■□□□□ 0.17
PTCHD3-201ENST00000438700 TIAM2Q8IVF5 1701 aa16.12■□□□□ 0.17
PTCHD3-201ENST00000438700 RIOK3O14730 519 aaKnown RBP16.12■□□□□ 0.17
PTCHD3-201ENST00000438700 SRGNP10124 158 aa16.12■□□□□ 0.17
PTCHD3-201ENST00000438700 CTDSPL2Q05D32 466 aa16.12■□□□□ 0.17
PTCHD3-201ENST00000438700 TDRD7Q8NHU6 1098 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms