RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 GNGT1P63211 74 aa12.82□□□□□ -0.36
PTCH1-209ENST00000437951 KRT79Q5XKE5 535 aa12.82□□□□□ -0.36
PTCH1-209ENST00000437951 CCDC89Q8N998 374 aa12.82□□□□□ -0.36
PTCH1-209ENST00000437951 MORC4Q8TE76 937 aa12.82□□□□□ -0.36
PTCH1-209ENST00000437951 RTEL1-TNFRSF6BF6WH68 1400 aa12.82□□□□□ -0.36
PTCH1-209ENST00000437951 TSPY2A6NKD2 308 aa12.82□□□□□ -0.36
PTCH1-209ENST00000437951 ARID5AQ03989 594 aa12.82□□□□□ -0.36
PTCH1-209ENST00000437951 ASIC2Q16515 512 aa12.82□□□□□ -0.36
PTCH1-209ENST00000437951 THEMISQ8N1K5 641 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-209ENST00000437951 ESYT1Q9BSJ8 1104 aa12.82□□□□□ -0.36
PTCH1-209ENST00000437951 WDR46O15213 610 aaKnown RBP12.81□□□□□ -0.36
PTCH1-209ENST00000437951 CRNKL1Q9BZJ0 848 aaKnown RBP12.81□□□□□ -0.36
PTCH1-209ENST00000437951 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 TOP2BQ02880 1626 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 NCAPD3P42695 1498 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 KLF18A0A0U1RQI7 1052 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 GNAT2P19087 354 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 PSMD7P51665 324 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 KRT71Q3SY84 523 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 KIFC2Q96AC6 838 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 TRIM37O94972 964 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 PALM3A6NDB9 673 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-209ENST00000437951 CALUO43852 315 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-209ENST00000437951 APOEP02649 317 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 KRT15P19012 456 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 ZGPATQ8N5A5 531 aaKnown RBP12.81□□□□□ -0.36
PTCH1-209ENST00000437951 TRIM58Q8NG06 486 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 FGD5Q6ZNL6 1462 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 STX10O60499 249 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 TTC4O95801 387 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 LRRC43Q8N309 656 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 MRFAP1L1Q96HT8 127 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 ANGPTL2Q9UKU9 493 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 MLKLQ8NB16 471 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 POLE3Q9NRF9 147 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 TXLNGQ9NUQ3 528 aa12.81□□□□□ -0.36
PTCH1-209ENST00000437951 B4DLN1 442 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 MRPL12P52815 198 aaKnown RBP12.8□□□□□ -0.36
PTCH1-209ENST00000437951 LLPHQ9BRT6 129 aaKnown RBP12.8□□□□□ -0.36
PTCH1-209ENST00000437951 KIFC3Q9BVG8 833 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 RRP15Q9Y3B9 282 aaKnown RBP12.8□□□□□ -0.36
PTCH1-209ENST00000437951 WDR44Q5JSH3 913 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 RPGRQ92834 1020 aaKnown RBP12.8□□□□□ -0.36
PTCH1-209ENST00000437951 NOC4LQ9BVI4 516 aaKnown RBP12.8□□□□□ -0.36
PTCH1-209ENST00000437951 TTC41PQ6P2S7 1318 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 SYNRGQ9UMZ2 1314 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 CHMP2AO43633 222 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 DTHD1Q6ZMT9 781 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 TRIM27P14373 513 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 GNA11P29992 359 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 CTNNA1P35221 906 aaKnown RBP12.8□□□□□ -0.36
PTCH1-209ENST00000437951 TRIM42Q8IWZ5 723 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 DHX58Q96C10 678 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 EFHD1Q9BUP0 239 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 AQRO60306 1485 aaKnown RBP eCLIP12.8□□□□□ -0.363e-7■■■□□ 17
PTCH1-209ENST00000437951 ARHGEF9O43307 516 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 PCYT1AP49585 367 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 YY1AP1Q9H869 796 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 BAG5Q9UL15 447 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 POGZQ7Z3K3 1410 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 SYF2O95926 243 aaKnown RBP12.8□□□□□ -0.36
PTCH1-209ENST00000437951 HOXA7P31268 230 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-209ENST00000437951 TSC22D3Q99576 134 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 CDK19Q9BWU1 502 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 SPZ1Q9BXG8 430 aa12.8□□□□□ -0.36
PTCH1-209ENST00000437951 GJC1P36383 396 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 MCMDC2Q4G0Z9 681 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 BBOF1Q8ND07 529 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 SAR1BQ9Y6B6 198 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 ST13P4Q8IZP2 240 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-209ENST00000437951 PDZD8Q8NEN9 1154 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 PSPC1Q8WXF1 523 aaKnown RBP12.79□□□□□ -0.36
PTCH1-209ENST00000437951 PRDM11Q9NQV5 511 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 TNFAIP3P21580 790 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 SLC8A3P57103 927 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 TMED1Q13445 227 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 ASIC3Q9UHC3 531 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 CCDC197Q8NCU1 140 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 LRGUKQ96M69 825 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 PPANQ9NQ55 473 aaKnown RBP12.79□□□□□ -0.36
PTCH1-209ENST00000437951 DBF4Q9UBU7 674 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-209ENST00000437951 E9PMD0 336 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 TRIM60Q495X7 471 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 NME8Q8N427 588 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 ANKRD36BQ8N2N9 1353 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 POTEB3A0JP26 581 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 RBM26Q5T8P6 1007 aaKnown RBP12.79□□□□□ -0.36
PTCH1-209ENST00000437951 POTEBQ6S5H4 581 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 BCAS4Q8TDM0 211 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 RABEP2Q9H5N1 569 aa12.79□□□□□ -0.36
PTCH1-209ENST00000437951 CCDC169A6NNP5 214 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 MAP3K7O43318 606 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 NMIQ13287 307 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-209ENST00000437951 RPS6KA1Q15418 735 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 CCDC84Q86UT8 332 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-209ENST00000437951 CNOT10Q9H9A5 744 aaKnown RBP12.78□□□□□ -0.36
PTCH1-209ENST00000437951 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 CLTAP09496 248 aa12.78□□□□□ -0.36
PTCH1-209ENST00000437951 Q6ZUG5 572 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms