RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 HERC5Q9UII4 1024 aaKnown RBP13.8□□□□□ -0.2
SNHG3-202ENST00000437681 TMEM88BA6NKF7 163 aa13.8□□□□□ -0.2
SNHG3-202ENST00000437681 SBK1Q52WX2 424 aa13.8□□□□□ -0.2
SNHG3-202ENST00000437681 FOXP4Q8IVH2 680 aaPredicted RBP13.8□□□□□ -0.2
SNHG3-202ENST00000437681 TEX11Q8IYF3 940 aa13.8□□□□□ -0.2
SNHG3-202ENST00000437681 TEPSINQ96N21 525 aa13.8□□□□□ -0.2
SNHG3-202ENST00000437681 OSBPL5Q9H0X9 879 aaPredicted RBP13.8□□□□□ -0.2
SNHG3-202ENST00000437681 MKRN1Q9UHC7 482 aaKnown RBP13.8□□□□□ -0.2
SNHG3-202ENST00000437681 ZNF112Q9UJU3 913 aa13.8□□□□□ -0.2
SNHG3-202ENST00000437681 RBM26Q5T8P6 1007 aaKnown RBP13.79□□□□□ -0.2
SNHG3-202ENST00000437681 ARMC9Q7Z3E5 817 aa13.79□□□□□ -0.2
SNHG3-202ENST00000437681 USP48Q86UV5 1035 aa13.79□□□□□ -0.2
SNHG3-202ENST00000437681 DDRGK1Q96HY6 314 aa13.79□□□□□ -0.2
SNHG3-202ENST00000437681 FAM198AQ9UFP1 575 aa13.79□□□□□ -0.2
SNHG3-202ENST00000437681 TLL2Q9Y6L7 1015 aa13.79□□□□□ -0.2
SNHG3-202ENST00000437681 SIPA1L1O43166 1804 aa13.79□□□□□ -0.2
SNHG3-202ENST00000437681 ROBO3Q96MS0 1386 aa13.79□□□□□ -0.2
SNHG3-202ENST00000437681 NOL9Q5SY16 702 aaKnown RBP13.79□□□□□ -0.2
SNHG3-202ENST00000437681 DOCK1Q14185 1865 aa13.79□□□□□ -0.2
SNHG3-202ENST00000437681 RASA3Q14644 834 aa13.78□□□□□ -0.2
SNHG3-202ENST00000437681 C2orf69Q8N8R5 385 aa13.78□□□□□ -0.2
SNHG3-202ENST00000437681 SSC5DA1L4H1 1573 aa13.78□□□□□ -0.2
SNHG3-202ENST00000437681 PCP11498 1178 aaKnown RBP13.78□□□□□ -0.2
SNHG3-202ENST00000437681 HSPA6P17066 643 aa13.78□□□□□ -0.2
SNHG3-202ENST00000437681 SDSP20132 328 aa13.78□□□□□ -0.2
SNHG3-202ENST00000437681 MCMDC2Q4G0Z9 681 aa13.78□□□□□ -0.2
SNHG3-202ENST00000437681 TTC6Q86TZ1 520 aa13.78□□□□□ -0.2
SNHG3-202ENST00000437681 AIDAQ96BJ3 306 aa13.78□□□□□ -0.2
SNHG3-202ENST00000437681 PPP1R12BO60237 982 aaPredicted RBP13.77□□□□□ -0.2
SNHG3-202ENST00000437681 MAP1SQ66K74 1059 aaPredicted RBP13.77□□□□□ -0.2
SNHG3-202ENST00000437681 ADGRA1Q86SQ6 560 aa13.77□□□□□ -0.2
SNHG3-202ENST00000437681 AMOTL1Q8IY63 956 aa13.77□□□□□ -0.2
SNHG3-202ENST00000437681 STRBPQ96SI9 672 aaKnown RBP13.77□□□□□ -0.2
SNHG3-202ENST00000437681 ZNF341Q9BYN7 854 aa13.77□□□□□ -0.2
SNHG3-202ENST00000437681 GLIS2Q9BZE0 524 aaPredicted RBP13.77□□□□□ -0.2
SNHG3-202ENST00000437681 ARPP21Q9UBL0 812 aaPredicted RBP13.77□□□□□ -0.2
SNHG3-202ENST00000437681 SWAP70Q9UH65 585 aa13.77□□□□□ -0.2
SNHG3-202ENST00000437681 OTOFQ9HC10 1997 aa13.77□□□□□ -0.2
SNHG3-202ENST00000437681 FLT1P17948 1338 aa13.77□□□□□ -0.2
SNHG3-202ENST00000437681 RASSF10A6NK89 507 aa13.77□□□□□ -0.21
SNHG3-202ENST00000437681 HLA-DOAP06340 250 aa13.77□□□□□ -0.21
SNHG3-202ENST00000437681 POTEIP0CG38 1075 aa13.77□□□□□ -0.21
SNHG3-202ENST00000437681 POTEJP0CG39 1038 aa13.77□□□□□ -0.21
SNHG3-202ENST00000437681 IREB2P48200 963 aaKnown RBP13.77□□□□□ -0.21
SNHG3-202ENST00000437681 RGS3P49796 1198 aa13.77□□□□□ -0.21
SNHG3-202ENST00000437681 SH3RF3Q8TEJ3 882 aaPredicted RBP13.77□□□□□ -0.21
SNHG3-202ENST00000437681 GBA2Q9HCG7 927 aaPredicted RBP13.77□□□□□ -0.21
SNHG3-202ENST00000437681 AATFQ9NY61 560 aaKnown RBP eCLIP13.77□□□□□ -0.211e-34■□□□□ 11.1
SNHG3-202ENST00000437681 PI4KBQ9UBF8 816 aa13.77□□□□□ -0.21
SNHG3-202ENST00000437681 PATL2C9JE40 543 aaKnown RBP13.77□□□□□ -0.21
SNHG3-202ENST00000437681 LDLRAD1Q5T700 205 aa13.77□□□□□ -0.21
SNHG3-202ENST00000437681 NACAP1Q9BZK3 213 aa13.77□□□□□ -0.21
SNHG3-202ENST00000437681 VEZTQ9HBM0 779 aa13.77□□□□□ -0.21
SNHG3-202ENST00000437681 GSPT1P15170 499 aaKnown RBP13.76□□□□□ -0.21
SNHG3-202ENST00000437681 TRIM6-TRIM34B2RNG4 842 aa13.76□□□□□ -0.21
SNHG3-202ENST00000437681 CLRN2A0PK11 232 aa13.75□□□□□ -0.21
SNHG3-202ENST00000437681 ADM5C9JUS6 153 aa13.75□□□□□ -0.21
SNHG3-202ENST00000437681 CASC1Q6TDU7 716 aa13.75□□□□□ -0.21
SNHG3-202ENST00000437681 DSCC1Q9BVC3 393 aa13.75□□□□□ -0.21
SNHG3-202ENST00000437681 ATAD5Q96QE3 1844 aa13.75□□□□□ -0.21
SNHG3-202ENST00000437681 ASTN2O75129 1339 aaPredicted RBP13.75□□□□□ -0.21
SNHG3-202ENST00000437681 CCDC171Q6TFL3 1326 aa13.75□□□□□ -0.21
SNHG3-202ENST00000437681 MBD4O95243 580 aa13.75□□□□□ -0.21
SNHG3-202ENST00000437681 USP5P45974 858 aa13.75□□□□□ -0.21
SNHG3-202ENST00000437681 PPP4R3BQ5MIZ7 849 aa13.75□□□□□ -0.21
SNHG3-202ENST00000437681 OSBP2Q969R2 916 aa13.75□□□□□ -0.21
SNHG3-202ENST00000437681 CCDC102AQ96A19 550 aa13.75□□□□□ -0.21
SNHG3-202ENST00000437681 EDC3Q96F86 508 aaKnown RBP13.75□□□□□ -0.21
SNHG3-202ENST00000437681 ZNF287Q9HBT7 754 aa13.75□□□□□ -0.21
SNHG3-202ENST00000437681 DIAPH3Q9NSV4 1193 aa13.75□□□□□ -0.21
SNHG3-202ENST00000437681 ANAPC4Q9UJX5 808 aa13.75□□□□□ -0.21
SNHG3-202ENST00000437681 PCDHAC2Q9Y5I4 1007 aa13.75□□□□□ -0.21
SNHG3-202ENST00000437681 TCP10L2B9ZVM9 353 aa13.74□□□□□ -0.21
SNHG3-202ENST00000437681 GPAA1O43292 621 aa13.74□□□□□ -0.21
SNHG3-202ENST00000437681 ECE1P42892 770 aa13.74□□□□□ -0.21
SNHG3-202ENST00000437681 RBM10P98175 930 aaKnown RBP13.74□□□□□ -0.21
SNHG3-202ENST00000437681 ZMYND15Q9H091 742 aa13.74□□□□□ -0.21
SNHG3-202ENST00000437681 DCP1AQ9NPI6 582 aaPredicted RBP13.74□□□□□ -0.21
SNHG3-202ENST00000437681 SYNPO2Q9UMS6 1093 aa13.74□□□□□ -0.21
SNHG3-202ENST00000437681 GREB1LQ9C091 1923 aaPredicted RBP13.74□□□□□ -0.21
SNHG3-202ENST00000437681 MYH8P13535 1937 aa13.74□□□□□ -0.21
SNHG3-202ENST00000437681 CELF2O95319 508 aaKnown RBP13.74□□□□□ -0.21
SNHG3-202ENST00000437681 CST9Q5W186 159 aa13.74□□□□□ -0.21
SNHG3-202ENST00000437681 ANKRD13AQ8IZ07 590 aa13.74□□□□□ -0.21
SNHG3-202ENST00000437681 LCORLQ8N3X6 602 aa13.74□□□□□ -0.21
SNHG3-202ENST00000437681 PUS7LQ9H0K6 701 aaKnown RBP13.74□□□□□ -0.21
SNHG3-202ENST00000437681 DDX4Q9NQI0 724 aaKnown RBP13.74□□□□□ -0.21
SNHG3-202ENST00000437681 TSHZ3Q63HK5 1081 aa13.73□□□□□ -0.21
SNHG3-202ENST00000437681 NDUFB9Q9Y6M9 179 aa13.73□□□□□ -0.21
SNHG3-202ENST00000437681 CTNND1O60716 968 aaKnown RBP13.73□□□□□ -0.21
SNHG3-202ENST00000437681 CHMLP26374 656 aa13.73□□□□□ -0.21
SNHG3-202ENST00000437681 DYNLL1P63167 89 aaKnown RBP13.73□□□□□ -0.21
SNHG3-202ENST00000437681 MAP3K9P80192 1104 aa13.73□□□□□ -0.21
SNHG3-202ENST00000437681 NFIAQ12857 509 aa13.73□□□□□ -0.21
SNHG3-202ENST00000437681 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNHG3-202ENST00000437681 TGFBRAP1Q8WUH2 860 aa13.73□□□□□ -0.21
SNHG3-202ENST00000437681 RILPL2Q969X0 211 aa13.73□□□□□ -0.21
SNHG3-202ENST00000437681 CTNNA3Q9UI47 895 aa13.73□□□□□ -0.21
SNHG3-202ENST00000437681 USP2O75604 605 aaPredicted RBP13.72□□□□□ -0.21
SNHG3-202ENST00000437681 SLC3A2P08195 630 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms