RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 ALPK3Q96L96 1907 aa18.54■□□□□ 0.56
HDAC8-213ENST00000436675 EYA2O00167 538 aa18.53■□□□□ 0.56
HDAC8-213ENST00000436675 ZSCAN29Q8IWY8 852 aaPredicted RBP18.53■□□□□ 0.56
HDAC8-213ENST00000436675 LPIN2Q92539 896 aa18.53■□□□□ 0.56
HDAC8-213ENST00000436675 LRCH3Q96II8 777 aa18.53■□□□□ 0.56
HDAC8-213ENST00000436675 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.53■□□□□ 0.56
HDAC8-213ENST00000436675 STAP2Q9UGK3 403 aa18.53■□□□□ 0.56
HDAC8-213ENST00000436675 A0A0G2JLL6 359 aaPredicted RBP18.52■□□□□ 0.56
HDAC8-213ENST00000436675 PHF20L1A8MW92 1017 aa18.52■□□□□ 0.56
HDAC8-213ENST00000436675 TNPO2O14787 897 aaKnown RBP18.52■□□□□ 0.56
HDAC8-213ENST00000436675 RGS3P49796 1198 aa18.52■□□□□ 0.56
HDAC8-213ENST00000436675 FASTKD5Q7L8L6 764 aaKnown RBP18.52■□□□□ 0.56
HDAC8-213ENST00000436675 PRRT2Q7Z6L0 340 aaPredicted RBP18.52■□□□□ 0.56
HDAC8-213ENST00000436675 CCDC84Q86UT8 332 aaPredicted RBP18.52■□□□□ 0.56
HDAC8-213ENST00000436675 SCYL3Q8IZE3 742 aa18.52■□□□□ 0.56
HDAC8-213ENST00000436675 MRPL50Q8N5N7 158 aaKnown RBP18.52■□□□□ 0.56
HDAC8-213ENST00000436675 USP44Q9H0E7 712 aa18.52■□□□□ 0.56
HDAC8-213ENST00000436675 SIL1Q9H173 461 aa18.52■□□□□ 0.56
HDAC8-213ENST00000436675 PTPRAP18433 802 aa18.51■□□□□ 0.55
HDAC8-213ENST00000436675 RFX5P48382 616 aaPredicted RBP18.51■□□□□ 0.55
HDAC8-213ENST00000436675 SMCR8Q8TEV9 937 aaPredicted RBP18.51■□□□□ 0.55
HDAC8-213ENST00000436675 AFG3L2Q9Y4W6 797 aa18.51■□□□□ 0.55
HDAC8-213ENST00000436675 LRRFIP2Q9Y608 721 aaKnown RBP18.51■□□□□ 0.55
HDAC8-213ENST00000436675 PHIPQ8WWQ0 1821 aa18.51■□□□□ 0.55
HDAC8-213ENST00000436675 DOCK1Q14185 1865 aa18.5■□□□□ 0.55
HDAC8-213ENST00000436675 TRIM75PA6NK02 468 aa18.5■□□□□ 0.55
HDAC8-213ENST00000436675 ATP2B3Q16720 1220 aa18.5■□□□□ 0.55
HDAC8-213ENST00000436675 SH3BP5LQ7L8J4 393 aa18.5■□□□□ 0.55
HDAC8-213ENST00000436675 ATG9AQ7Z3C6 839 aa18.5■□□□□ 0.55
HDAC8-213ENST00000436675 PAWRQ96IZ0 340 aaKnown RBP18.5■□□□□ 0.55
HDAC8-213ENST00000436675 ATRNL1Q5VV63 1379 aa18.5■□□□□ 0.55
HDAC8-213ENST00000436675 LAMA3Q16787 3333 aa18.5■□□□□ 0.55
HDAC8-213ENST00000436675 PHKA1P46020 1223 aa18.49■□□□□ 0.55
HDAC8-213ENST00000436675 PICALMQ13492 652 aa18.49■□□□□ 0.55
HDAC8-213ENST00000436675 FAM9BQ8IZU0 186 aa18.49■□□□□ 0.55
HDAC8-213ENST00000436675 ANKRD13CQ8N6S4 541 aa18.49■□□□□ 0.55
HDAC8-213ENST00000436675 DIS3LQ8TF46 1054 aaKnown RBP18.49■□□□□ 0.55
HDAC8-213ENST00000436675 GNL3LQ9NVN8 582 aaKnown RBP18.49■□□□□ 0.55
HDAC8-213ENST00000436675 PXYLP1Q8TE99 480 aa18.48■□□□□ 0.55
HDAC8-213ENST00000436675 DDTLA6NHG4 134 aaPredicted RBP18.47■□□□□ 0.55
HDAC8-213ENST00000436675 ENTPD3O75355 529 aa18.47■□□□□ 0.55
HDAC8-213ENST00000436675 IRF5Q13568 498 aa18.47■□□□□ 0.55
HDAC8-213ENST00000436675 C7orf61Q8IZ16 206 aa18.47■□□□□ 0.55
HDAC8-213ENST00000436675 COA7Q96BR5 231 aa18.47■□□□□ 0.55
HDAC8-213ENST00000436675 CEP126Q9P2H0 1117 aa18.47■□□□□ 0.55
HDAC8-213ENST00000436675 DENND2AQ9ULE3 1009 aa18.47■□□□□ 0.55
HDAC8-213ENST00000436675 ZMYND8Q9ULU4 1186 aaPredicted RBP18.47■□□□□ 0.55
HDAC8-213ENST00000436675 A0A1W2PPC1 479 aa18.46■□□□□ 0.55
HDAC8-213ENST00000436675 FAM196BA6NMK8 535 aa18.46■□□□□ 0.55
HDAC8-213ENST00000436675 ADORA1P30542 326 aa18.46■□□□□ 0.55
HDAC8-213ENST00000436675 TREML2Q5T2D2 321 aa18.46■□□□□ 0.55
HDAC8-213ENST00000436675 IDI2Q9BXS1 227 aa18.46■□□□□ 0.55
HDAC8-213ENST00000436675 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.46■□□□□ 0.55
HDAC8-213ENST00000436675 DDX4Q9NQI0 724 aaKnown RBP18.46■□□□□ 0.55
HDAC8-213ENST00000436675 PAK6Q9NQU5 681 aaPredicted RBP18.46■□□□□ 0.55
HDAC8-213ENST00000436675 SLC45A1Q9Y2W3 748 aa18.46■□□□□ 0.55
HDAC8-213ENST00000436675 PTPRCP08575 1304 aa18.46■□□□□ 0.55
HDAC8-213ENST00000436675 CTNND1O60716 968 aaKnown RBP18.45■□□□□ 0.54
HDAC8-213ENST00000436675 NECAB2Q7Z6G3 386 aa18.45■□□□□ 0.54
HDAC8-213ENST00000436675 DZIP1Q86YF9 867 aaKnown RBP18.45■□□□□ 0.54
HDAC8-213ENST00000436675 SSH1Q8WYL5 1049 aa18.45■□□□□ 0.54
HDAC8-213ENST00000436675 CRISPLD2Q9H0B8 497 aa18.45■□□□□ 0.54
HDAC8-213ENST00000436675 ABCF2Q9UG63 623 aa18.45■□□□□ 0.54
HDAC8-213ENST00000436675 AGTPBP1Q9UPW5 1226 aa18.45■□□□□ 0.54
HDAC8-213ENST00000436675 SALL1Q9NSC2 1324 aa18.45■□□□□ 0.54
HDAC8-213ENST00000436675 ANP32CO43423 234 aa18.44■□□□□ 0.54
HDAC8-213ENST00000436675 BTDP43251 543 aa18.44■□□□□ 0.54
HDAC8-213ENST00000436675 PA2G4Q9UQ80 394 aaKnown RBP18.44■□□□□ 0.54
HDAC8-213ENST00000436675 GAKO14976 1311 aa18.44■□□□□ 0.54
HDAC8-213ENST00000436675 TRIM32Q13049 653 aa18.43■□□□□ 0.54
HDAC8-213ENST00000436675 ATAD5Q96QE3 1844 aa18.43■□□□□ 0.54
HDAC8-213ENST00000436675 RFX7Q2KHR2 1363 aa18.42■□□□□ 0.54
HDAC8-213ENST00000436675 SEMA3EO15041 775 aa18.42■□□□□ 0.54
HDAC8-213ENST00000436675 SYN1P17600 705 aa18.42■□□□□ 0.54
HDAC8-213ENST00000436675 MAP3K10Q02779 954 aa18.42■□□□□ 0.54
HDAC8-213ENST00000436675 CCDC102BQ68D86 513 aa18.42■□□□□ 0.54
HDAC8-213ENST00000436675 Q7L0L9 218 aa18.42■□□□□ 0.54
HDAC8-213ENST00000436675 ZGPATQ8N5A5 531 aaKnown RBP18.42■□□□□ 0.54
HDAC8-213ENST00000436675 DDX60LQ5H9U9 1706 aaKnown RBP18.41■□□□□ 0.54
HDAC8-213ENST00000436675 CIAO1O76071 339 aa18.41■□□□□ 0.54
HDAC8-213ENST00000436675 SPP2Q13103 211 aa18.41■□□□□ 0.54
HDAC8-213ENST00000436675 RASGRF1Q13972 1273 aa18.41■□□□□ 0.54
HDAC8-213ENST00000436675 FAM110CQ1W6H9 321 aa18.41■□□□□ 0.54
HDAC8-213ENST00000436675 GDF15Q99988 308 aa18.41■□□□□ 0.54
HDAC8-213ENST00000436675 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.41■□□□□ 0.54
HDAC8-213ENST00000436675 PNMA3Q9UL41 463 aa18.41■□□□□ 0.54
HDAC8-213ENST00000436675 HMGCRP04035 888 aa18.4■□□□□ 0.54
HDAC8-213ENST00000436675 UBTFL1P0CB47 393 aaPredicted RBP18.4■□□□□ 0.54
HDAC8-213ENST00000436675 HMGCS2P54868 508 aa18.4■□□□□ 0.54
HDAC8-213ENST00000436675 TIMM10P62072 90 aa18.4■□□□□ 0.54
HDAC8-213ENST00000436675 SLF2Q8IX21 1173 aa18.4■□□□□ 0.54
HDAC8-213ENST00000436675 DEFB123Q8N688 67 aa18.4■□□□□ 0.54
HDAC8-213ENST00000436675 CAPN2P17655 700 aa18.39■□□□□ 0.53
HDAC8-213ENST00000436675 IL15P40933 162 aaPredicted RBP18.39■□□□□ 0.53
HDAC8-213ENST00000436675 HMX1Q9NP08 348 aaPredicted RBP18.39■□□□□ 0.53
HDAC8-213ENST00000436675 MROH7-TTC4A0A0A0MT08 1334 aa18.39■□□□□ 0.53
HDAC8-213ENST00000436675 LOC285556D6RIA3 1793 aa18.39■□□□□ 0.53
HDAC8-213ENST00000436675 PLXNB2O15031 1838 aa18.39■□□□□ 0.53
HDAC8-213ENST00000436675 BMP8BP34820 402 aa18.38■□□□□ 0.53
HDAC8-213ENST00000436675 MECOMQ03112 1051 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 356.2 ms