RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 MAP3K2Q9Y2U5 619 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 CHMP3Q9Y3E7 222 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 SPTLC2O15270 562 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 N4BP1O75113 896 aaKnown RBP4.28□□□□□ -1.72
SHPRH-205ENST00000433355 FOSP01100 380 aaPredicted RBP4.28□□□□□ -1.72
SHPRH-205ENST00000433355 CCDC175P0C221 793 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 RBM43Q6ZSC3 357 aaKnown RBP4.28□□□□□ -1.72
SHPRH-205ENST00000433355 TAOK3Q9H2K8 898 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 ZPR1O75312 459 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 HSPA6P17066 643 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 RC3H1Q5TC82 1133 aaKnown RBP4.28□□□□□ -1.72
SHPRH-205ENST00000433355 TTC6Q86TZ1 520 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 TMTC1Q8IUR5 882 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 SLC26A8Q96RN1 970 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 AGXT2Q9BYV1 514 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 KRT86O43790 486 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 IFNAR1P17181 557 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 TPD52L1Q16890 204 aaPredicted RBP4.28□□□□□ -1.72
SHPRH-205ENST00000433355 SLC27A3Q5K4L6 730 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 ZMYM1Q5SVZ6 1142 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 JAKMIP2Q96AA8 810 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 CNNM1Q9NRU3 951 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 ATP8A2Q9NTI2 1148 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 GFPT2O94808 682 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 SYT1P21579 422 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 CMA1P23946 247 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 SNRPFP62306 86 aaKnown RBP4.28□□□□□ -1.72
SHPRH-205ENST00000433355 PROM2Q8N271 834 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 ZBTB38Q8NAP3 1195 aaPredicted RBP4.28□□□□□ -1.72
SHPRH-205ENST00000433355 C8orf58Q8NAV2 365 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 CEP89Q96ST8 783 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 DNAI1Q9UI46 699 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 NUP98P52948 1817 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 USO1O60763 962 aaKnown RBP4.28□□□□□ -1.72
SHPRH-205ENST00000433355 METAP2P50579 478 aaKnown RBP eCLIP4.28□□□□□ -1.72
SHPRH-205ENST00000433355 ZNF710Q8N1W2 664 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 TSG101Q99816 390 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 MYL5Q02045 173 aa4.28□□□□□ -1.73
SHPRH-205ENST00000433355 MEIS3Q99687 375 aa4.28□□□□□ -1.73
SHPRH-205ENST00000433355 FAM184BQ9ULE4 1060 aa4.28□□□□□ -1.73
SHPRH-205ENST00000433355 BAZ2BQ9UIF8 2168 aaKnown RBP4.28□□□□□ -1.73
SHPRH-205ENST00000433355 ZBTB43O43298 467 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 MAN1A1P33908 653 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 ZSCAN23Q3MJ62 389 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 PRPF40BQ6NWY9 871 aaKnown RBP4.27□□□□□ -1.73
SHPRH-205ENST00000433355 CDK5RAP3Q96JB5 506 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 CCDC17Q96LX7 622 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.27□□□□□ -1.73
SHPRH-205ENST00000433355 EXOC6BQ9Y2D4 811 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 KIAA0391O15091 583 aaKnown RBP4.27□□□□□ -1.73
SHPRH-205ENST00000433355 VPS33BQ9H267 617 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 DHX36Q9H2U1 1008 aaKnown RBP4.27□□□□□ -1.73
SHPRH-205ENST00000433355 C4AP0C0L4 1744 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 C4BP0C0L5 1744 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 MCTP1Q6DN14 999 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 PHACTR1Q9C0D0 580 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 ZNF213O14771 459 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 CYP2E1P05181 493 aaPredicted RBP4.27□□□□□ -1.73
SHPRH-205ENST00000433355 TDO2P48775 406 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 SNX16P57768 344 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 METTL24Q5JXM2 366 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 KIRREL3Q8IZU9 778 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 CNKSR2Q8WXI2 1034 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 MKRN1Q9UHC7 482 aaKnown RBP4.27□□□□□ -1.73
SHPRH-205ENST00000433355 WNK3Q9BYP7 1800 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 BCL9LQ86UU0 1499 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 CASZ1Q86V15 1759 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 HMGB3O15347 200 aaKnown RBP4.27□□□□□ -1.73
SHPRH-205ENST00000433355 FIBPO43427 364 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 ENPEPQ07075 957 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 CNTRLQ7Z7A1 2325 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 DEF6Q9H4E7 631 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 STK17AQ9UEE5 414 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 LAMB1P07942 1786 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 SRRM3A6NNA2 597 aaPredicted RBP4.27□□□□□ -1.73
SHPRH-205ENST00000433355 ARID4AP29374 1257 aaPredicted RBP4.27□□□□□ -1.73
SHPRH-205ENST00000433355 HDLBPQ00341 1268 aaKnown RBP4.27□□□□□ -1.73
SHPRH-205ENST00000433355 MSANTD4Q8NCY6 345 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 LRP5O75197 1615 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 SALL1Q9NSC2 1324 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 PPP6R2O75170 966 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 ST5P78524 1137 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 CREB3L3Q68CJ9 461 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 NFATC2IPQ8NCF5 419 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 SPTLC3Q9NUV7 552 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 PDE8AO60658 829 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 ATP6V1AP38606 617 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 TCIRG1Q13488 830 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 CNNM4Q6P4Q7 775 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 UBXN4Q92575 508 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 NGLY1Q96IV0 654 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 ANO9A1A5B4 782 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 EIF2S2P20042 333 aaKnown RBP4.27□□□□□ -1.73
SHPRH-205ENST00000433355 NOSTRINQ8IVI9 506 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 RYDENQ9NUL5 291 aaKnown RBP4.27□□□□□ -1.73
SHPRH-205ENST00000433355 SALL3Q9BXA9 1300 aa4.27□□□□□ -1.73
SHPRH-205ENST00000433355 LMNB1P20700 586 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 MOXD1Q6UVY6 613 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 RUFY1Q96T51 708 aa4.26□□□□□ -1.73
SHPRH-205ENST00000433355 RASSF4Q9H2L5 321 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms