RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 NPM3O75607 178 aaKnown RBP31.46■■■□□ 2.63
TMEM248-205ENST00000433271 ANAPC4Q9UJX5 808 aa31.46■■■□□ 2.63
TMEM248-205ENST00000433271 ECM29Q5VYK3 1845 aa31.45■■■□□ 2.62
TMEM248-205ENST00000433271 BAZ2AQ9UIF9 1905 aaKnown RBP31.45■■■□□ 2.62
TMEM248-205ENST00000433271 FOCADQ5VW36 1801 aa31.44■■■□□ 2.62
TMEM248-205ENST00000433271 MINDY4BA8MYZ0 360 aa31.44■■■□□ 2.62
TMEM248-205ENST00000433271 MYO1BO43795 1136 aa31.44■■■□□ 2.62
TMEM248-205ENST00000433271 PPARAQ07869 468 aa31.44■■■□□ 2.62
TMEM248-205ENST00000433271 RABEP1Q15276 862 aa31.44■■■□□ 2.62
TMEM248-205ENST00000433271 TM6SF1Q9BZW5 370 aa31.44■■■□□ 2.62
TMEM248-205ENST00000433271 DDX4Q9NQI0 724 aaKnown RBP31.44■■■□□ 2.62
TMEM248-205ENST00000433271 NFIAQ12857 509 aa31.43■■■□□ 2.62
TMEM248-205ENST00000433271 PICALMQ13492 652 aa31.43■■■□□ 2.62
TMEM248-205ENST00000433271 ADCK5Q3MIX3 580 aa31.43■■■□□ 2.62
TMEM248-205ENST00000433271 SPDYE2Q495Y8 402 aa31.43■■■□□ 2.62
TMEM248-205ENST00000433271 SAMD7Q7Z3H4 446 aa31.43■■■□□ 2.62
TMEM248-205ENST00000433271 AMOTL1Q8IY63 956 aa31.43■■■□□ 2.62
TMEM248-205ENST00000433271 NBPF3Q9H094 633 aa31.43■■■□□ 2.62
TMEM248-205ENST00000433271 TMOD2Q9NZR1 351 aa31.43■■■□□ 2.62
TMEM248-205ENST00000433271 ZNF70Q9UC06 446 aaPredicted RBP31.43■■■□□ 2.62
TMEM248-205ENST00000433271 E7EWF7 191 aa31.42■■■□□ 2.62
TMEM248-205ENST00000433271 PSMA5P28066 241 aa31.42■■■□□ 2.62
TMEM248-205ENST00000433271 NBPF9Q3BBW0 867 aa31.42■■■□□ 2.62
TMEM248-205ENST00000433271 RBM26Q5T8P6 1007 aaKnown RBP31.42■■■□□ 2.62
TMEM248-205ENST00000433271 LAMA4Q16363 1823 aa31.42■■■□□ 2.62
TMEM248-205ENST00000433271 EGFRP00533 1210 aa31.42■■■□□ 2.62
TMEM248-205ENST00000433271 CACNB3P54284 484 aa31.42■■■□□ 2.62
TMEM248-205ENST00000433271 C12orf60Q5U649 245 aa31.42■■■□□ 2.62
TMEM248-205ENST00000433271 JAKMIP1Q96N16 626 aaKnown RBP31.42■■■□□ 2.62
TMEM248-205ENST00000433271 CYP2D7A0A087X1C5 515 aa31.41■■■□□ 2.62
TMEM248-205ENST00000433271 GLTPD2A6NH11 291 aa31.41■■■□□ 2.62
TMEM248-205ENST00000433271 LMOD1P29536 600 aaPredicted RBP31.41■■■□□ 2.62
TMEM248-205ENST00000433271 KIF4BQ2VIQ3 1234 aa31.41■■■□□ 2.62
TMEM248-205ENST00000433271 TBC1D10BQ4KMP7 808 aaPredicted RBP31.41■■■□□ 2.62
TMEM248-205ENST00000433271 FKBP1CQ5VVH2 108 aa31.41■■■□□ 2.62
TMEM248-205ENST00000433271 STOX1Q6ZVD7 989 aa31.41■■■□□ 2.62
TMEM248-205ENST00000433271 L3MBTL3Q96JM7 780 aaPredicted RBP31.41■■■□□ 2.62
TMEM248-205ENST00000433271 OSBPL5Q9H0X9 879 aaPredicted RBP31.41■■■□□ 2.62
TMEM248-205ENST00000433271 FAM198AQ9UFP1 575 aa31.41■■■□□ 2.62
TMEM248-205ENST00000433271 SAP30BPQ9UHR5 308 aaKnown RBP31.41■■■□□ 2.62
TMEM248-205ENST00000433271 NAV1Q8NEY1 1877 aa31.4■■■□□ 2.62
TMEM248-205ENST00000433271 POLR3DP05423 398 aaPredicted RBP31.4■■■□□ 2.62
TMEM248-205ENST00000433271 EPS15P42566 896 aa31.4■■■□□ 2.62
TMEM248-205ENST00000433271 CTDSPL2Q05D32 466 aa31.4■■■□□ 2.62
TMEM248-205ENST00000433271 TBC1D10CQ8IV04 446 aa31.4■■■□□ 2.62
TMEM248-205ENST00000433271 CLRN2A0PK11 232 aa31.39■■■□□ 2.62
TMEM248-205ENST00000433271 ENTPD3O75355 529 aa31.39■■■□□ 2.62
TMEM248-205ENST00000433271 NEK1Q96PY6 1258 aa31.39■■■□□ 2.62
TMEM248-205ENST00000433271 ZSWIM6Q9HCJ5 1215 aa31.39■■■□□ 2.62
TMEM248-205ENST00000433271 CYP2D6P10635 497 aa31.38■■■□□ 2.61
TMEM248-205ENST00000433271 CASTP20810 708 aaKnown RBP31.38■■■□□ 2.61
TMEM248-205ENST00000433271 AKNAD1Q5T1N1 836 aa31.38■■■□□ 2.61
TMEM248-205ENST00000433271 IL27Q8NEV9 243 aa31.38■■■□□ 2.61
TMEM248-205ENST00000433271 DDX60LQ5H9U9 1706 aaKnown RBP31.38■■■□□ 2.61
TMEM248-205ENST00000433271 SLC3A2P08195 630 aaKnown RBP31.38■■■□□ 2.61
TMEM248-205ENST00000433271 STAG1Q8WVM7 1258 aa31.38■■■□□ 2.61
TMEM248-205ENST00000433271 RNF41Q9H4P4 317 aaPredicted RBP31.38■■■□□ 2.61
TMEM248-205ENST00000433271 ANP32AP39687 249 aaKnown RBP31.37■■■□□ 2.61
TMEM248-205ENST00000433271 MFSD6Q6ZSS7 791 aa31.37■■■□□ 2.61
TMEM248-205ENST00000433271 TTC6Q86TZ1 520 aa31.37■■■□□ 2.61
TMEM248-205ENST00000433271 UPF3BQ9BZI7 483 aaKnown RBP31.37■■■□□ 2.61
TMEM248-205ENST00000433271 MYH1P12882 1939 aa31.36■■■□□ 2.61
TMEM248-205ENST00000433271 SMIM22K7EJ46 135 aa31.36■■■□□ 2.61
TMEM248-205ENST00000433271 HMGB1P09429 215 aaKnown RBP31.36■■■□□ 2.61
TMEM248-205ENST00000433271 PCP11498 1178 aaKnown RBP31.36■■■□□ 2.61
TMEM248-205ENST00000433271 PLCD1P51178 756 aa31.36■■■□□ 2.61
TMEM248-205ENST00000433271 TCP10Q12799 353 aa31.36■■■□□ 2.61
TMEM248-205ENST00000433271 ZFPM1Q8IX07 1006 aa31.36■■■□□ 2.61
TMEM248-205ENST00000433271 DHX36Q9H2U1 1008 aaKnown RBP31.36■■■□□ 2.61
TMEM248-205ENST00000433271 ADARB2Q9NS39 739 aaKnown RBP31.36■■■□□ 2.61
TMEM248-205ENST00000433271 CYP46A1Q9Y6A2 500 aa31.36■■■□□ 2.61
TMEM248-205ENST00000433271 NEK4P51957 841 aa31.35■■■□□ 2.61
TMEM248-205ENST00000433271 TRDNQ13061 729 aa31.35■■■□□ 2.61
TMEM248-205ENST00000433271 BLOC1S2Q6QNY1 142 aa31.35■■■□□ 2.61
TMEM248-205ENST00000433271 RUFY3Q7L099 469 aa31.35■■■□□ 2.61
TMEM248-205ENST00000433271 NCOA7Q8NI08 942 aa31.35■■■□□ 2.61
TMEM248-205ENST00000433271 CNNM2Q9H8M5 875 aa31.35■■■□□ 2.61
TMEM248-205ENST00000433271 VEZTQ9HBM0 779 aa31.35■■■□□ 2.61
TMEM248-205ENST00000433271 LAMB1P07942 1786 aa31.35■■■□□ 2.61
TMEM248-205ENST00000433271 TCP10L2B9ZVM9 353 aa31.35■■■□□ 2.61
TMEM248-205ENST00000433271 FGRP09769 529 aa31.35■■■□□ 2.61
TMEM248-205ENST00000433271 EVX2Q03828 476 aa31.35■■■□□ 2.61
TMEM248-205ENST00000433271 SLC4A8Q2Y0W8 1093 aa31.35■■■□□ 2.61
TMEM248-205ENST00000433271 TRPM4Q8TD43 1214 aa31.35■■■□□ 2.61
TMEM248-205ENST00000433271 ROBO3Q96MS0 1386 aa31.34■■■□□ 2.61
TMEM248-205ENST00000433271 FAM83AQ86UY5 434 aa31.34■■■□□ 2.61
TMEM248-205ENST00000433271 TACC3Q9Y6A5 838 aa31.34■■■□□ 2.61
TMEM248-205ENST00000433271 RALYLQ86SE5 291 aaKnown RBP31.33■■■□□ 2.61
TMEM248-205ENST00000433271 FAM151AQ8WW52 585 aa31.33■■■□□ 2.61
TMEM248-205ENST00000433271 KRT23Q9C075 422 aa31.33■■■□□ 2.61
TMEM248-205ENST00000433271 INCENPQ9NQS7 918 aa31.33■■■□□ 2.61
TMEM248-205ENST00000433271 COL2A1P02458 1487 aaPredicted RBP31.33■■■□□ 2.61
TMEM248-205ENST00000433271 STK11IPQ8N1F8 1099 aa31.32■■■□□ 2.6
TMEM248-205ENST00000433271 ATRNL1Q5VV63 1379 aa31.32■■■□□ 2.6
TMEM248-205ENST00000433271 NEDD4P46934 1319 aa31.32■■■□□ 2.6
TMEM248-205ENST00000433271 ST18O60284 1047 aa31.31■■■□□ 2.6
TMEM248-205ENST00000433271 HLA-DOAP06340 250 aa31.31■■■□□ 2.6
TMEM248-205ENST00000433271 CPA1P15085 419 aa31.31■■■□□ 2.6
TMEM248-205ENST00000433271 RPS6KB1P23443 525 aa31.31■■■□□ 2.6
TMEM248-205ENST00000433271 HIRAP54198 1017 aaPredicted RBP31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms