RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 CORO1BQ9BR76 489 aa4.14□□□□□ -1.75
CDC40-204ENST00000431461 TNKS2Q9H2K2 1166 aa4.14□□□□□ -1.75
CDC40-204ENST00000431461 TMPRSS5Q9H3S3 457 aa4.14□□□□□ -1.75
CDC40-204ENST00000431461 CTNND2Q9UQB3 1225 aa4.14□□□□□ -1.75
CDC40-204ENST00000431461 A0A1W2PP55 124 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 FZD6O60353 706 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 AOC2O75106 756 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 B3GALT4O96024 378 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 HOXA5P20719 270 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 KCNA10Q16322 511 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 SPRED3Q2MJR0 410 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 KIAA0319Q5VV43 1072 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 FYB2Q5VWT5 728 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 MPZL3Q6UWV2 235 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 GALNT12Q8IXK2 581 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 GJD3Q8N144 294 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 TRIM56Q9BRZ2 755 aaKnown RBP4.13□□□□□ -1.75
CDC40-204ENST00000431461 ZC3H12CQ9C0D7 883 aaKnown RBP4.13□□□□□ -1.75
CDC40-204ENST00000431461 LIN7BQ9HAP6 207 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 KCNK12Q9HB15 430 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 CD320Q9NPF0 282 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 SERPINA10Q9UK55 444 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 PPP1R9AQ9ULJ8 1098 aa4.13□□□□□ -1.75
CDC40-204ENST00000431461 NPIPB6E9PJ23 425 aa4.12□□□□□ -1.75
CDC40-204ENST00000431461 GLDCP23378 1020 aa4.12□□□□□ -1.75
CDC40-204ENST00000431461 ITPKAP23677 461 aa4.12□□□□□ -1.75
CDC40-204ENST00000431461 OXCT1P55809 520 aa4.12□□□□□ -1.75
CDC40-204ENST00000431461 FKBP4Q02790 459 aaKnown RBP eCLIP4.12□□□□□ -1.75
CDC40-204ENST00000431461 SF3B2Q13435 895 aaKnown RBP4.12□□□□□ -1.75
CDC40-204ENST00000431461 MTMR3Q13615 1198 aa4.12□□□□□ -1.75
CDC40-204ENST00000431461 TMEM67Q5HYA8 995 aa4.12□□□□□ -1.75
CDC40-204ENST00000431461 CCDC97Q96F63 343 aaPredicted RBP4.12□□□□□ -1.75
CDC40-204ENST00000431461 C20orf173Q96LM9 149 aa4.12□□□□□ -1.75
CDC40-204ENST00000431461 DIRC2Q96SL1 478 aa4.12□□□□□ -1.75
CDC40-204ENST00000431461 WDR18Q9BV38 432 aa4.12□□□□□ -1.75
CDC40-204ENST00000431461 PIDD1Q9HB75 910 aa4.12□□□□□ -1.75
CDC40-204ENST00000431461 RNGTTO60942 597 aaKnown RBP4.11□□□□□ -1.75
CDC40-204ENST00000431461 HCLS1P14317 486 aaPredicted RBP4.11□□□□□ -1.75
CDC40-204ENST00000431461 PTPN12Q05209 780 aaKnown RBP4.11□□□□□ -1.75
CDC40-204ENST00000431461 ZP2Q05996 745 aa4.11□□□□□ -1.75
CDC40-204ENST00000431461 PDE4CQ08493 712 aa4.11□□□□□ -1.75
CDC40-204ENST00000431461 IKZF1Q13422 519 aa4.11□□□□□ -1.75
CDC40-204ENST00000431461 WDR89Q96FK6 387 aaPredicted RBP4.11□□□□□ -1.75
CDC40-204ENST00000431461 KIRREL1Q96J84 757 aa4.11□□□□□ -1.75
CDC40-204ENST00000431461 ZNF576Q9H609 170 aa4.11□□□□□ -1.75
CDC40-204ENST00000431461 PARD6AQ9NPB6 346 aa4.11□□□□□ -1.75
CDC40-204ENST00000431461 CCDC87Q9NVE4 849 aa4.11□□□□□ -1.75
CDC40-204ENST00000431461 PLAGL2Q9UPG8 496 aa4.11□□□□□ -1.75
CDC40-204ENST00000431461 TCAF2A6NFQ2 919 aa4.1□□□□□ -1.75
CDC40-204ENST00000431461 TMPRSS2O15393 492 aa4.1□□□□□ -1.75
CDC40-204ENST00000431461 FOXD2O60548 495 aaPredicted RBP4.1□□□□□ -1.75
CDC40-204ENST00000431461 SRFP11831 508 aa4.1□□□□□ -1.75
CDC40-204ENST00000431461 LIG1P18858 919 aa4.1□□□□□ -1.75
CDC40-204ENST00000431461 HNRNPUQ00839 825 aaKnown RBP eCLIP4.1□□□□□ -1.75
CDC40-204ENST00000431461 AP3B2Q13367 1082 aa4.1□□□□□ -1.75
CDC40-204ENST00000431461 CYFIP1Q7L576 1253 aa4.1□□□□□ -1.75
CDC40-204ENST00000431461 CCDC120Q96HB5 630 aa4.1□□□□□ -1.75
CDC40-204ENST00000431461 ATXN3LQ9H3M9 355 aa4.1□□□□□ -1.75
CDC40-204ENST00000431461 MTMR7Q9Y216 660 aa4.1□□□□□ -1.75
CDC40-204ENST00000431461 TMEM88BA6NKF7 163 aa4.09□□□□□ -1.75
CDC40-204ENST00000431461 IGF2BP3O00425 579 aaKnown RBP eCLIP4.09□□□□□ -1.75
CDC40-204ENST00000431461 NEFLP07196 543 aa4.09□□□□□ -1.75
CDC40-204ENST00000431461 SLFN14P0C7P3 912 aa4.09□□□□□ -1.75
CDC40-204ENST00000431461 SYN1P17600 705 aa4.09□□□□□ -1.75
CDC40-204ENST00000431461 ZNF157P51786 506 aaPredicted RBP4.09□□□□□ -1.75
CDC40-204ENST00000431461 ATG14Q6ZNE5 492 aa4.09□□□□□ -1.75
CDC40-204ENST00000431461 TOP6BLQ8N6T0 577 aa4.09□□□□□ -1.75
CDC40-204ENST00000431461 FANCD2OSQ96PS1 177 aa4.09□□□□□ -1.75
CDC40-204ENST00000431461 SUV39H1O43463 412 aa4.08□□□□□ -1.76
CDC40-204ENST00000431461 GDNFP39905 211 aa4.08□□□□□ -1.76
CDC40-204ENST00000431461 RPS26P11Q5JNZ5 115 aaPredicted RBP4.08□□□□□ -1.76
CDC40-204ENST00000431461 SMYD4Q8IYR2 804 aaPredicted RBP4.08□□□□□ -1.76
CDC40-204ENST00000431461 SLC26A8Q96RN1 970 aa4.08□□□□□ -1.76
CDC40-204ENST00000431461 DUSP23Q9BVJ7 150 aa4.08□□□□□ -1.76
CDC40-204ENST00000431461 NSUN3Q9H649 340 aaKnown RBP4.08□□□□□ -1.76
CDC40-204ENST00000431461 DISC1Q9NRI5 854 aa4.08□□□□□ -1.76
CDC40-204ENST00000431461 PCOLCE2Q9UKZ9 415 aa4.08□□□□□ -1.76
CDC40-204ENST00000431461 NUAK1O60285 661 aa4.07□□□□□ -1.76
CDC40-204ENST00000431461 ZNF862O60290 1169 aa4.07□□□□□ -1.76
CDC40-204ENST00000431461 PPP1R15AO75807 674 aaPredicted RBP4.07□□□□□ -1.76
CDC40-204ENST00000431461 ID3Q02535 119 aa4.07□□□□□ -1.76
CDC40-204ENST00000431461 TTLL4Q14679 1199 aa4.07□□□□□ -1.76
CDC40-204ENST00000431461 KIF4BQ2VIQ3 1234 aa4.07□□□□□ -1.76
CDC40-204ENST00000431461 USPL1Q5W0Q7 1092 aa4.07□□□□□ -1.76
CDC40-204ENST00000431461 GGNQ86UU5 652 aa4.07□□□□□ -1.76
CDC40-204ENST00000431461 EHD4Q9H223 541 aa4.07□□□□□ -1.76
CDC40-204ENST00000431461 EPB41L4BQ9H329 900 aa4.07□□□□□ -1.76
CDC40-204ENST00000431461 CCDC86Q9H6F5 360 aaKnown RBP4.07□□□□□ -1.76
CDC40-204ENST00000431461 SSU72Q9NP77 194 aaKnown RBP4.07□□□□□ -1.76
CDC40-204ENST00000431461 KRT82Q9NSB4 513 aa4.07□□□□□ -1.76
CDC40-204ENST00000431461 GTF2IRD1Q9UHL9 959 aa4.07□□□□□ -1.76
CDC40-204ENST00000431461 SMG5Q9UPR3 1016 aaKnown RBP4.07□□□□□ -1.76
CDC40-204ENST00000431461 PITPNM2Q9BZ72 1349 aa4.06□□□□□ -1.76
CDC40-204ENST00000431461 CLCN7P51798 805 aa4.06□□□□□ -1.76
CDC40-204ENST00000431461 LINC00310P59036 64 aa4.06□□□□□ -1.76
CDC40-204ENST00000431461 PHLDB3Q6NSJ2 640 aa4.06□□□□□ -1.76
CDC40-204ENST00000431461 LSRQ86X29 649 aaPredicted RBP4.06□□□□□ -1.76
CDC40-204ENST00000431461 CXorf38Q8TB03 319 aa4.06□□□□□ -1.76
CDC40-204ENST00000431461 DCP1AQ9NPI6 582 aaPredicted RBP4.06□□□□□ -1.76
CDC40-204ENST00000431461 PCDHGC5Q9Y5F6 944 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms